RNA–Protein interactions for RNA: YGL172W

NUP49, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP49, Length 1,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP49YGL172W LYS9P38999 446 aa7.05□□□□□ -1.28
NUP49YGL172W YJL045WP47052 634 aa7.05□□□□□ -1.28
NUP49YGL172W CWC22P53333 577 aaKnown RBP7.05□□□□□ -1.28
NUP49YGL172W RRP15Q06511 250 aaPredicted RBP7.05□□□□□ -1.28
NUP49YGL172W YPQ1Q12010 308 aa7.05□□□□□ -1.28
NUP49YGL172W SLY41P22215 453 aa7.04□□□□□ -1.28
NUP49YGL172W NUP60P39705 539 aa7.04□□□□□ -1.28
NUP49YGL172W PSP1P50896 841 aaKnown RBP7.04□□□□□ -1.28
NUP49YGL172W YNL144CP53907 740 aa7.04□□□□□ -1.28
NUP49YGL172W YNL040WP53960 456 aaPredicted RBP7.04□□□□□ -1.28
NUP49YGL172W CDC55Q00362 526 aa7.04□□□□□ -1.28
NUP49YGL172W BET4Q00618 327 aa7.04□□□□□ -1.28
NUP49YGL172W INA17Q02888 182 aa7.04□□□□□ -1.28
NUP49YGL172W THI21Q08975 551 aa7.04□□□□□ -1.28
NUP49YGL172W SPE3Q12074 293 aaKnown RBP7.04□□□□□ -1.28
NUP49YGL172W SPO21Q12411 609 aa7.04□□□□□ -1.28
NUP49YGL172W ZRT2Q12436 422 aa7.04□□□□□ -1.28
NUP49YGL172W YMR084WA2P2R3 262 aa7.03□□□□□ -1.28
NUP49YGL172W CCP1P00431 361 aa7.03□□□□□ -1.28
NUP49YGL172W RDH54P38086 958 aa7.03□□□□□ -1.28
NUP49YGL172W REI1P38344 393 aaPredicted RBP7.03□□□□□ -1.28
NUP49YGL172W SAP30P38429 201 aa7.03□□□□□ -1.28
NUP49YGL172W TMA108P40462 946 aa7.03□□□□□ -1.28
NUP49YGL172W KTR7P40504 517 aa7.03□□□□□ -1.28
NUP49YGL172W KTR6P54070 446 aa7.03□□□□□ -1.28
NUP49YGL172W DOS2P54858 310 aa7.03□□□□□ -1.28
NUP49YGL172W NSE5Q03718 556 aa7.03□□□□□ -1.28
NUP49YGL172W POB3Q04636 552 aaKnown RBP7.03□□□□□ -1.28
NUP49YGL172W BSP1Q06604 576 aa7.03□□□□□ -1.28
NUP49YGL172W PMT7Q06644 662 aa7.03□□□□□ -1.28
NUP49YGL172W SGO1Q08490 590 aa7.03□□□□□ -1.28
NUP49YGL172W CIR2Q08822 631 aa7.03□□□□□ -1.28
NUP49YGL172W RRD2Q12461 358 aa7.03□□□□□ -1.28
NUP49YGL172W PDR1P12383 1068 aa7.02□□□□□ -1.29
NUP49YGL172W YPK1P12688 680 aaKnown RBP7.02□□□□□ -1.29
NUP49YGL172W PMS1P14242 873 aa7.02□□□□□ -1.29
NUP49YGL172W MTF1P14908 341 aaKnown RBP7.02□□□□□ -1.29
NUP49YGL172W RDS2P19541 446 aaKnown RBP7.02□□□□□ -1.29
NUP49YGL172W YIH1P25637 258 aa7.02□□□□□ -1.29
NUP49YGL172W CAP1P28495 268 aaKnown RBP7.02□□□□□ -1.29
NUP49YGL172W MEI4P29467 408 aa7.02□□□□□ -1.29
NUP49YGL172W HSP78P33416 811 aa7.02□□□□□ -1.29
NUP49YGL172W DUG2P38149 878 aa7.02□□□□□ -1.29
NUP49YGL172W PCA1P38360 1216 aa7.02□□□□□ -1.29
NUP49YGL172W YHR219WP38900 624 aa7.02□□□□□ -1.29
NUP49YGL172W RPC17P47076 161 aa7.02□□□□□ -1.29
NUP49YGL172W NNF1P47149 201 aa7.02□□□□□ -1.29
NUP49YGL172W YNL247WP53852 767 aaKnown RBP7.02□□□□□ -1.29
NUP49YGL172W AAD4Q07747 329 aa7.02□□□□□ -1.29
NUP49YGL172W DAP1Q12091 152 aa7.02□□□□□ -1.29
NUP49YGL172W LPX1Q12405 387 aaKnown RBP7.02□□□□□ -1.29
NUP49YGL172W YEL077CQ3E7X8 1277 aa7.02□□□□□ -1.29
NUP49YGL172W END3P39013 349 aa7.01□□□□□ -1.29
NUP49YGL172W YML6P51998 286 aa7.01□□□□□ -1.29
NUP49YGL172W PEX31P53203 462 aa7.01□□□□□ -1.29
NUP49YGL172W LEE1Q02799 301 aaKnown RBP7.01□□□□□ -1.29
NUP49YGL172W SND1Q04007 877 aa7.01□□□□□ -1.29
NUP49YGL172W AIM32Q04689 311 aa7.01□□□□□ -1.29
NUP49YGL172W KAP95Q06142 861 aaKnown RBP7.01□□□□□ -1.29
NUP49YGL172W AIM41Q12032 185 aa7.01□□□□□ -1.29
NUP49YGL172W LCB4Q12246 624 aa7.01□□□□□ -1.29
NUP49YGL172W SVS1Q12254 260 aa7.01□□□□□ -1.29
NUP49YGL172W RAD10P06838 210 aa7.01□□□□□ -1.29
NUP49YGL172W TUB3P09734 445 aaKnown RBP7.01□□□□□ -1.29
NUP49YGL172W RAM1P22007 431 aa7.01□□□□□ -1.29
NUP49YGL172W PPH22P23595 377 aa7.01□□□□□ -1.29
NUP49YGL172W HXT3P32466 567 aaKnown RBP7.01□□□□□ -1.29
NUP49YGL172W ISF1P32488 338 aa7.01□□□□□ -1.29
NUP49YGL172W COY1P34237 679 aa7.01□□□□□ -1.29
NUP49YGL172W ECM13P38195 257 aa7.01□□□□□ -1.29
NUP49YGL172W URA8P38627 578 aaPredicted RBP7.01□□□□□ -1.29
NUP49YGL172W PRM9P39551 298 aa7.01□□□□□ -1.29
NUP49YGL172W ERP2P39704 215 aa7.01□□□□□ -1.29
NUP49YGL172W YIL161WP40449 235 aaKnown RBP7.01□□□□□ -1.29
NUP49YGL172W MKT1P40850 830 aaKnown RBP7.01□□□□□ -1.29
NUP49YGL172W UFE1P41834 346 aa7.01□□□□□ -1.29
NUP49YGL172W CNN1P43618 361 aa7.01□□□□□ -1.29
NUP49YGL172W DAN4P47179 1161 aa7.01□□□□□ -1.29
NUP49YGL172W RIM8P53179 542 aa7.01□□□□□ -1.29
NUP49YGL172W PIR3Q03180 325 aa7.01□□□□□ -1.29
NUP49YGL172W VPS60Q03390 229 aa7.01□□□□□ -1.29
NUP49YGL172W PML39Q03760 334 aa7.01□□□□□ -1.29
NUP49YGL172W URH1Q04179 340 aa7.01□□□□□ -1.29
NUP49YGL172W ARA2Q04212 335 aa7.01□□□□□ -1.29
NUP49YGL172W ECI1Q05871 280 aa7.01□□□□□ -1.29
NUP49YGL172W THI7Q05998 598 aa7.01□□□□□ -1.29
NUP49YGL172W PUF2Q12221 1075 aaKnown RBP RIP-Chip data7.01□□□□□ -1.29 RIP-Chip
NUP49YGL172W MET16P18408 261 aaPredicted RBP7□□□□□ -1.29
NUP49YGL172W SFL1P20134 766 aa7□□□□□ -1.29
NUP49YGL172W SLY1P22213 666 aa7□□□□□ -1.29
NUP49YGL172W STE11P23561 717 aa7□□□□□ -1.29
NUP49YGL172W DPB3P27344 201 aa7□□□□□ -1.29
NUP49YGL172W YEL043WP32618 956 aa7□□□□□ -1.29
NUP49YGL172W SPC42P36094 363 aa7□□□□□ -1.29
NUP49YGL172W FSH1P38777 243 aaKnown RBP7□□□□□ -1.29
NUP49YGL172W FLC2P39719 783 aa7□□□□□ -1.29
NUP49YGL172W SAW1P39735 261 aa7□□□□□ -1.29
NUP49YGL172W MAD1P40957 749 aa7□□□□□ -1.29
NUP49YGL172W MDJ2P42834 146 aa7□□□□□ -1.29
NUP49YGL172W LSB6P42951 607 aa7□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 39.1 ms