RNA–Protein interactions for RNA: YGL228W

SHE10, Transcript of Protein involved in outer spore wall assembly, yeast

Gene SHE10, Length 1,734 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE10	YGL228W	KGD2	P19262	463 aa	Predicted RBP	5.68	□□□□□ -1.5
SHE10	YGL228W	PEX1	P24004	1043 aa		5.68	□□□□□ -1.5
SHE10	YGL228W	MGT1	P26188	188 aa		5.68	□□□□□ -1.5
SHE10	YGL228W	RAD27	P26793	382 aa		5.68	□□□□□ -1.5
SHE10	YGL228W	TPS2	P31688	896 aa	Known RBP	5.68	□□□□□ -1.5
SHE10	YGL228W	NFU1	P32860	256 aa		5.68	□□□□□ -1.5
SHE10	YGL228W	RGD2	P43556	714 aa		5.68	□□□□□ -1.5
SHE10	YGL228W	CEG1	Q01159	459 aa	Predicted RBP	5.68	□□□□□ -1.5
SHE10	YGL228W	MTD1	Q02046	320 aa	Known RBP	5.68	□□□□□ -1.5
SHE10	YGL228W	GCN5	Q03330	439 aa		5.68	□□□□□ -1.5
SHE10	YGL228W	CIR2	Q08822	631 aa		5.68	□□□□□ -1.5
SHE10	YGL228W	AHC1	Q12433	566 aa		5.68	□□□□□ -1.5
SHE10	YGL228W	PYC1	P11154	1178 aa	Known RBP	5.67	□□□□□ -1.5
SHE10	YGL228W	PEP5	P12868	1029 aa		5.67	□□□□□ -1.5
SHE10	YGL228W	SPO16	P17122	198 aa		5.67	□□□□□ -1.5
SHE10	YGL228W	MET16	P18408	261 aa	Predicted RBP	5.67	□□□□□ -1.5
SHE10	YGL228W	RGR1	P19263	1082 aa		5.67	□□□□□ -1.5
SHE10	YGL228W	PDE1	P22434	369 aa		5.67	□□□□□ -1.5
SHE10	YGL228W	DAL1	P32375	460 aa		5.67	□□□□□ -1.5
SHE10	YGL228W	HSP78	P33416	811 aa		5.67	□□□□□ -1.5
SHE10	YGL228W	MUD2	P36084	527 aa	Known RBP	5.67	□□□□□ -1.5
SHE10	YGL228W	YKR051W	P36142	418 aa		5.67	□□□□□ -1.5
SHE10	YGL228W	POP4	P38336	279 aa		5.67	□□□□□ -1.5
SHE10	YGL228W	MSC7	P38694	644 aa		5.67	□□□□□ -1.5
SHE10	YGL228W	INA22	P40576	216 aa		5.67	□□□□□ -1.5
SHE10	YGL228W	MCM6	P53091	1017 aa	Known RBP	5.67	□□□□□ -1.5
SHE10	YGL228W	RPL22B	P56628	122 aa	Known RBP	5.67	□□□□□ -1.5
SHE10	YGL228W	ARA2	Q04212	335 aa		5.67	□□□□□ -1.5
SHE10	YGL228W	AIM32	Q04689	311 aa		5.67	□□□□□ -1.5
SHE10	YGL228W	AAD4	Q07747	329 aa		5.67	□□□□□ -1.5
SHE10	YGL228W	APC5	Q08683	685 aa		5.67	□□□□□ -1.5
SHE10	YGL228W	LCB4	Q12246	624 aa		5.67	□□□□□ -1.5
SHE10	YGL228W	ARP7	Q12406	477 aa		5.67	□□□□□ -1.5
SHE10	YGL228W	CCP1	P00431	361 aa		5.66	□□□□□ -1.5
SHE10	YGL228W	CMD1	P06787	147 aa	Known RBP	5.66	□□□□□ -1.5
SHE10	YGL228W	RPB2	P08518	1224 aa	Known RBP	5.66	□□□□□ -1.5
SHE10	YGL228W	YIH1	P25637	258 aa		5.66	□□□□□ -1.5
SHE10	YGL228W	YBR225W	P38321	900 aa		5.66	□□□□□ -1.5
SHE10	YGL228W	CCT2	P39076	527 aa	Known RBP	5.66	□□□□□ -1.5
SHE10	YGL228W	VPS25	P47142	202 aa		5.66	□□□□□ -1.5
SHE10	YGL228W	PEX31	P53203	462 aa		5.66	□□□□□ -1.5
SHE10	YGL228W	YGR127W	P53275	312 aa		5.66	□□□□□ -1.5
SHE10	YGL228W	HEH2	Q03281	663 aa		5.66	□□□□□ -1.5
SHE10	YGL228W	SND1	Q04007	877 aa		5.66	□□□□□ -1.5
SHE10	YGL228W	MPC54	Q08550	464 aa		5.66	□□□□□ -1.5
SHE10	YGL228W	CCH1	P50077	2039 aa		5.66	□□□□□ -1.5
SHE10	YGL228W	SPE1	P08432	466 aa		5.65	□□□□□ -1.5
SHE10	YGL228W	HEM15	P16622	393 aa		5.65	□□□□□ -1.5
SHE10	YGL228W	YBP1	P38315	674 aa		5.65	□□□□□ -1.5
SHE10	YGL228W	RGD1	P38339	666 aa		5.65	□□□□□ -1.5
SHE10	YGL228W	STB5	P38699	743 aa		5.65	□□□□□ -1.5
SHE10	YGL228W	FSH1	P38777	243 aa	Known RBP	5.65	□□□□□ -1.5
SHE10	YGL228W	AIM18	P38884	321 aa		5.65	□□□□□ -1.5
SHE10	YGL228W	SMX2	P40204	77 aa	Known RBP	5.65	□□□□□ -1.5
SHE10	YGL228W	ATM1	P40416	690 aa		5.65	□□□□□ -1.5
SHE10	YGL228W	CNN1	P43618	361 aa		5.65	□□□□□ -1.5
SHE10	YGL228W	YJR039W	P47107	1121 aa		5.65	□□□□□ -1.5
SHE10	YGL228W	HLJ1	P48353	224 aa		5.65	□□□□□ -1.5
SHE10	YGL228W	RFX1	P48743	811 aa		5.65	□□□□□ -1.5
SHE10	YGL228W	YMR160W	Q03823	816 aa		5.65	□□□□□ -1.5
SHE10	YGL228W	YLR257W	Q06146	321 aa	Known RBP	5.65	□□□□□ -1.5
SHE10	YGL228W	CDC73	Q06697	393 aa		5.65	□□□□□ -1.5
SHE10	YGL228W	TPO1	Q07824	586 aa		5.65	□□□□□ -1.5
SHE10	YGL228W	YOR223W	Q12015	292 aa		5.65	□□□□□ -1.5
SHE10	YGL228W	YLL056C	Q12177	298 aa		5.65	□□□□□ -1.5
SHE10	YGL228W	AVL9	Q12500	764 aa		5.65	□□□□□ -1.5
SHE10	YGL228W	ADH4	P10127	382 aa		5.65	□□□□□ -1.51
SHE10	YGL228W	RAD16	P31244	790 aa		5.65	□□□□□ -1.51
SHE10	YGL228W	PTC3	P34221	468 aa	Known RBP	5.65	□□□□□ -1.51
SHE10	YGL228W	DIA4	P38705	446 aa	Predicted RBP	5.65	□□□□□ -1.51
SHE10	YGL228W	PPE1	P38796	400 aa		5.65	□□□□□ -1.51
SHE10	YGL228W	CKB2	P38930	258 aa		5.65	□□□□□ -1.51
SHE10	YGL228W	PRM9	P39551	298 aa		5.65	□□□□□ -1.51
SHE10	YGL228W	STL1	P39932	569 aa		5.65	□□□□□ -1.51
SHE10	YGL228W	CTK3	P46963	296 aa	Predicted RBP	5.65	□□□□□ -1.51
SHE10	YGL228W	URB2	P47108	1174 aa		5.65	□□□□□ -1.51
SHE10	YGL228W	CPR6	P53691	371 aa	Known RBP	5.65	□□□□□ -1.51
SHE10	YGL228W	YNL034W	P53963	612 aa		5.65	□□□□□ -1.51
SHE10	YGL228W	YNL018C	P53976	612 aa		5.65	□□□□□ -1.51
SHE10	YGL228W	PIR3	Q03180	325 aa		5.65	□□□□□ -1.51
SHE10	YGL228W	USA1	Q03714	838 aa		5.65	□□□□□ -1.51
SHE10	YGL228W	STE23	Q06010	1027 aa		5.65	□□□□□ -1.51
SHE10	YGL228W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	5.65	□□□□□ -1.51	not detected
SHE10	YGL228W	MNL2	Q12205	849 aa		5.65	□□□□□ -1.51
SHE10	YGL228W	NDJ1	Q12366	352 aa		5.65	□□□□□ -1.51
SHE10	YGL228W	POL3	P15436	1097 aa		5.64	□□□□□ -1.51
SHE10	YGL228W	CDC20	P26309	610 aa		5.64	□□□□□ -1.51
SHE10	YGL228W	UTR2	P32623	467 aa		5.64	□□□□□ -1.51
SHE10	YGL228W	TSA1	P34760	196 aa	Known RBP	5.64	□□□□□ -1.51
SHE10	YGL228W	BIT2	P38346	545 aa		5.64	□□□□□ -1.51
SHE10	YGL228W	URA8	P38627	578 aa	Predicted RBP	5.64	□□□□□ -1.51
SHE10	YGL228W	MSR1	P38714	643 aa		5.64	□□□□□ -1.51
SHE10	YGL228W	OTU2	P38747	307 aa	Known RBP	5.64	□□□□□ -1.51
SHE10	YGL228W	LAM1	P38851	1228 aa		5.64	□□□□□ -1.51
SHE10	YGL228W	CIN4	P39110	191 aa		5.64	□□□□□ -1.51
SHE10	YGL228W	EDC3	P39998	551 aa	Known RBP	5.64	□□□□□ -1.51
SHE10	YGL228W	MMF1	P40185	145 aa	Known RBP	5.64	□□□□□ -1.51
SHE10	YGL228W	ALA1	P40825	983 aa	Known RBP	5.64	□□□□□ -1.51
SHE10	YGL228W	SNG1	P46950	547 aa		5.64	□□□□□ -1.51
SHE10	YGL228W	TAH11	P47112	604 aa		5.64	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 65.1 ms