RNA–Protein interactions for RNA: YJR005C-A

LSO1, Transcript of Putative protein of unknown function, yeast

Gene LSO1, Length 282 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSO1	YJR005C-A	MLF3	P32047	452 aa		4.66	□□□□□ -1.66
LSO1	YJR005C-A	BUD2	P33314	1104 aa		4.66	□□□□□ -1.66
LSO1	YJR005C-A	DUR3	P33413	735 aa		4.66	□□□□□ -1.66
LSO1	YJR005C-A	DRE2	P36152	348 aa		4.66	□□□□□ -1.66
LSO1	YJR005C-A	NOP4	P37838	685 aa	Known RBP	4.66	□□□□□ -1.66
LSO1	YJR005C-A	PCM1	P38628	557 aa	Known RBP	4.66	□□□□□ -1.66
LSO1	YJR005C-A	QNS1	P38795	714 aa	Known RBP	4.66	□□□□□ -1.66
LSO1	YJR005C-A	TMN3	P40071	706 aa		4.66	□□□□□ -1.66
LSO1	YJR005C-A	YMR134W	P40207	237 aa		4.66	□□□□□ -1.66
LSO1	YJR005C-A	DSN1	P40568	576 aa		4.66	□□□□□ -1.66
LSO1	YJR005C-A	SAP185	P40856	1058 aa		4.66	□□□□□ -1.66
LSO1	YJR005C-A	NMD5	P46970	1048 aa		4.66	□□□□□ -1.66
LSO1	YJR005C-A	YJR079W	P47126	109 aa		4.66	□□□□□ -1.66
LSO1	YJR005C-A	YGL036W	P53185	909 aa	Predicted RBP	4.66	□□□□□ -1.66
LSO1	YJR005C-A	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.66	□□□□□ -1.66	not detected
LSO1	YJR005C-A	YNL134C	P53912	376 aa	Known RBP	4.66	□□□□□ -1.66
LSO1	YJR005C-A	MZM1	Q03429	123 aa	Predicted RBP	4.66	□□□□□ -1.66
LSO1	YJR005C-A	RKM2	Q03942	479 aa		4.66	□□□□□ -1.66
LSO1	YJR005C-A	DOT1	Q04089	582 aa	Known RBP	4.66	□□□□□ -1.66
LSO1	YJR005C-A	YDR278C	Q05612	105 aa		4.66	□□□□□ -1.66
LSO1	YJR005C-A	SFH1	Q06168	426 aa		4.66	□□□□□ -1.66
LSO1	YJR005C-A	ACM1	Q08981	209 aa		4.66	□□□□□ -1.66
LSO1	YJR005C-A	YOR223W	Q12015	292 aa		4.66	□□□□□ -1.66
LSO1	YJR005C-A	YPR027C	Q12079	277 aa		4.66	□□□□□ -1.66
LSO1	YJR005C-A	COX4	P04037	155 aa		4.65	□□□□□ -1.67
LSO1	YJR005C-A	RPB2	P08518	1224 aa	Known RBP	4.65	□□□□□ -1.67
LSO1	YJR005C-A	SAT4	P25333	603 aa	Known RBP	4.65	□□□□□ -1.67
LSO1	YJR005C-A	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.65	□□□□□ -1.67	not detected
LSO1	YJR005C-A	LRE1	P25579	583 aa	Known RBP	4.65	□□□□□ -1.67
LSO1	YJR005C-A	VBA3	P25594	458 aa		4.65	□□□□□ -1.67
LSO1	YJR005C-A	CAP1	P28495	268 aa	Known RBP	4.65	□□□□□ -1.67
LSO1	YJR005C-A	BCS1	P32839	456 aa		4.65	□□□□□ -1.67
LSO1	YJR005C-A	VBA5	P36172	582 aa		4.65	□□□□□ -1.67
LSO1	YJR005C-A	MMS21	P38632	267 aa		4.65	□□□□□ -1.67
LSO1	YJR005C-A	SAW1	P39735	261 aa		4.65	□□□□□ -1.67
LSO1	YJR005C-A	RAD26	P40352	1085 aa		4.65	□□□□□ -1.67
LSO1	YJR005C-A	ASG1	P40467	964 aa		4.65	□□□□□ -1.67
LSO1	YJR005C-A	INP51	P40559	946 aa	Known RBP	4.65	□□□□□ -1.67
LSO1	YJR005C-A	CTK3	P46963	296 aa	Predicted RBP	4.65	□□□□□ -1.67
LSO1	YJR005C-A	URB2	P47108	1174 aa		4.65	□□□□□ -1.67
LSO1	YJR005C-A	ZIP2	P53061	704 aa		4.65	□□□□□ -1.67
LSO1	YJR005C-A	MND1	P53102	219 aa		4.65	□□□□□ -1.67
LSO1	YJR005C-A	YNL247W	P53852	767 aa	Known RBP	4.65	□□□□□ -1.67
LSO1	YJR005C-A	RPL22B	P56628	122 aa	Known RBP	4.65	□□□□□ -1.67
LSO1	YJR005C-A	SXM1	Q04175	944 aa	Known RBP	4.65	□□□□□ -1.67
LSO1	YJR005C-A	MDM38	Q08179	573 aa		4.65	□□□□□ -1.67
LSO1	YJR005C-A	AIM39	Q08223	395 aa		4.65	□□□□□ -1.67
LSO1	YJR005C-A	DNL4	Q08387	944 aa	Predicted RBP	4.65	□□□□□ -1.67
LSO1	YJR005C-A	FAP7	Q12055	197 aa	Predicted RBP	4.65	□□□□□ -1.67
LSO1	YJR005C-A	EMP46	Q12396	444 aa		4.65	□□□□□ -1.67
LSO1	YJR005C-A	BI2	P03873	423 aa		4.64	□□□□□ -1.67
LSO1	YJR005C-A	BI4	P03879	638 aa		4.64	□□□□□ -1.67
LSO1	YJR005C-A	ADE3	P07245	946 aa	Known RBP	4.64	□□□□□ -1.67
LSO1	YJR005C-A	TUB3	P09734	445 aa	Known RBP	4.64	□□□□□ -1.67
LSO1	YJR005C-A	SLY1	P22213	666 aa		4.64	□□□□□ -1.67
LSO1	YJR005C-A	VPS3	P23643	1011 aa		4.64	□□□□□ -1.67
LSO1	YJR005C-A	ILV6	P25605	309 aa	Known RBP	4.64	□□□□□ -1.67
LSO1	YJR005C-A	MSH1	P25846	959 aa		4.64	□□□□□ -1.67
LSO1	YJR005C-A	MGT1	P26188	188 aa		4.64	□□□□□ -1.67
LSO1	YJR005C-A	YME1	P32795	747 aa		4.64	□□□□□ -1.67
LSO1	YJR005C-A	RPT1	P33299	467 aa	Known RBP	4.64	□□□□□ -1.67
LSO1	YJR005C-A	SRB2	P34162	210 aa		4.64	□□□□□ -1.67
LSO1	YJR005C-A	HEL1	P36113	551 aa		4.64	□□□□□ -1.67
LSO1	YJR005C-A	SHE3	P38272	425 aa	Known RBP	4.64	□□□□□ -1.67
LSO1	YJR005C-A	YER186C	P40101	306 aa		4.64	□□□□□ -1.67
LSO1	YJR005C-A	PXA1	P41909	870 aa		4.64	□□□□□ -1.67
LSO1	YJR005C-A	SNZ3	P43545	298 aa		4.64	□□□□□ -1.67
LSO1	YJR005C-A	TRS85	P46944	698 aa		4.64	□□□□□ -1.67
LSO1	YJR005C-A	HLJ1	P48353	224 aa		4.64	□□□□□ -1.67
LSO1	YJR005C-A	GCV2	P49095	1034 aa		4.64	□□□□□ -1.67
LSO1	YJR005C-A	DUS1	P53759	423 aa	Known RBP	4.64	□□□□□ -1.67
LSO1	YJR005C-A	SNZ2	P53824	298 aa		4.64	□□□□□ -1.67
LSO1	YJR005C-A	COG6	P53959	839 aa		4.64	□□□□□ -1.67
LSO1	YJR005C-A	YNL040W	P53960	456 aa	Predicted RBP	4.64	□□□□□ -1.67
LSO1	YJR005C-A	KTR5	P53966	522 aa	Predicted RBP	4.64	□□□□□ -1.67
LSO1	YJR005C-A	SHR3	Q02774	210 aa		4.64	□□□□□ -1.67
LSO1	YJR005C-A	MUB1	Q03162	620 aa		4.64	□□□□□ -1.67
LSO1	YJR005C-A	SNU56	Q03782	492 aa	Known RBP	4.64	□□□□□ -1.67
LSO1	YJR005C-A	PRM6	Q04705	352 aa		4.64	□□□□□ -1.67
LSO1	YJR005C-A	SUT2	Q12286	268 aa		4.64	□□□□□ -1.67
LSO1	YJR005C-A	PCD1	Q12524	340 aa		4.64	□□□□□ -1.67
LSO1	YJR005C-A	BI3	Q9ZZW7	517 aa		4.64	□□□□□ -1.67
LSO1	YJR005C-A	CMD1	P06787	147 aa	Known RBP	4.63	□□□□□ -1.67
LSO1	YJR005C-A	GCR1	P07261	785 aa		4.63	□□□□□ -1.67
LSO1	YJR005C-A	PUT4	P15380	627 aa		4.63	□□□□□ -1.67
LSO1	YJR005C-A	AEP2	P22136	580 aa		4.63	□□□□□ -1.67
LSO1	YJR005C-A	TRX1	P22217	103 aa	Known RBP	4.63	□□□□□ -1.67
LSO1	YJR005C-A	KAR4	P25583	335 aa		4.63	□□□□□ -1.67
LSO1	YJR005C-A	PAH1	P32567	862 aa		4.63	□□□□□ -1.67
LSO1	YJR005C-A	CSE2	P33308	149 aa		4.63	□□□□□ -1.67
LSO1	YJR005C-A	OAF3	P36023	863 aa		4.63	□□□□□ -1.67
LSO1	YJR005C-A	YMC2	P38087	329 aa		4.63	□□□□□ -1.67
LSO1	YJR005C-A	AGP2	P38090	596 aa		4.63	□□□□□ -1.67
LSO1	YJR005C-A	SWC5	P38326	303 aa		4.63	□□□□□ -1.67
LSO1	YJR005C-A	ALD5	P40047	520 aa	Known RBP	4.63	□□□□□ -1.67
LSO1	YJR005C-A	SIP5	P40210	489 aa	Known RBP	4.63	□□□□□ -1.67
LSO1	YJR005C-A	YIL054W	P40524	105 aa		4.63	□□□□□ -1.67
LSO1	YJR005C-A	MKT1	P40850	830 aa	Known RBP	4.63	□□□□□ -1.67
LSO1	YJR005C-A	ZAP1	P47043	880 aa		4.63	□□□□□ -1.67
LSO1	YJR005C-A	AZR1	P50080	613 aa		4.63	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms