RNA–Protein interactions for RNA: YOR115C

TRS33, Transcript of Core component of transport protein particle (TRAPP) complexes I-III, yeast

Gene TRS33, Length 807 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRS33	YOR115C	YDR278C	Q05612	105 aa		5.2	□□□□□ -1.58
TRS33	YOR115C	YLR297W	Q05899	129 aa		5.2	□□□□□ -1.58
TRS33	YOR115C	RUD3	Q12234	484 aa	Known RBP	5.2	□□□□□ -1.58
TRS33	YOR115C	YLL054C	Q12244	843 aa		5.2	□□□□□ -1.58
TRS33	YOR115C	TY4B-P	A0A0B7P3V8	1104 aa		5.19	□□□□□ -1.58
TRS33	YOR115C	ARG4	P04076	463 aa	Predicted RBP	5.19	□□□□□ -1.58
TRS33	YOR115C	YER152C	P10356	443 aa		5.19	□□□□□ -1.58
TRS33	YOR115C	SAM1	P10659	382 aa	Known RBP	5.19	□□□□□ -1.58
TRS33	YOR115C	CLN3	P13365	580 aa		5.19	□□□□□ -1.58
TRS33	YOR115C	CHS2	P14180	963 aa		5.19	□□□□□ -1.58
TRS33	YOR115C	HPR1	P17629	752 aa	Known RBP	5.19	□□□□□ -1.58
TRS33	YOR115C	MSM1	P22438	575 aa		5.19	□□□□□ -1.58
TRS33	YOR115C	PRP22	P24384	1145 aa	Known RBP	5.19	□□□□□ -1.58
TRS33	YOR115C	CDC11	P32458	415 aa		5.19	□□□□□ -1.58
TRS33	YOR115C	AFR1	P33304	620 aa		5.19	□□□□□ -1.58
TRS33	YOR115C	YKL050C	P35736	922 aa		5.19	□□□□□ -1.58
TRS33	YOR115C	TDA3	P38758	523 aa		5.19	□□□□□ -1.58
TRS33	YOR115C	QNS1	P38795	714 aa	Known RBP	5.19	□□□□□ -1.58
TRS33	YOR115C	ACA1	P39970	489 aa		5.19	□□□□□ -1.58
TRS33	YOR115C	YNL320W	P42840	284 aa		5.19	□□□□□ -1.58
TRS33	YOR115C	SOL4	P53315	255 aa		5.19	□□□□□ -1.58
TRS33	YOR115C	NCE103	P53615	221 aa		5.19	□□□□□ -1.58
TRS33	YOR115C	ECI1	Q05871	280 aa		5.19	□□□□□ -1.58
TRS33	YOR115C	RSA3	Q05942	220 aa	Known RBP	5.19	□□□□□ -1.58
TRS33	YOR115C	CSR1	Q06705	408 aa	Known RBP	5.19	□□□□□ -1.58
TRS33	YOR115C	SDH5	Q08230	162 aa		5.19	□□□□□ -1.58
TRS33	YOR115C	TY4A-H	Q6Q5P6	413 aa		5.19	□□□□□ -1.58
TRS33	YOR115C	YOL087C	Q99247	1116 aa		5.19	□□□□□ -1.58
TRS33	YOR115C	RAD18	P10862	487 aa		5.18	□□□□□ -1.58
TRS33	YOR115C	PCK1	P10963	549 aa		5.18	□□□□□ -1.58
TRS33	YOR115C	MSD1	P15179	658 aa	Known RBP	5.18	□□□□□ -1.58
TRS33	YOR115C	DBP2	P24783	546 aa	Known RBP	5.18	□□□□□ -1.58
TRS33	YOR115C	CDC12	P32468	407 aa	Known RBP	5.18	□□□□□ -1.58
TRS33	YOR115C	ECM1	P39715	212 aa		5.18	□□□□□ -1.58
TRS33	YOR115C	GEM1	P39722	662 aa		5.18	□□□□□ -1.58
TRS33	YOR115C	SDS3	P40505	327 aa		5.18	□□□□□ -1.58
TRS33	YOR115C	FIS1	P40515	155 aa		5.18	□□□□□ -1.58
TRS33	YOR115C	TED1	P40533	473 aa		5.18	□□□□□ -1.58
TRS33	YOR115C	BRO1	P48582	844 aa		5.18	□□□□□ -1.58
TRS33	YOR115C	LIF1	P53150	421 aa		5.18	□□□□□ -1.58
TRS33	YOR115C	YGR021W	P53212	290 aa		5.18	□□□□□ -1.58
TRS33	YOR115C	NCS2	P53923	493 aa	Predicted RBP	5.18	□□□□□ -1.58
TRS33	YOR115C	TIM8	P57744	87 aa		5.18	□□□□□ -1.58
TRS33	YOR115C	RNT1	Q02555	471 aa		5.18	□□□□□ -1.58
TRS33	YOR115C	YML037C	Q03703	340 aa		5.18	□□□□□ -1.58
TRS33	YOR115C	STE23	Q06010	1027 aa		5.18	□□□□□ -1.58
TRS33	YOR115C	APL5	Q08951	932 aa	Known RBP	5.18	□□□□□ -1.58
TRS33	YOR115C	SLX4	Q12098	748 aa		5.18	□□□□□ -1.58
TRS33	YOR115C	ZRT2	Q12436	422 aa		5.18	□□□□□ -1.58
TRS33	YOR115C	SWI6	P09959	803 aa		5.17	□□□□□ -1.58
TRS33	YOR115C	RPL11A	P0C0W9	174 aa	Known RBP	5.17	□□□□□ -1.58
TRS33	YOR115C	PYC1	P11154	1178 aa	Known RBP	5.17	□□□□□ -1.58
TRS33	YOR115C	ERS1	P17261	260 aa		5.17	□□□□□ -1.58
TRS33	YOR115C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	5.17	□□□□□ -1.58	not detected
TRS33	YOR115C	TGL1	P34163	548 aa		5.17	□□□□□ -1.58
TRS33	YOR115C	YKL151C	P36059	337 aa		5.17	□□□□□ -1.58
TRS33	YOR115C	TRZ1	P36159	838 aa	Predicted RBP	5.17	□□□□□ -1.58
TRS33	YOR115C	MED8	P38304	223 aa		5.17	□□□□□ -1.58
TRS33	YOR115C	KAP123	P40069	1113 aa	Known RBP	5.17	□□□□□ -1.58
TRS33	YOR115C	MGS1	P40151	587 aa		5.17	□□□□□ -1.58
TRS33	YOR115C	NIT1	P40447	199 aa		5.17	□□□□□ -1.58
TRS33	YOR115C	SEC26	P41810	973 aa	Known RBP	5.17	□□□□□ -1.58
TRS33	YOR115C	VID30	P53076	958 aa		5.17	□□□□□ -1.58
TRS33	YOR115C	GPG1	P53130	126 aa		5.17	□□□□□ -1.58
TRS33	YOR115C	YNR063W	P53749	607 aa		5.17	□□□□□ -1.58
TRS33	YOR115C	CNM67	P53865	581 aa	Known RBP	5.17	□□□□□ -1.58
TRS33	YOR115C	TSR1	Q07381	788 aa	Known RBP	5.17	□□□□□ -1.58
TRS33	YOR115C	YPL225W	Q08971	146 aa	Known RBP	5.17	□□□□□ -1.58
TRS33	YOR115C	TY1A-NL1	Q12391	440 aa	Known RBP	5.17	□□□□□ -1.58
TRS33	YOR115C	SPO21	Q12411	609 aa		5.17	□□□□□ -1.58
TRS33	YOR115C	RPL11B	Q3E757	174 aa	Predicted RBP	5.17	□□□□□ -1.58
TRS33	YOR115C	FKS1	P38631	1876 aa	Known RBP	5.17	□□□□□ -1.58
TRS33	YOR115C	PGK1	P00560	416 aa	Known RBP	5.16	□□□□□ -1.58
TRS33	YOR115C	FBP1	P09201	348 aa		5.16	□□□□□ -1.58
TRS33	YOR115C	CDC48	P25694	835 aa	Known RBP	5.16	□□□□□ -1.58
TRS33	YOR115C	KIP1	P28742	1111 aa		5.16	□□□□□ -1.58
TRS33	YOR115C	GPI10	P30777	616 aa		5.16	□□□□□ -1.58
TRS33	YOR115C	SFP1	P32432	683 aa		5.16	□□□□□ -1.58
TRS33	YOR115C	YSC83	P32792	385 aa		5.16	□□□□□ -1.58
TRS33	YOR115C	DOM34	P33309	386 aa		5.16	□□□□□ -1.58
TRS33	YOR115C	SLA2	P33338	968 aa		5.16	□□□□□ -1.58
TRS33	YOR115C	SHP1	P34223	423 aa		5.16	□□□□□ -1.58
TRS33	YOR115C	BLI1	P35727	113 aa		5.16	□□□□□ -1.58
TRS33	YOR115C	YBR284W	P38150	797 aa		5.16	□□□□□ -1.58
TRS33	YOR115C	UBP13	P38187	747 aa		5.16	□□□□□ -1.58
TRS33	YOR115C	OLA1	P38219	394 aa	Known RBP	5.16	□□□□□ -1.58
TRS33	YOR115C	ATG14	P38270	344 aa		5.16	□□□□□ -1.58
TRS33	YOR115C	SPP381	P38282	291 aa	Predicted RBP	5.16	□□□□□ -1.58
TRS33	YOR115C	RCK2	P38623	610 aa		5.16	□□□□□ -1.58
TRS33	YOR115C	HSE1	P38753	452 aa		5.16	□□□□□ -1.58
TRS33	YOR115C	CCT2	P39076	527 aa	Known RBP	5.16	□□□□□ -1.58
TRS33	YOR115C	RPC17	P47076	161 aa		5.16	□□□□□ -1.58
TRS33	YOR115C	SGM1	P47166	707 aa		5.16	□□□□□ -1.58
TRS33	YOR115C	PMT3	P47190	753 aa		5.16	□□□□□ -1.58
TRS33	YOR115C	RIM8	P53179	542 aa		5.16	□□□□□ -1.58
TRS33	YOR115C	YGR117C	P53270	476 aa		5.16	□□□□□ -1.58
TRS33	YOR115C	TPO2	P53283	614 aa		5.16	□□□□□ -1.58
TRS33	YOR115C	JJJ1	P53863	590 aa		5.16	□□□□□ -1.58
TRS33	YOR115C	SQS1	P53866	767 aa	Known RBP	5.16	□□□□□ -1.58
TRS33	YOR115C	TDA9	Q04545	1251 aa		5.16	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms