RNA–Protein interactions for RNA: YOR359W

VTS1, Transcript of Flap-structured DNA-binding and RNA-binding protein, yeast

Gene VTS1, Length 1,572 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTS1	YOR359W	ALD5	P40047	520 aa	Known RBP	6.99	□□□□□ -1.29
VTS1	YOR359W	EMP65	P40085	556 aa		6.99	□□□□□ -1.29
VTS1	YOR359W	AGE2	P40529	298 aa		6.99	□□□□□ -1.29
VTS1	YOR359W	BUD6	P41697	788 aa		6.99	□□□□□ -1.29
VTS1	YOR359W	CNN1	P43618	361 aa		6.99	□□□□□ -1.29
VTS1	YOR359W	VPS70	P47161	811 aa		6.99	□□□□□ -1.29
VTS1	YOR359W	ERG5	P54781	538 aa		6.99	□□□□□ -1.29
VTS1	YOR359W	NGL3	Q03210	505 aa		6.99	□□□□□ -1.29
VTS1	YOR359W	NSE5	Q03718	556 aa		6.99	□□□□□ -1.29
VTS1	YOR359W	BUD22	Q04347	519 aa	Known RBP	6.99	□□□□□ -1.29
VTS1	YOR359W	RTR2	Q12378	196 aa		6.99	□□□□□ -1.29
VTS1	YOR359W	NSI1	Q12457	570 aa		6.99	□□□□□ -1.29
VTS1	YOR359W	KAR2	P16474	682 aa	Known RBP	6.98	□□□□□ -1.29
VTS1	YOR359W	GLK1	P17709	500 aa	Known RBP	6.98	□□□□□ -1.29
VTS1	YOR359W	YKR078W	P36158	585 aa	Known RBP	6.98	□□□□□ -1.29
VTS1	YOR359W	OAF1	P39720	1047 aa	Predicted RBP	6.98	□□□□□ -1.29
VTS1	YOR359W	PSP1	P50896	841 aa	Known RBP	6.98	□□□□□ -1.29
VTS1	YOR359W	UTP8	P53276	713 aa	Known RBP	6.98	□□□□□ -1.29
VTS1	YOR359W	VAC7	P53950	1165 aa		6.98	□□□□□ -1.29
VTS1	YOR359W	ZDS2	P54786	942 aa		6.98	□□□□□ -1.29
VTS1	YOR359W	RMI1	Q02685	241 aa		6.98	□□□□□ -1.29
VTS1	YOR359W	LGE1	Q02796	332 aa	Known RBP	6.98	□□□□□ -1.29
VTS1	YOR359W	URC2	Q04411	772 aa		6.98	□□□□□ -1.29
VTS1	YOR359W	LOT6	Q07923	191 aa		6.98	□□□□□ -1.29
VTS1	YOR359W	MED2	Q12124	431 aa		6.98	□□□□□ -1.29
VTS1	YOR359W	MAM3	Q12296	706 aa		6.98	□□□□□ -1.29
VTS1	YOR359W	MDM20	Q12387	796 aa	Known RBP	6.98	□□□□□ -1.29
VTS1	YOR359W	YOS9	Q99220	542 aa		6.98	□□□□□ -1.29
VTS1	YOR359W	SPO14	P36126	1683 aa		6.98	□□□□□ -1.29
VTS1	YOR359W	NUP188	P52593	1655 aa	Known RBP	6.98	□□□□□ -1.29
VTS1	YOR359W	ATP6	P00854	259 aa		6.97	□□□□□ -1.29
VTS1	YOR359W	ADE8	P04161	214 aa		6.97	□□□□□ -1.29
VTS1	YOR359W	CHO2	P05374	869 aa	Known RBP	6.97	□□□□□ -1.29
VTS1	YOR359W	YGL041W-A	P0C5N3	154 aa		6.97	□□□□□ -1.29
VTS1	YOR359W	MPH2	P0CD99	609 aa		6.97	□□□□□ -1.29
VTS1	YOR359W	MTF2	P10849	440 aa		6.97	□□□□□ -1.29
VTS1	YOR359W	PYC1	P11154	1178 aa	Known RBP	6.97	□□□□□ -1.29
VTS1	YOR359W	YAK1	P14680	807 aa		6.97	□□□□□ -1.29
VTS1	YOR359W	NCP1	P16603	691 aa	Known RBP	6.97	□□□□□ -1.29
VTS1	YOR359W	RDS2	P19541	446 aa	Known RBP	6.97	□□□□□ -1.29
VTS1	YOR359W	GCD11	P32481	527 aa	Known RBP	6.97	□□□□□ -1.29
VTS1	YOR359W	MRS6	P32864	603 aa	Known RBP	6.97	□□□□□ -1.29
VTS1	YOR359W	POP7	P38291	140 aa		6.97	□□□□□ -1.29
VTS1	YOR359W	YAP3	P38749	330 aa		6.97	□□□□□ -1.29
VTS1	YOR359W	SEC31	P38968	1273 aa	Known RBP	6.97	□□□□□ -1.29
VTS1	YOR359W	MSS4	P38994	779 aa		6.97	□□□□□ -1.29
VTS1	YOR359W	TED1	P40533	473 aa		6.97	□□□□□ -1.29
VTS1	YOR359W	BNA6	P43619	295 aa		6.97	□□□□□ -1.29
VTS1	YOR359W	ENT3	P47160	408 aa		6.97	□□□□□ -1.29
VTS1	YOR359W	CLU1	Q03690	1277 aa	Known RBP	6.97	□□□□□ -1.29
VTS1	YOR359W	YPD1	Q07688	167 aa		6.97	□□□□□ -1.29
VTS1	YOR359W	RSF2	P46974	1380 aa		6.97	□□□□□ -1.29
VTS1	YOR359W	NUP192	P47054	1683 aa		6.96	□□□□□ -1.29
VTS1	YOR359W	STE12	P13574	688 aa		6.96	□□□□□ -1.29
VTS1	YOR359W	PRP5	P21372	849 aa	Predicted RBP	6.96	□□□□□ -1.29
VTS1	YOR359W	RPS5	P26783	225 aa	Known RBP	6.96	□□□□□ -1.29
VTS1	YOR359W	RPT5	P33297	434 aa	Known RBP	6.96	□□□□□ -1.29
VTS1	YOR359W	YBL055C	P34220	418 aa	Predicted RBP	6.96	□□□□□ -1.29
VTS1	YOR359W	PFF1	P38244	976 aa		6.96	□□□□□ -1.29
VTS1	YOR359W	RXT2	P38255	430 aa		6.96	□□□□□ -1.29
VTS1	YOR359W	ELP2	P42935	788 aa		6.96	□□□□□ -1.29
VTS1	YOR359W	LSM1	P47017	172 aa	Known RBP	6.96	□□□□□ -1.29
VTS1	YOR359W	YMR114C	Q04471	368 aa	Known RBP	6.96	□□□□□ -1.29
VTS1	YOR359W	HCR1	Q05775	265 aa	Known RBP	6.96	□□□□□ -1.29
VTS1	YOR359W	IRC3	Q06683	689 aa		6.96	□□□□□ -1.29
VTS1	YOR359W	YLL007C	Q07799	665 aa		6.96	□□□□□ -1.29
VTS1	YOR359W	CKA2	P19454	339 aa		6.95	□□□□□ -1.3
VTS1	YOR359W	SFL1	P20134	766 aa		6.95	□□□□□ -1.3
VTS1	YOR359W	DBP5	P20449	482 aa	Known RBP	6.95	□□□□□ -1.3
VTS1	YOR359W	ACE2	P21192	770 aa		6.95	□□□□□ -1.3
VTS1	YOR359W	ATP12	P22135	325 aa		6.95	□□□□□ -1.3
VTS1	YOR359W	RSC6	P25632	483 aa		6.95	□□□□□ -1.3
VTS1	YOR359W	NAT2	P37293	288 aa		6.95	□□□□□ -1.3
VTS1	YOR359W	RDH54	P38086	958 aa		6.95	□□□□□ -1.3
VTS1	YOR359W	GRS1	P38088	690 aa	Known RBP	6.95	□□□□□ -1.3
VTS1	YOR359W	ECM31	P38122	312 aa		6.95	□□□□□ -1.3
VTS1	YOR359W	IES5	P40060	125 aa		6.95	□□□□□ -1.3
VTS1	YOR359W	CKB1	P43639	278 aa		6.95	□□□□□ -1.3
VTS1	YOR359W	YJL181W	P46987	611 aa		6.95	□□□□□ -1.3
VTS1	YOR359W	LSM8	P47093	109 aa	Known RBP	6.95	□□□□□ -1.3
VTS1	YOR359W	FOX2	Q02207	900 aa	Known RBP	6.95	□□□□□ -1.3
VTS1	YOR359W	RPL6A	Q02326	176 aa	Known RBP	6.95	□□□□□ -1.3
VTS1	YOR359W	TRE1	Q08919	783 aa		6.95	□□□□□ -1.3
VTS1	YOR359W	TMA46	Q12000	345 aa	Known RBP	6.95	□□□□□ -1.3
VTS1	YOR359W	CMC2	Q3E7A4	109 aa		6.95	□□□□□ -1.3
VTS1	YOR359W	VMR1	P38735	1592 aa		6.95	□□□□□ -1.3
VTS1	YOR359W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	6.95	□□□□□ -1.3	not detected
VTS1	YOR359W	MRPL33	P20084	86 aa		6.95	□□□□□ -1.3
VTS1	YOR359W	ILV6	P25605	309 aa	Known RBP	6.95	□□□□□ -1.3
VTS1	YOR359W	PRR1	P28708	518 aa		6.95	□□□□□ -1.3
VTS1	YOR359W	KIP2	P28743	706 aa		6.95	□□□□□ -1.3
VTS1	YOR359W	DOA4	P32571	926 aa		6.95	□□□□□ -1.3
VTS1	YOR359W	GRX4	P32642	244 aa		6.95	□□□□□ -1.3
VTS1	YOR359W	PEX6	P33760	1030 aa		6.95	□□□□□ -1.3
VTS1	YOR359W	CLG1	P35190	452 aa		6.95	□□□□□ -1.3
VTS1	YOR359W	YPT52	P36018	234 aa	Known RBP	6.95	□□□□□ -1.3
VTS1	YOR359W	KTR4	P38131	464 aa		6.95	□□□□□ -1.3
VTS1	YOR359W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	6.95	□□□□□ -1.3	not detected
VTS1	YOR359W	VMA7	P39111	118 aa		6.95	□□□□□ -1.3
VTS1	YOR359W	SMX2	P40204	77 aa	Known RBP	6.95	□□□□□ -1.3

Retrieved 100 of 5,963 RNA–protein pairs in 148 ms