RNA–Protein interactions for RNA: YGR074W

SMD1, Transcript of Core Sm protein Sm D1, yeastyeast

Gene SMD1, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD1YGR074W FDC1Q03034 503 aa2.52□□□□□ -2.01
SMD1YGR074W HLR1Q04429 423 aa2.52□□□□□ -2.01
SMD1YGR074W THI22Q06490 572 aa2.52□□□□□ -2.01
SMD1YGR074W YDL121CQ07541 149 aa2.52□□□□□ -2.01
SMD1YGR074W MSL5Q12186 476 aaKnown RBP RIP-Chip data2.52□□□□□ -2.01not detected
SMD1YGR074W ICT1Q12385 394 aa2.52□□□□□ -2.01
SMD1YGR074W DBP10Q12389 995 aaKnown RBP2.52□□□□□ -2.01
SMD1YGR074W YNL162W-AQ3E7A8 72 aa2.52□□□□□ -2.01
SMD1YGR074W NUC1P08466 329 aa2.51□□□□□ -2.01
SMD1YGR074W TUB1P09733 447 aaKnown RBP2.51□□□□□ -2.01
SMD1YGR074W ADH4P10127 382 aa2.51□□□□□ -2.01
SMD1YGR074W POL3P15436 1097 aa2.51□□□□□ -2.01
SMD1YGR074W PFK2P16862 959 aaKnown RBP RIP-Chip data2.51□□□□□ -2.01not detected
SMD1YGR074W DHR2P36009 735 aaPredicted RBP2.51□□□□□ -2.01
SMD1YGR074W PPS1P38148 807 aa2.51□□□□□ -2.01
SMD1YGR074W YBR053CP38235 358 aa2.51□□□□□ -2.01
SMD1YGR074W BCD1P38772 366 aa2.51□□□□□ -2.01
SMD1YGR074W LYS9P38999 446 aa2.51□□□□□ -2.01
SMD1YGR074W UME6P39001 836 aa2.51□□□□□ -2.01
SMD1YGR074W FMP52P40008 231 aa2.51□□□□□ -2.01
SMD1YGR074W IES5P40060 125 aa2.51□□□□□ -2.01
SMD1YGR074W VFA1P40080 203 aa2.51□□□□□ -2.01
SMD1YGR074W RAD26P40352 1085 aa2.51□□□□□ -2.01
SMD1YGR074W PSF2P40359 213 aa2.51□□□□□ -2.01
SMD1YGR074W HOS4P40480 1083 aa2.51□□□□□ -2.01
SMD1YGR074W SMK1P41808 388 aa2.51□□□□□ -2.01
SMD1YGR074W THI6P41835 540 aa2.51□□□□□ -2.01
SMD1YGR074W YJL163CP46996 555 aa2.51□□□□□ -2.01
SMD1YGR074W MAD3P47074 515 aa2.51□□□□□ -2.01
SMD1YGR074W UBC11P52492 156 aa2.51□□□□□ -2.01
SMD1YGR074W PAN2P53010 1115 aaPredicted RBP2.51□□□□□ -2.01
SMD1YGR074W IMO32P53219 342 aa2.51□□□□□ -2.01
SMD1YGR074W YNR071CP53757 342 aa2.51□□□□□ -2.01
SMD1YGR074W RIA1P53893 1110 aa2.51□□□□□ -2.01
SMD1YGR074W ERG5P54781 538 aa2.51□□□□□ -2.01
SMD1YGR074W SSL2Q00578 843 aa2.51□□□□□ -2.01
SMD1YGR074W CEG1Q01159 459 aaPredicted RBP2.51□□□□□ -2.01
SMD1YGR074W MRPL13Q02204 264 aa2.51□□□□□ -2.01
SMD1YGR074W ATG21Q02887 496 aa2.51□□□□□ -2.01
SMD1YGR074W ADY4Q05955 493 aa2.51□□□□□ -2.01
SMD1YGR074W YFT2Q06676 274 aa2.51□□□□□ -2.01
SMD1YGR074W CRD1Q07560 283 aa2.51□□□□□ -2.01
SMD1YGR074W IRC13Q08630 104 aa2.51□□□□□ -2.01
SMD1YGR074W CHS5Q12114 671 aaKnown RBP2.51□□□□□ -2.01
SMD1YGR074W NKP1Q12493 238 aa2.51□□□□□ -2.01
SMD1YGR074W APA1P16550 321 aaKnown RBP2.5□□□□□ -2.01
SMD1YGR074W MDM10P18409 493 aa2.5□□□□□ -2.01
SMD1YGR074W CLB4P24871 460 aa2.5□□□□□ -2.01
SMD1YGR074W FUB1P25659 250 aa2.5□□□□□ -2.01
