RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 PCBP1Q15365 356 aaKnown RBP eCLIP13.61□□□□□ -0.231e-15■■■■■ 80.2
CPSF7-223ENST00000544669 GTF2F1P35269 517 aaKnown RBP eCLIP15.27■□□□□ 0.045e-10■■■■■ 57.2
CPSF7-223ENST00000544669 AQRO60306 1485 aaKnown RBP eCLIP19.02■□□□□ 0.643e-7■■■■■ 40.5
CPSF7-223ENST00000544669 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.52□□□□□ -0.254e-6■■■■■ 36.6
CPSF7-223ENST00000544669 PRPF4O43172 522 aaKnown RBP eCLIP13.77□□□□□ -0.219e-7■■■■■ 34.9
CPSF7-223ENST00000544669 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.46□□□□□ -0.425e-8■■■■■ 34.6
CPSF7-223ENST00000544669 EFTUD2Q15029 972 aaKnown RBP eCLIP13.5□□□□□ -0.252e-7■■■■■ 34.4
CPSF7-223ENST00000544669 SF3B4Q15427 424 aaKnown RBP eCLIP12.11□□□□□ -0.471e-9■■■■■ 29.1
CPSF7-223ENST00000544669 SF3B1O75533 1304 aaKnown RBP eCLIP13.51□□□□□ -0.257e-6■■■■■ 28.7
CPSF7-223ENST00000544669 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.74□□□□□ -0.218e-9■■■■■ 27.8
CPSF7-223ENST00000544669 RBM22Q9NW64 420 aaKnown RBP eCLIP13.18□□□□□ -0.31e-6■■■■□ 23.9
CPSF7-223ENST00000544669 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.22□□□□□ -0.132e-7■■■■□ 22.5
CPSF7-223ENST00000544669 PCBP2Q15366 365 aaKnown RBP eCLIP12.93□□□□□ -0.349e-7■■■■□ 22
CPSF7-223ENST00000544669 GPKOWQ92917 476 aaPredicted RBP eCLIP14.6□□□□□ -0.073e-7■■■■□ 21.6
CPSF7-223ENST00000544669 ILF3Q12906 894 aaKnown RBP eCLIP12.11□□□□□ -0.472e-6■■■■□ 21.5
CPSF7-223ENST00000544669 TIAL1Q01085 375 aaKnown RBP eCLIP12.95□□□□□ -0.345e-6■■■■□ 21
CPSF7-223ENST00000544669 DDX3XO00571 662 aaKnown RBP eCLIP14.15□□□□□ -0.141e-6■■■■□ 20.9
CPSF7-223ENST00000544669 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.51□□□□□ -0.891e-7■■■□□ 17.2
CPSF7-223ENST00000544669 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.31■□□□□ 0.044e-7■■■□□ 16.7
CPSF7-223ENST00000544669 PPIGQ13427 754 aaKnown RBP eCLIP12.53□□□□□ -0.47e-8■■■□□ 16.3
CPSF7-223ENST00000544669 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.12□□□□□ -0.313e-8■■■□□ 15.8
CPSF7-223ENST00000544669 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.72■□□□□ 0.114e-9■■■□□ 15.2
CPSF7-223ENST00000544669 U2AF2P26368 475 aaKnown RBP eCLIP15.08■□□□□ 09e-9■■■□□ 15
CPSF7-223ENST00000544669 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.51□□□□□ -0.417e-16■■□□□ 13
CPSF7-223ENST00000544669 HNRNPKP61978 463 aaKnown RBP eCLIP11.83□□□□□ -0.511e-8■■□□□ 12.8
CPSF7-223ENST00000544669 NCBP2P52298 156 aaKnown RBP eCLIP12.32□□□□□ -0.442e-6■■□□□ 12.6
CPSF7-223ENST00000544669 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.85□□□□□ -0.034e-11■■□□□ 12.6
CPSF7-223ENST00000544669 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.49□□□□□ -0.255e-9■■□□□ 12.4
CPSF7-223ENST00000544669 SF3A3Q12874 501 aaKnown RBP eCLIP13.56□□□□□ -0.249e-6■■□□□ 12.4
CPSF7-223ENST00000544669 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.16□□□□□ -0.468e-9■■□□□ 12.1
CPSF7-223ENST00000544669 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.99■□□□□ 0.631e-11■■□□□ 12.1
CPSF7-223ENST00000544669 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.49■□□□□ 0.392e-8■■□□□ 11.7
CPSF7-223ENST00000544669 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.2□□□□□ -0.148e-6■■□□□ 11.4
CPSF7-223ENST00000544669 YBX3P16989 372 aaKnown RBP eCLIP13.28□□□□□ -0.282e-7■□□□□ 10.4
CPSF7-223ENST00000544669 RBFOX2O43251 390 aaKnown RBP eCLIP10.95□□□□□ -0.664e-7■□□□□ 10.3
CPSF7-223ENST00000544669 ZNF622Q969S3 477 aaKnown RBP eCLIP14.21□□□□□ -0.132e-6■□□□□ 9.3
Retrieved 36 of 36 RNA–protein pairs in 9 ms