RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 ID3Q02535 119 aa3.96□□□□□ -1.78
SMAD3-209ENST00000558894 PPP1R1AQ13522 171 aa3.96□□□□□ -1.78
SMAD3-209ENST00000558894 COTL1Q14019 142 aa3.96□□□□□ -1.78
SMAD3-209ENST00000558894 CFAP161Q6P656 301 aa3.96□□□□□ -1.78
SMAD3-209ENST00000558894 AMTNQ6UX39 209 aa3.96□□□□□ -1.78
SMAD3-209ENST00000558894 NOXA1Q86UR1 476 aa3.96□□□□□ -1.78
SMAD3-209ENST00000558894 C1orf158Q8N1D5 194 aa3.96□□□□□ -1.78
SMAD3-209ENST00000558894 SCGB3A2Q96PL1 93 aa3.96□□□□□ -1.78
SMAD3-209ENST00000558894 NEU1Q99519 415 aa3.96□□□□□ -1.78
SMAD3-209ENST00000558894 TRGV9Q99603 122 aa3.96□□□□□ -1.78
SMAD3-209ENST00000558894 SRRQ9GZT4 340 aa3.96□□□□□ -1.78
SMAD3-209ENST00000558894 MCUBQ9NWR8 336 aa3.96□□□□□ -1.78
SMAD3-209ENST00000558894 XCL2Q9UBD3 114 aa3.96□□□□□ -1.78
SMAD3-209ENST00000558894 DNAH5Q8TE73 4624 aa3.96□□□□□ -1.78
SMAD3-209ENST00000558894 TRAV10A0A0B4J240 114 aa3.95□□□□□ -1.78
SMAD3-209ENST00000558894 A0A0J9YX75 114 aa3.95□□□□□ -1.78
SMAD3-209ENST00000558894 ZFP92A6NM28 416 aa3.95□□□□□ -1.78
SMAD3-209ENST00000558894 CRXO43186 299 aaPredicted RBP3.95□□□□□ -1.78
SMAD3-209ENST00000558894 SYNGR2O43760 224 aa3.95□□□□□ -1.78
SMAD3-209ENST00000558894 SCGB2A1O75556 95 aa3.95□□□□□ -1.78
SMAD3-209ENST00000558894 ADAP1O75689 374 aa3.95□□□□□ -1.78
SMAD3-209ENST00000558894 AMBPP02760 352 aa3.95□□□□□ -1.78
SMAD3-209ENST00000558894 IAPPP10997 89 aa3.95□□□□□ -1.78
SMAD3-209ENST00000558894 ANXA3P12429 323 aa3.95□□□□□ -1.78
SMAD3-209ENST00000558894 GATA2P23769 480 aaPredicted RBP3.95□□□□□ -1.78
SMAD3-209ENST00000558894 PSMB3P49720 205 aa3.95□□□□□ -1.78
SMAD3-209ENST00000558894 SNRPD3P62318 126 aaKnown RBP3.95□□□□□ -1.78
SMAD3-209ENST00000558894 SRPXP78539 464 aa3.95□□□□□ -1.78
SMAD3-209ENST00000558894 OR2F1Q13607 317 aa3.95□□□□□ -1.78
SMAD3-209ENST00000558894 BAK1Q16611 211 aa3.95□□□□□ -1.78
SMAD3-209ENST00000558894 LBHQ53QV2 105 aaPredicted RBP3.95□□□□□ -1.78
SMAD3-209ENST00000558894 C1orf194Q5T5A4 169 aa3.95□□□□□ -1.78
SMAD3-209ENST00000558894 PXDC1Q5TGL8 231 aa3.95□□□□□ -1.78
SMAD3-209ENST00000558894 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.95□□□□□ -1.78
SMAD3-209ENST00000558894 FOXI2Q6ZQN5 318 aa3.95□□□□□ -1.78
SMAD3-209ENST00000558894 TMED4Q7Z7H5 227 aa3.95□□□□□ -1.78
SMAD3-209ENST00000558894 TOMM5Q8N4H5 51 aa3.95□□□□□ -1.78
SMAD3-209ENST00000558894 OR1S1Q8NH92 325 aa3.95□□□□□ -1.78
SMAD3-209ENST00000558894 DEDD2Q8WXF8 326 aa3.95□□□□□ -1.78
SMAD3-209ENST00000558894 NARS2Q96I59 477 aaKnown RBP3.95□□□□□ -1.78
SMAD3-209ENST00000558894 SLC25A21Q9BQT8 299 aaPredicted RBP3.95□□□□□ -1.78
SMAD3-209ENST00000558894 RNF126Q9BV68 326 aa3.95□□□□□ -1.78
SMAD3-209ENST00000558894 MAGT1Q9H0U3 335 aa3.95□□□□□ -1.78
SMAD3-209ENST00000558894 SLC35B3Q9H1N7 401 aa3.95□□□□□ -1.78
SMAD3-209ENST00000558894 SLC25A32Q9H2D1 315 aa3.95□□□□□ -1.78
SMAD3-209ENST00000558894 TMED3Q9Y3Q3 217 aa3.95□□□□□ -1.78
SMAD3-209ENST00000558894 HSPG2P98160 4391 aa3.94□□□□□ -1.78
SMAD3-209ENST00000558894 APOBP04114 4563 aaKnown RBP3.94□□□□□ -1.78
SMAD3-209ENST00000558894 DEFB131BA0A096LNP1 70 aa3.94□□□□□ -1.78
SMAD3-209ENST00000558894 C9orf170A2RU37 121 aa3.94□□□□□ -1.78
SMAD3-209ENST00000558894 SMIM9A6NGZ8 99 aa3.94□□□□□ -1.78
SMAD3-209ENST00000558894 PCP4L1A6NKN8 68 aa3.94□□□□□ -1.78
SMAD3-209ENST00000558894 SNRPGP15A8MWD9 76 aa3.94□□□□□ -1.78
SMAD3-209ENST00000558894 ISLRO14498 428 aa3.94□□□□□ -1.78
SMAD3-209ENST00000558894 MRPS12O15235 138 aaKnown RBP3.94□□□□□ -1.78
SMAD3-209ENST00000558894 CCNKO75909 580 aa3.94□□□□□ -1.78
SMAD3-209ENST00000558894 IGKV3-20P01619 116 aa3.94□□□□□ -1.78
SMAD3-209ENST00000558894 HOXB5P09067 269 aa3.94□□□□□ -1.78
SMAD3-209ENST00000558894 SMIM6P0DI80 62 aa3.94□□□□□ -1.78
SMAD3-209ENST00000558894 NKX2-5P52952 324 aaPredicted RBP3.94□□□□□ -1.78
SMAD3-209ENST00000558894 FXYD7P58549 80 aa3.94□□□□□ -1.78
SMAD3-209ENST00000558894 ZFP69Q49AA0 526 aa3.94□□□□□ -1.78
SMAD3-209ENST00000558894 PYDC2Q56P42 97 aa3.94□□□□□ -1.78
SMAD3-209ENST00000558894 TOR2AQ5JU69 321 aa3.94□□□□□ -1.78
SMAD3-209ENST00000558894 FAM78BQ5VT40 261 aa3.94□□□□□ -1.78
SMAD3-209ENST00000558894 GGNBP1Q5YKI7 109 aa3.94□□□□□ -1.78
SMAD3-209ENST00000558894 OR4D5Q8NGN0 318 aa3.94□□□□□ -1.78
SMAD3-209ENST00000558894 SLC35E1Q96K37 410 aa3.94□□□□□ -1.78
SMAD3-209ENST00000558894 PBDC1Q9BVG4 233 aa3.94□□□□□ -1.78
SMAD3-209ENST00000558894 C1QTNF4Q9BXJ3 329 aa3.94□□□□□ -1.78
SMAD3-209ENST00000558894 DKK2Q9UBU2 259 aa3.94□□□□□ -1.78
SMAD3-209ENST00000558894 SLC45A2Q9UMX9 530 aa3.94□□□□□ -1.78
SMAD3-209ENST00000558894 FLVCR2Q9UPI3 526 aa3.94□□□□□ -1.78
SMAD3-209ENST00000558894 LRP1BQ9NZR2 4599 aa3.94□□□□□ -1.78
SMAD3-209ENST00000558894 PLAC8L1A1L4L8 177 aa3.93□□□□□ -1.78
SMAD3-209ENST00000558894 H3BP45 60 aa3.93□□□□□ -1.78
SMAD3-209ENST00000558894 RTL8CO15255 209 aa3.93□□□□□ -1.78
SMAD3-209ENST00000558894 NDUFB6O95139 128 aa3.93□□□□□ -1.78
SMAD3-209ENST00000558894 PRM2P04554 102 aa3.93□□□□□ -1.78
SMAD3-209ENST00000558894 S100A8P05109 93 aa3.93□□□□□ -1.78
SMAD3-209ENST00000558894 FAUP35544 74 aaKnown RBP3.93□□□□□ -1.78
SMAD3-209ENST00000558894 NUP62P37198 522 aaPredicted RBP3.93□□□□□ -1.78
SMAD3-209ENST00000558894 DEFA1P59665 94 aa3.93□□□□□ -1.78
SMAD3-209ENST00000558894 DEFA3P59666 94 aa3.93□□□□□ -1.78
SMAD3-209ENST00000558894 PLP1P60201 277 aa3.93□□□□□ -1.78
SMAD3-209ENST00000558894 UBE2MP61081 183 aaKnown RBP3.93□□□□□ -1.78
SMAD3-209ENST00000558894 LYZP61626 148 aa3.93□□□□□ -1.78
SMAD3-209ENST00000558894 RAB11AP62491 216 aa3.93□□□□□ -1.78
SMAD3-209ENST00000558894 ARL16Q0P5N6 197 aa3.93□□□□□ -1.78
SMAD3-209ENST00000558894 IGFL4Q6B9Z1 124 aa3.93□□□□□ -1.78
SMAD3-209ENST00000558894 TMEM14EPQ6UXP3 125 aa3.93□□□□□ -1.78
SMAD3-209ENST00000558894 PATE2Q6UY27 113 aa3.93□□□□□ -1.78
SMAD3-209ENST00000558894 Q6ZR54 194 aa3.93□□□□□ -1.78
SMAD3-209ENST00000558894 ACOT7LQ6ZUV0 252 aa3.93□□□□□ -1.78
SMAD3-209ENST00000558894 LINC00052Q96N35 136 aa3.93□□□□□ -1.78
SMAD3-209ENST00000558894 C12orf57Q99622 126 aa3.93□□□□□ -1.78
SMAD3-209ENST00000558894 TCEAL7Q9BRU2 100 aa3.93□□□□□ -1.78
SMAD3-209ENST00000558894 RSG1Q9BU20 258 aa3.93□□□□□ -1.78
SMAD3-209ENST00000558894 PIGBOS1A0A0B4J2F0 54 aa3.92□□□□□ -1.78
SMAD3-209ENST00000558894 H3BRN7 92 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms