RNA–Protein interactions for RNA: YMR172C-A

YMR172C-A, Transcript of Dubious open reading frame, yeastyeast

Gene YMR172C-A, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YMR172C-AYMR172C-A CRG1P38892 291 aaRIP-Chip data2.11□□□□□ -2.07not detected
YMR172C-AYMR172C-A NUP82P40368 713 aa2.11□□□□□ -2.07
YMR172C-AYMR172C-A IRC7P43623 340 aa2.11□□□□□ -2.07
YMR172C-AYMR172C-A UGO1Q03327 502 aa2.11□□□□□ -2.07
YMR172C-AYMR172C-A PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.11□□□□□ -2.07not detected
YMR172C-AYMR172C-A IME1P21190 360 aa2.1□□□□□ -2.07
YMR172C-AYMR172C-A CAP1P28495 268 aaKnown RBP2.1□□□□□ -2.07
YMR172C-AYMR172C-A ATO2P32907 282 aa2.1□□□□□ -2.07
YMR172C-AYMR172C-A PBP2P38151 413 aaKnown RBP RIP-Chip data2.1□□□□□ -2.07not detected
YMR172C-AYMR172C-A FTR1P40088 404 aa2.1□□□□□ -2.07
YMR172C-AYMR172C-A NNF1P47149 201 aa2.1□□□□□ -2.07
YMR172C-AYMR172C-A TAF4P50105 388 aa2.1□□□□□ -2.07
YMR172C-AYMR172C-A COP1P53622 1201 aaKnown RBP2.1□□□□□ -2.07
YMR172C-AYMR172C-A SCW10Q04951 389 aa2.1□□□□□ -2.07
YMR172C-AYMR172C-A AIM41Q12032 185 aa2.1□□□□□ -2.07
YMR172C-AYMR172C-A AHA1Q12449 350 aaKnown RBP2.1□□□□□ -2.07
YMR172C-AYMR172C-A RPS17AP02407 136 aaKnown RBP2.09□□□□□ -2.07
YMR172C-AYMR172C-A RPS17BP14127 136 aaKnown RBP2.09□□□□□ -2.07
YMR172C-AYMR172C-A MSH2P25847 964 aa2.09□□□□□ -2.07
YMR172C-AYMR172C-A PRE4P30657 266 aa2.09□□□□□ -2.07
YMR172C-AYMR172C-A CCL1P37366 393 aa2.09□□□□□ -2.07
YMR172C-AYMR172C-A MTG2P38860 518 aa2.09□□□□□ -2.07
YMR172C-AYMR172C-A OAF1P39720 1047 aaPredicted RBP2.09□□□□□ -2.07
YMR172C-AYMR172C-A LYS20P48570 428 aaKnown RBP2.09□□□□□ -2.07
YMR172C-AYMR172C-A SAP4P53036 818 aa2.09□□□□□ -2.07
YMR172C-AYMR172C-A AAT1Q01802 451 aa2.09□□□□□ -2.07
YMR172C-AYMR172C-A SRL1Q08673 210 aa2.09□□□□□ -2.07
YMR172C-AYMR172C-A YOL098CQ12496 1037 aa2.09□□□□□ -2.07
YMR172C-AYMR172C-A HOP1P20050 605 aa2.08□□□□□ -2.08
YMR172C-AYMR172C-A COQ3P27680 312 aa2.08□□□□□ -2.08
YMR172C-AYMR172C-A RPT3P33298 428 aaKnown RBP2.08□□□□□ -2.08
YMR172C-AYMR172C-A YHR033WP38690 423 aa2.08□□□□□ -2.08
YMR172C-AYMR172C-A CFD1P40558 293 aa2.08□□□□□ -2.08
YMR172C-AYMR172C-A MDV1P47025 714 aa2.08□□□□□ -2.08
YMR172C-AYMR172C-A BOP3P53958 396 aa2.08□□□□□ -2.08
YMR172C-AYMR172C-A RPS15Q01855 142 aaKnown RBP2.08□□□□□ -2.08
YMR172C-AYMR172C-A RPN4Q03465 531 aa2.08□□□□□ -2.08
YMR172C-AYMR172C-A HLR1Q04429 423 aa2.08□□□□□ -2.08
YMR172C-AYMR172C-A SPN1Q06505 410 aaPredicted RBP2.08□□□□□ -2.08
YMR172C-AYMR172C-A GRS2Q06817 618 aa2.08□□□□□ -2.08
YMR172C-AYMR172C-A STP4Q07351 490 aa2.08□□□□□ -2.08
YMR172C-AYMR172C-A YEL076C-AP0CX16 216 aa2.07□□□□□ -2.08
YMR172C-AYMR172C-A YLR464WP0CX17 216 aa2.07□□□□□ -2.08
YMR172C-AYMR172C-A EHT1P38295 451 aa2.07□□□□□ -2.08
YMR172C-AYMR172C-A YEL076CP39971 216 aa2.07□□□□□ -2.08
YMR172C-AYMR172C-A TDA10P42938 290 aa2.07□□□□□ -2.08
YMR172C-AYMR172C-A SAE2P46946 345 aa2.07□□□□□ -2.08
YMR172C-AYMR172C-A YGL260WP53056 76 aa2.07□□□□□ -2.08
YMR172C-AYMR172C-A NOP15P53927 220 aaPredicted RBP2.07□□□□□ -2.08