SMD1YGR074W RAD16P31244 790 aa2.5□□□□□ -2.01
SMD1YGR074W YPT7P32939 208 aa2.5□□□□□ -2.01
SMD1YGR074W SWE1P32944 819 aa2.5□□□□□ -2.01
SMD1YGR074W RPT3P33298 428 aaKnown RBP2.5□□□□□ -2.01
SMD1YGR074W XRS2P33301 854 aa2.5□□□□□ -2.01
SMD1YGR074W PHO11P35842 467 aa2.5□□□□□ -2.01
SMD1YGR074W RMA1P36001 430 aaKnown RBP2.5□□□□□ -2.01
SMD1YGR074W APL3P38065 1025 aa2.5□□□□□ -2.01
SMD1YGR074W PSY4P38193 441 aa2.5□□□□□ -2.01
SMD1YGR074W TDP1P38319 544 aa2.5□□□□□ -2.01
SMD1YGR074W CBR1P38626 284 aaKnown RBP2.5□□□□□ -2.01
SMD1YGR074W PHO12P38693 467 aa2.5□□□□□ -2.01
SMD1YGR074W RIX1P38883 763 aaPredicted RBP2.5□□□□□ -2.01
SMD1YGR074W CRG1P38892 291 aaRIP-Chip data2.5□□□□□ -2.01not detected
SMD1YGR074W YJL193WP39542 402 aa2.5□□□□□ -2.01
SMD1YGR074W KAP123P40069 1113 aaKnown RBP2.5□□□□□ -2.01
SMD1YGR074W TMN3P40071 706 aa2.5□□□□□ -2.01
SMD1YGR074W FTR1P40088 404 aa2.5□□□□□ -2.01
SMD1YGR074W CAB2P40506 365 aa2.5□□□□□ -2.01
SMD1YGR074W MAD2P40958 196 aa2.5□□□□□ -2.01
SMD1YGR074W PUS4P48567 403 aaKnown RBP2.5□□□□□ -2.01
SMD1YGR074W RFX1P48743 811 aa2.5□□□□□ -2.01
SMD1YGR074W SEC5P89102 971 aa2.5□□□□□ -2.01
SMD1YGR074W VPS64Q03944 604 aa2.5□□□□□ -2.01
SMD1YGR074W TMA64Q04600 565 aaKnown RBP2.5□□□□□ -2.01
SMD1YGR074W YSH1Q06224 779 aaPredicted RBP2.5□□□□□ -2.01
SMD1YGR074W RTK1Q12100 620 aaPredicted RBP2.5□□□□□ -2.01
SMD1YGR074W TRM13Q12383 476 aa2.5□□□□□ -2.01
SMD1YGR074W URA3P03962 267 aa2.49□□□□□ -2.01
SMD1YGR074W TUP1P16649 713 aa2.49□□□□□ -2.01
SMD1YGR074W BET2P20133 325 aa2.49□□□□□ -2.01
SMD1YGR074W VPS33P20795 691 aa2.49□□□□□ -2.01
SMD1YGR074W ARG1P22768 420 aa2.49□□□□□ -2.01
SMD1YGR074W MCM3P24279 971 aaKnown RBP2.49□□□□□ -2.01
SMD1YGR074W GFD2P25370 566 aaKnown RBP2.49□□□□□ -2.01
SMD1YGR074W RER1P25560 188 aa2.49□□□□□ -2.01
SMD1YGR074W GCD7P32502 381 aaPredicted RBP2.49□□□□□ -2.01
SMD1YGR074W SLC1P33333 303 aa2.49□□□□□ -2.01
SMD1YGR074W NUP120P35729 1037 aa2.49□□□□□ -2.01
SMD1YGR074W EXO84P38261 753 aa2.49□□□□□ -2.01
SMD1YGR074W LNP1P38878 278 aa2.49□□□□□ -2.01
SMD1YGR074W STT3P39007 718 aaKnown RBP2.49□□□□□ -2.01
SMD1YGR074W VID27P40157 782 aa2.49□□□□□ -2.01
SMD1YGR074W SKP2P42843 763 aa2.49□□□□□ -2.01
SMD1YGR074W GSM1P42950 618 aa2.49□□□□□ -2.01
SMD1YGR074W IDS2P46958 469 aa2.49□□□□□ -2.01
SMD1YGR074W MPS3P47069 682 aa2.49□□□□□ -2.01
SMD1YGR074W SAP4P53036 818 aa2.49□□□□□ -2.01
SMD1YGR074W TEL2P53038 688 aa2.49□□□□□ -2.01
SMD1YGR074W CPR6P53691 371 aaKnown RBP2.49□□□□□ -2.01
SMD1YGR074W YPL108WQ02872 168 aaPredicted RBP2.49□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 36.7 ms