RNA–Protein interactions for RNA: YPL010W

RET3, Transcript of Zeta subunit of the coatomer complex (COPI), yeastyeast

Gene RET3, Length 570 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RET3YPL010W YOR111WQ99210 232 aa4.5□□□□□ -1.69
RET3YPL010W PGK1P00560 416 aaKnown RBP4.49□□□□□ -1.69
RET3YPL010W SNF1P06782 633 aaKnown RBP4.49□□□□□ -1.69
RET3YPL010W PEP3P27801 918 aa4.49□□□□□ -1.69
RET3YPL010W RFS1P38234 210 aaKnown RBP4.49□□□□□ -1.69
RET3YPL010W RXT2P38255 430 aa4.49□□□□□ -1.69
RET3YPL010W YHL026CP38740 315 aa4.49□□□□□ -1.69
RET3YPL010W YHR202WP38887 602 aa4.49□□□□□ -1.69
RET3YPL010W ORC4P54791 529 aa4.49□□□□□ -1.69
RET3YPL010W CSM3Q04659 317 aa4.49□□□□□ -1.69
RET3YPL010W SMC5Q08204 1093 aa4.49□□□□□ -1.69
RET3YPL010W MRN1Q08925 612 aaKnown RBP RIP-Chip data4.49□□□□□ -1.69not detected
RET3YPL010W RPS9AO13516 197 aaKnown RBP4.48□□□□□ -1.69
RET3YPL010W WHI2P12611 486 aa4.48□□□□□ -1.69
RET3YPL010W PUP3P25451 205 aaKnown RBP4.48□□□□□ -1.69
RET3YPL010W SAS3P34218 831 aa4.48□□□□□ -1.69
RET3YPL010W AAP1P37898 856 aaKnown RBP4.48□□□□□ -1.69
RET3YPL010W SDP1P40479 209 aa4.48□□□□□ -1.69
RET3YPL010W CCM1P48237 864 aaPredicted RBP4.48□□□□□ -1.69
RET3YPL010W TPO2P53283 614 aa4.48□□□□□ -1.69
RET3YPL010W BNI5P53890 448 aaKnown RBP4.48□□□□□ -1.69
RET3YPL010W OMS1Q06668 471 aa4.48□□□□□ -1.69
RET3YPL010W APE1P14904 514 aa4.47□□□□□ -1.69
RET3YPL010W AAR2P32357 355 aaPredicted RBP4.47□□□□□ -1.69
RET3YPL010W UBP11P36026 717 aa4.47□□□□□ -1.69
RET3YPL010W CTF8P38877 133 aa4.47□□□□□ -1.69
RET3YPL010W SPF1P39986 1215 aaKnown RBP4.47□□□□□ -1.69
RET3YPL010W EAF5P39995 279 aa4.47□□□□□ -1.69
RET3YPL010W SAD1P43589 448 aa4.47□□□□□ -1.69
RET3YPL010W UBA2P52488 636 aa4.47□□□□□ -1.69
RET3YPL010W RNT1Q02555 471 aa4.47□□□□□ -1.69
RET3YPL010W MFB1Q04922 465 aa4.47□□□□□ -1.69
RET3YPL010W JIP5Q06214 492 aaPredicted RBP4.47□□□□□ -1.69
RET3YPL010W MRI1Q06489 411 aaKnown RBP4.47□□□□□ -1.69
RET3YPL010W SDH5Q08230 162 aa4.47□□□□□ -1.69
RET3YPL010W RRD2Q12461 358 aa4.47□□□□□ -1.69
RET3YPL010W ECM29P38737 1868 aa4.47□□□□□ -1.69
RET3YPL010W FAB1P34756 2278 aa4.47□□□□□ -1.69
RET3YPL010W CAN1P04817 590 aa4.46□□□□□ -1.7
RET3YPL010W STI1P15705 589 aaKnown RBP RIP-Chip data4.46□□□□□ -1.7not detected
RET3YPL010W ADE2P21264 571 aaKnown RBP4.46□□□□□ -1.7
RET3YPL010W OPY1P38271 328 aa4.46□□□□□ -1.7
RET3YPL010W ARP1P38696 384 aa4.46□□□□□ -1.7
RET3YPL010W LAM5P43560 674 aa4.46□□□□□ -1.7
RET3YPL010W YGL081WP53156 320 aa4.46□□□□□ -1.7
RET3YPL010W NPL3Q01560 414 aaKnown RBP RIP-Chip data4.46□□□□□ -1.7not detected
RET3YPL010W SMD2Q06217 110 aaKnown RBP4.46□□□□□ -1.7