YMR172C-AYMR172C-A ORC1P54784 914 aaPredicted RBP2.07□□□□□ -2.08
YMR172C-AYMR172C-A SNU56Q03782 492 aaKnown RBP2.07□□□□□ -2.08
YMR172C-AYMR172C-A YOR389WQ08912 624 aa2.07□□□□□ -2.08
YMR172C-AYMR172C-A YER190C-BP0CX94 160 aa2.06□□□□□ -2.08
YMR172C-AYMR172C-A YEL077W-AP0CX95 160 aa2.06□□□□□ -2.08
YMR172C-AYMR172C-A YGR296C-BP0CX96 160 aa2.06□□□□□ -2.08
YMR172C-AYMR172C-A YPL283W-BP0CX97 160 aa2.06□□□□□ -2.08
YMR172C-AYMR172C-A YPR204C-AP0CX98 160 aa2.06□□□□□ -2.08
YMR172C-AYMR172C-A YPK1P12688 680 aaKnown RBP2.06□□□□□ -2.08
YMR172C-AYMR172C-A MNN1P39106 762 aa2.06□□□□□ -2.08
YMR172C-AYMR172C-A RET2P43621 546 aa2.06□□□□□ -2.08
YMR172C-AYMR172C-A MET13P53128 600 aa2.06□□□□□ -2.08
YMR172C-AYMR172C-A NSE5Q03718 556 aa2.06□□□□□ -2.08
YMR172C-AYMR172C-A POB3Q04636 552 aaKnown RBP2.06□□□□□ -2.08
YMR172C-AYMR172C-A YCG1Q06680 1035 aa2.06□□□□□ -2.08
YMR172C-AYMR172C-A ILS1P09436 1072 aaKnown RBP2.05□□□□□ -2.08
YMR172C-AYMR172C-A BET2P20133 325 aa2.05□□□□□ -2.08
YMR172C-AYMR172C-A PRM2P40534 656 aa2.05□□□□□ -2.08
YMR172C-AYMR172C-A SAD1P43589 448 aa2.05□□□□□ -2.08
YMR172C-AYMR172C-A RPL15BP54780 204 aaPredicted RBP2.05□□□□□ -2.08
YMR172C-AYMR172C-A YTH1Q06102 208 aaPredicted RBP2.05□□□□□ -2.08
YMR172C-AYMR172C-A CYK3Q07533 885 aa2.05□□□□□ -2.08
YMR172C-AYMR172C-A NTG2Q08214 380 aa2.05□□□□□ -2.08
YMR172C-AYMR172C-A NRT1Q08485 598 aa2.05□□□□□ -2.08
YMR172C-AYMR172C-A DSE3Q08729 430 aa2.05□□□□□ -2.08
YMR172C-AYMR172C-A PCL8Q08966 492 aa2.05□□□□□ -2.08
YMR172C-AYMR172C-A PNO1Q99216 274 aaKnown RBP2.05□□□□□ -2.08
YMR172C-AYMR172C-A PHO2P07269 559 aa2.04□□□□□ -2.08
YMR172C-AYMR172C-A SWI6P09959 803 aa2.04□□□□□ -2.08
YMR172C-AYMR172C-A GLN4P13188 809 aaKnown RBP2.04□□□□□ -2.08
YMR172C-AYMR172C-A YCP4P25349 247 aaKnown RBP2.04□□□□□ -2.08
YMR172C-AYMR172C-A SEC65P29478 273 aa2.04□□□□□ -2.08
YMR172C-AYMR172C-A CDS1P38221 457 aa2.04□□□□□ -2.08
YMR172C-AYMR172C-A GND1P38720 489 aaKnown RBP2.04□□□□□ -2.08
YMR172C-AYMR172C-A YGR153WP48238 217 aa2.04□□□□□ -2.08
YMR172C-AYMR172C-A SDA1P53313 767 aaKnown RBP2.04□□□□□ -2.08
YMR172C-AYMR172C-A HRD3Q05787 833 aa2.04□□□□□ -2.08
YMR172C-AYMR172C-A UBX3Q12229 455 aa2.04□□□□□ -2.08
YMR172C-AYMR172C-A AAC1P04710 309 aa2.03□□□□□ -2.08
YMR172C-AYMR172C-A PCK1P10963 549 aa2.03□□□□□ -2.08
YMR172C-AYMR172C-A SEC12P11655 471 aa2.03□□□□□ -2.08
YMR172C-AYMR172C-A AIM17P23180 465 aaKnown RBP2.03□□□□□ -2.08
YMR172C-AYMR172C-A YPT10P38146 199 aa2.03□□□□□ -2.08
YMR172C-AYMR172C-A YJL193WP39542 402 aa2.03□□□□□ -2.08
YMR172C-AYMR172C-A SQS1P53866 767 aaKnown RBP2.03□□□□□ -2.08
YMR172C-AYMR172C-A YNL058CP53947 316 aa2.03□□□□□ -2.08
YMR172C-AYMR172C-A USA1Q03714 838 aa2.03□□□□□ -2.08
YMR172C-AYMR172C-A CRT10Q08226 957 aa2.03□□□□□ -2.08
YMR172C-AYMR172C-A YJU2P28320 278 aaPredicted RBP2.02□□□□□ -2.09
YMR172C-AYMR172C-A LRO1P40345 661 aa2.02□□□□□ -2.09
YMR172C-AYMR172C-A YIL169CP40442 995 aa2.02□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 43.8 ms