RNA–Protein interactions for RNA: YOL022C

TSR4, Cytoplasmic protein required for correct processing of 20S pre-rRNA, yeast

Gene TSR4, Length 1,227 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TSR4	YOL022C	NIC96	P34077	839 aa		3.93	□□□□□ -1.78
TSR4	YOL022C	MRPL7	P36519	292 aa		3.93	□□□□□ -1.78
TSR4	YOL022C	PIP2	P52960	996 aa		3.93	□□□□□ -1.78
TSR4	YOL022C	YGL117W	P53133	265 aa		3.93	□□□□□ -1.78
TSR4	YOL022C	SLD3	P53135	668 aa		3.93	□□□□□ -1.78
TSR4	YOL022C	YGR054W	P53235	642 aa	Known RBP	3.93	□□□□□ -1.78
TSR4	YOL022C	PTA1	Q01329	785 aa	Predicted RBP	3.93	□□□□□ -1.78
TSR4	YOL022C	NGL2	Q03264	515 aa	Known RBP	3.93	□□□□□ -1.78
TSR4	YOL022C	ARG7	Q04728	441 aa		3.93	□□□□□ -1.78
TSR4	YOL022C	ULA1	Q12059	462 aa		3.93	□□□□□ -1.78
TSR4	YOL022C	YPR027C	Q12079	277 aa		3.93	□□□□□ -1.78
TSR4	YOL022C	MDM20	Q12387	796 aa	Known RBP	3.93	□□□□□ -1.78
TSR4	YOL022C	ORC2	P32833	620 aa		3.92	□□□□□ -1.78
TSR4	YOL022C	FUI1	P38196	639 aa		3.92	□□□□□ -1.78
TSR4	YOL022C	EMP65	P40085	556 aa		3.92	□□□□□ -1.78
TSR4	YOL022C	YDL183C	P48569	320 aa		3.92	□□□□□ -1.78
TSR4	YOL022C	CPR8	P53728	308 aa		3.92	□□□□□ -1.78
TSR4	YOL022C	ADE5,7	P07244	802 aa	Known RBP	3.91	□□□□□ -1.78
TSR4	YOL022C	ATP12	P22135	325 aa		3.91	□□□□□ -1.78
TSR4	YOL022C	RPA135	P22138	1203 aa	Known RBP	3.91	□□□□□ -1.78
TSR4	YOL022C	PTP2	P29461	750 aa		3.91	□□□□□ -1.78
TSR4	YOL022C	RRP8	P38961	392 aa	Known RBP	3.91	□□□□□ -1.78
TSR4	YOL022C	IES5	P40060	125 aa		3.91	□□□□□ -1.78
TSR4	YOL022C	UBX4	P54730	416 aa		3.91	□□□□□ -1.78
TSR4	YOL022C	DAK1	P54838	584 aa	Known RBP	3.91	□□□□□ -1.78
TSR4	YOL022C	FMP30	Q02883	468 aa		3.91	□□□□□ -1.78
TSR4	YOL022C	EFR3	Q03653	782 aa	Known RBP	3.91	□□□□□ -1.78
TSR4	YOL022C	TRS23	Q03784	219 aa		3.91	□□□□□ -1.78
TSR4	YOL022C	RIM13	Q03792	727 aa		3.91	□□□□□ -1.78
TSR4	YOL022C	HOF1	Q05080	669 aa		3.91	□□□□□ -1.78
TSR4	YOL022C	ECM38	Q05902	660 aa	Predicted RBP	3.91	□□□□□ -1.78
TSR4	YOL022C	PEX15	Q08215	383 aa		3.91	□□□□□ -1.78
TSR4	YOL022C	PGI1	P12709	554 aa	Known RBP	3.9	□□□□□ -1.79
TSR4	YOL022C	MBR1	P23493	339 aa		3.9	□□□□□ -1.79
TSR4	YOL022C	PPE1	P38796	400 aa		3.9	□□□□□ -1.79
TSR4	YOL022C	RNR4	P49723	345 aa	Known RBP	3.9	□□□□□ -1.79
TSR4	YOL022C	YIP4	P53093	235 aa		3.9	□□□□□ -1.79
TSR4	YOL022C	SUB1	P54000	292 aa	Known RBP	3.9	□□□□□ -1.79
TSR4	YOL022C	RPS15	Q01855	142 aa	Known RBP	3.9	□□□□□ -1.79
TSR4	YOL022C	ATG16	Q03818	150 aa		3.9	□□□□□ -1.79
TSR4	YOL022C	VMS1	Q04311	632 aa	Known RBP	3.9	□□□□□ -1.79
TSR4	YOL022C	MLC2	Q06580	163 aa		3.9	□□□□□ -1.79
TSR4	YOL022C	BUD21	Q08492	214 aa	Predicted RBP	3.9	□□□□□ -1.79
TSR4	YOL022C	SLK19	Q08581	821 aa	Known RBP	3.9	□□□□□ -1.79
TSR4	YOL022C	RRP6	Q12149	733 aa	Known RBP	3.9	□□□□□ -1.79
TSR4	YOL022C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	3.9	□□□□□ -1.79	not detected
TSR4	YOL022C	HMG2	P12684	1045 aa		3.89	□□□□□ -1.79
TSR4	YOL022C	TRX2	P22803	104 aa	Known RBP	3.89	□□□□□ -1.79
TSR4	YOL022C	CNE1	P27825	502 aa		3.89	□□□□□ -1.79
TSR4	YOL022C	HXT4	P32467	576 aa		3.89	□□□□□ -1.79
TSR4	YOL022C	YKL133C	P36066	463 aa		3.89	□□□□□ -1.79
TSR4	YOL022C	EHT1	P38295	451 aa		3.89	□□□□□ -1.79
TSR4	YOL022C	THI6	P41835	540 aa		3.89	□□□□□ -1.79
TSR4	YOL022C	ENP2	P48234	707 aa	Known RBP	3.89	□□□□□ -1.79
TSR4	YOL022C	YGR021W	P53212	290 aa		3.89	□□□□□ -1.79
TSR4	YOL022C	CEF1	Q03654	590 aa	Predicted RBP	3.89	□□□□□ -1.79
TSR4	YOL022C	ARR3	Q06598	404 aa		3.89	□□□□□ -1.79
TSR4	YOL022C	YCG1	Q06680	1035 aa		3.89	□□□□□ -1.79
TSR4	YOL022C	PMA2	P19657	947 aa		3.88	□□□□□ -1.79
TSR4	YOL022C	HOP1	P20050	605 aa		3.88	□□□□□ -1.79
TSR4	YOL022C	YHR033W	P38690	423 aa		3.88	□□□□□ -1.79
TSR4	YOL022C	LRO1	P40345	661 aa		3.88	□□□□□ -1.79
TSR4	YOL022C	TAX4	P47030	604 aa		3.88	□□□□□ -1.79
TSR4	YOL022C	ECM16	Q04217	1267 aa	Known RBP	3.88	□□□□□ -1.79
TSR4	YOL022C	SEG1	Q04279	960 aa		3.88	□□□□□ -1.79
TSR4	YOL022C	PGK1	P00560	416 aa	Known RBP	3.87	□□□□□ -1.79
TSR4	YOL022C	ERG11	P10614	530 aa		3.87	□□□□□ -1.79
TSR4	YOL022C	AAD3	P25612	363 aa		3.87	□□□□□ -1.79
TSR4	YOL022C	YHL041W	P38730	149 aa		3.87	□□□□□ -1.79
TSR4	YOL022C	RIM4	P38741	713 aa		3.87	□□□□□ -1.79
TSR4	YOL022C	HIS6	P40545	261 aa		3.87	□□□□□ -1.79
TSR4	YOL022C	SNM1	P40993	198 aa		3.87	□□□□□ -1.79
TSR4	YOL022C	CNM67	P53865	581 aa	Known RBP	3.87	□□□□□ -1.79
TSR4	YOL022C	MFM1	Q02783	413 aa		3.87	□□□□□ -1.79
TSR4	YOL022C	AIM41	Q12032	185 aa		3.87	□□□□□ -1.79
TSR4	YOL022C	ZPS1	Q12512	249 aa		3.87	□□□□□ -1.79
TSR4	YOL022C	CPA2	P03965	1118 aa	Known RBP	3.86	□□□□□ -1.79
TSR4	YOL022C	RPL7A	P05737	244 aa	Known RBP	3.86	□□□□□ -1.79
TSR4	YOL022C	MSS18	P08593	268 aa		3.86	□□□□□ -1.79
TSR4	YOL022C	APA1	P16550	321 aa	Known RBP	3.86	□□□□□ -1.79
TSR4	YOL022C	DGR2	P32330	852 aa		3.86	□□□□□ -1.79
TSR4	YOL022C	DHR2	P36009	735 aa	Predicted RBP	3.86	□□□□□ -1.79
TSR4	YOL022C	HOT13	P36078	116 aa		3.86	□□□□□ -1.79
TSR4	YOL022C	IRC5	P43610	853 aa		3.86	□□□□□ -1.79
TSR4	YOL022C	BNA3	P47039	444 aa	Known RBP	3.86	□□□□□ -1.79
TSR4	YOL022C	BUD17	P53727	317 aa		3.86	□□□□□ -1.79
TSR4	YOL022C	CEG1	Q01159	459 aa	Predicted RBP	3.86	□□□□□ -1.79
TSR4	YOL022C	NGL1	Q08213	363 aa	Known RBP	3.86	□□□□□ -1.79
TSR4	YOL022C	AFT2	Q08957	416 aa		3.86	□□□□□ -1.79
TSR4	YOL022C	RPL7B	Q12213	244 aa	Known RBP	3.86	□□□□□ -1.79
TSR4	YOL022C	RMA1	P36001	430 aa	Known RBP	3.85	□□□□□ -1.79
TSR4	YOL022C	PIH1	P38768	344 aa		3.85	□□□□□ -1.79
TSR4	YOL022C	YEL025C	P39991	1188 aa		3.85	□□□□□ -1.79
TSR4	YOL022C	EAF5	P39995	279 aa		3.85	□□□□□ -1.79
TSR4	YOL022C	LTP1	P40347	161 aa		3.85	□□□□□ -1.79
TSR4	YOL022C	QRI7	P43122	407 aa		3.85	□□□□□ -1.79
TSR4	YOL022C	TAN1	P53072	289 aa	Predicted RBP	3.85	□□□□□ -1.79
TSR4	YOL022C	COQ6	P53318	479 aa		3.85	□□□□□ -1.79
TSR4	YOL022C	HOL1	P53389	586 aa		3.85	□□□□□ -1.79
TSR4	YOL022C	USA1	Q03714	838 aa		3.85	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 37.6 ms