RET3YPL010W SGO1Q08490 590 aa4.46□□□□□ -1.7
RET3YPL010W RAD50P12753 1312 aa4.46□□□□□ -1.7
RET3YPL010W MET6P05694 767 aaKnown RBP4.45□□□□□ -1.7
RET3YPL010W PPR1P07272 904 aaPredicted RBP4.45□□□□□ -1.7
RET3YPL010W CLN3P13365 580 aa4.45□□□□□ -1.7
RET3YPL010W PRP9P19736 530 aaKnown RBP4.45□□□□□ -1.7
RET3YPL010W PRI2P20457 528 aa4.45□□□□□ -1.7
RET3YPL010W HBS1P32769 611 aaKnown RBP4.45□□□□□ -1.7
RET3YPL010W CSE2P33308 149 aa4.45□□□□□ -1.7
RET3YPL010W CCL1P37366 393 aa4.45□□□□□ -1.7
RET3YPL010W YRO2P38079 344 aa4.45□□□□□ -1.7
RET3YPL010W VID28P40547 921 aa4.45□□□□□ -1.7
RET3YPL010W MAF1P41910 395 aa4.45□□□□□ -1.7
RET3YPL010W GPD2P41911 440 aaKnown RBP4.45□□□□□ -1.7
RET3YPL010W QRI1P43123 477 aaKnown RBP4.45□□□□□ -1.7
RET3YPL010W SSL1Q04673 461 aaPredicted RBP4.45□□□□□ -1.7
RET3YPL010W COQ9Q05779 260 aa4.45□□□□□ -1.7
RET3YPL010W ACF2Q12168 779 aa4.45□□□□□ -1.7
RET3YPL010W ILV1P00927 576 aaKnown RBP4.44□□□□□ -1.7
RET3YPL010W HMG2P12684 1045 aa4.44□□□□□ -1.7
RET3YPL010W KGD2P19262 463 aaPredicted RBP4.44□□□□□ -1.7
RET3YPL010W TMT1P32643 299 aa4.44□□□□□ -1.7
RET3YPL010W STE5P32917 917 aa4.44□□□□□ -1.7
RET3YPL010W YKL097CP34245 136 aa4.44□□□□□ -1.7
RET3YPL010W CTF13P35203 478 aa4.44□□□□□ -1.7
RET3YPL010W RIM4P38741 713 aa4.44□□□□□ -1.7
RET3YPL010W FMO1P38866 432 aa4.44□□□□□ -1.7
RET3YPL010W YTA12P40341 825 aa4.44□□□□□ -1.7
RET3YPL010W YIR016WP40572 265 aa4.44□□□□□ -1.7
RET3YPL010W MFM1Q02783 413 aa4.44□□□□□ -1.7
RET3YPL010W AIM33Q04516 312 aa4.44□□□□□ -1.7
RET3YPL010W TMN2Q04562 672 aa4.44□□□□□ -1.7
RET3YPL010W PEX19Q07418 342 aa4.44□□□□□ -1.7
RET3YPL010W MCH5Q08777 521 aa4.44□□□□□ -1.7
RET3YPL010W PKH2Q12236 1081 aaKnown RBP4.44□□□□□ -1.7
RET3YPL010W PGA3Q12746 312 aaKnown RBP4.44□□□□□ -1.7
RET3YPL010W ATP1P07251 545 aaKnown RBP4.43□□□□□ -1.7
RET3YPL010W ALG7P07286 448 aa4.43□□□□□ -1.7
RET3YPL010W RPL40AP0CH08 128 aaKnown RBP4.43□□□□□ -1.7
RET3YPL010W RPL40BP0CH09 128 aaKnown RBP4.43□□□□□ -1.7
RET3YPL010W RSA4P25382 515 aaKnown RBP4.43□□□□□ -1.7
RET3YPL010W DPH2P32461 534 aa4.43□□□□□ -1.7
RET3YPL010W VPH1P32563 840 aaKnown RBP4.43□□□□□ -1.7
RET3YPL010W PRS1P32895 427 aaKnown RBP4.43□□□□□ -1.7
RET3YPL010W SKG6P32900 734 aaPredicted RBP4.43□□□□□ -1.7
RET3YPL010W BMH2P34730 273 aaKnown RBP4.43□□□□□ -1.7
RET3YPL010W TOK1P40310 691 aa4.43□□□□□ -1.7
RET3YPL010W SPO22P40511 975 aa4.43□□□□□ -1.7
RET3YPL010W PCI8P40512 444 aa4.43□□□□□ -1.7
RET3YPL010W FIS1P40515 155 aa4.43□□□□□ -1.7
RET3YPL010W PFD1P46988 109 aa4.43□□□□□ -1.7
RET3YPL010W BFA1P47113 574 aa4.43□□□□□ -1.7
RET3YPL010W YGL138CP53122 345 aa4.43□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms