RNA–Protein interactions for RNA: YDR404C

RPB7, Transcript of RNA polymerase II subunit B16, yeast

Gene RPB7, Length 516 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPB7	YDR404C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	5.24	□□□□□ -1.57	not detected
RPB7	YDR404C	IME1	P21190	360 aa		5.24	□□□□□ -1.57
RPB7	YDR404C	CAD1	P24813	409 aa	Known RBP	5.24	□□□□□ -1.57
RPB7	YDR404C	PET309	P32522	965 aa	Predicted RBP	5.24	□□□□□ -1.57
RPB7	YDR404C	PET127	P32606	800 aa		5.24	□□□□□ -1.57
RPB7	YDR404C	APL2	P36000	726 aa	Predicted RBP	5.24	□□□□□ -1.57
RPB7	YDR404C	YHR112C	P38716	378 aa		5.24	□□□□□ -1.57
RPB7	YDR404C	STL1	P39932	569 aa		5.24	□□□□□ -1.57
RPB7	YDR404C	ENP2	P48234	707 aa	Known RBP	5.24	□□□□□ -1.57
RPB7	YDR404C	TEP1	P53916	434 aa		5.24	□□□□□ -1.57
RPB7	YDR404C	MOT3	P54785	490 aa	Known RBP	5.24	□□□□□ -1.57
RPB7	YDR404C	REC102	Q02721	264 aa		5.24	□□□□□ -1.57
RPB7	YDR404C	RCR2	Q03446	210 aa	Known RBP	5.24	□□□□□ -1.57
RPB7	YDR404C	HLR1	Q04429	423 aa		5.24	□□□□□ -1.57
RPB7	YDR404C	MCM21	Q06675	368 aa		5.24	□□□□□ -1.57
RPB7	YDR404C	VPS36	Q06696	566 aa		5.24	□□□□□ -1.57
RPB7	YDR404C	ARP7	Q12406	477 aa		5.24	□□□□□ -1.57
RPB7	YDR404C	MSH1	P25846	959 aa		5.23	□□□□□ -1.57
RPB7	YDR404C	SCS2	P40075	244 aa	Known RBP	5.23	□□□□□ -1.57
RPB7	YDR404C	VID27	P40157	782 aa		5.23	□□□□□ -1.57
RPB7	YDR404C	YNL195C	P40168	261 aa		5.23	□□□□□ -1.57
RPB7	YDR404C	RPT2	P40327	437 aa	Known RBP	5.23	□□□□□ -1.57
RPB7	YDR404C	SAP185	P40856	1058 aa		5.23	□□□□□ -1.57
RPB7	YDR404C	PUS4	P48567	403 aa	Known RBP	5.23	□□□□□ -1.57
RPB7	YDR404C	AIM39	Q08223	395 aa		5.23	□□□□□ -1.57
RPB7	YDR404C	SGO1	Q08490	590 aa		5.23	□□□□□ -1.57
RPB7	YDR404C	RIM15	P43565	1770 aa		5.23	□□□□□ -1.57
RPB7	YDR404C	APC1	P53886	1748 aa		5.23	□□□□□ -1.57
RPB7	YDR404C	ADE6	P38972	1358 aa	Known RBP	5.22	□□□□□ -1.57
RPB7	YDR404C	YPT7	P32939	208 aa		5.22	□□□□□ -1.57
RPB7	YDR404C	TGL1	P34163	548 aa		5.22	□□□□□ -1.57
RPB7	YDR404C	SDS22	P36047	338 aa		5.22	□□□□□ -1.57
RPB7	YDR404C	RPP1	P38786	293 aa		5.22	□□□□□ -1.57
RPB7	YDR404C	ECM1	P39715	212 aa		5.22	□□□□□ -1.57
RPB7	YDR404C	COX18	P53239	316 aa		5.22	□□□□□ -1.57
RPB7	YDR404C	MRPS35	P53292	345 aa		5.22	□□□□□ -1.57
RPB7	YDR404C	SUN4	P53616	420 aa		5.22	□□□□□ -1.57
RPB7	YDR404C	KIN4	Q01919	800 aa		5.22	□□□□□ -1.57
RPB7	YDR404C	NRG1	Q03125	231 aa		5.22	□□□□□ -1.57
RPB7	YDR404C	HMO1	Q03973	246 aa	Known RBP	5.22	□□□□□ -1.57
RPB7	YDR404C	TMA64	Q04600	565 aa	Known RBP	5.22	□□□□□ -1.57
RPB7	YDR404C	SLM3	Q12093	417 aa		5.22	□□□□□ -1.57
RPB7	YDR404C	PSF3	Q12146	194 aa		5.22	□□□□□ -1.57
RPB7	YDR404C	ADH4	P10127	382 aa		5.21	□□□□□ -1.58
RPB7	YDR404C	MSM1	P22438	575 aa		5.21	□□□□□ -1.58
RPB7	YDR404C	ERG6	P25087	383 aa	Known RBP	5.21	□□□□□ -1.58
RPB7	YDR404C	KAR4	P25583	335 aa		5.21	□□□□□ -1.58
RPB7	YDR404C	DEF1	P35732	738 aa	Known RBP	5.21	□□□□□ -1.58
RPB7	YDR404C	APT2	P36973	181 aa		5.21	□□□□□ -1.58
RPB7	YDR404C	BUD8	P41698	603 aa		5.21	□□□□□ -1.58
RPB7	YDR404C	PXA1	P41909	870 aa		5.21	□□□□□ -1.58
RPB7	YDR404C	ERR3	P42222	437 aa		5.21	□□□□□ -1.58
RPB7	YDR404C	TAF4	P50105	388 aa		5.21	□□□□□ -1.58
RPB7	YDR404C	TEX1	P53851	422 aa	Known RBP	5.21	□□□□□ -1.58
RPB7	YDR404C	NSE5	Q03718	556 aa		5.21	□□□□□ -1.58
RPB7	YDR404C	CIA1	Q05583	330 aa		5.21	□□□□□ -1.58
RPB7	YDR404C	TGL5	Q12043	749 aa		5.21	□□□□□ -1.58
RPB7	YDR404C	RTK1	Q12100	620 aa	Predicted RBP	5.21	□□□□□ -1.58
RPB7	YDR404C	TRM11	Q12463	433 aa		5.21	□□□□□ -1.58
RPB7	YDR404C	RNR1	P21524	888 aa	Known RBP	5.2	□□□□□ -1.58
RPB7	YDR404C	CTF13	P35203	478 aa		5.2	□□□□□ -1.58
RPB7	YDR404C	YHR033W	P38690	423 aa		5.2	□□□□□ -1.58
RPB7	YDR404C	VPS27	P40343	622 aa	Known RBP	5.2	□□□□□ -1.58
RPB7	YDR404C	MAD2	P40958	196 aa		5.2	□□□□□ -1.58
RPB7	YDR404C	MAD3	P47074	515 aa		5.2	□□□□□ -1.58
RPB7	YDR404C	YML131W	Q03102	365 aa		5.2	□□□□□ -1.58
RPB7	YDR404C	ENB1	Q08299	606 aa		5.2	□□□□□ -1.58
RPB7	YDR404C	YLR278C	Q05854	1341 aa		5.2	□□□□□ -1.58
RPB7	YDR404C	VAS1	P07806	1104 aa	Known RBP	5.19	□□□□□ -1.58
RPB7	YDR404C	HRR25	P29295	494 aa	Known RBP	5.19	□□□□□ -1.58
RPB7	YDR404C	SSH4	P32343	579 aa		5.19	□□□□□ -1.58
RPB7	YDR404C	APM3	P38153	483 aa		5.19	□□□□□ -1.58
RPB7	YDR404C	SSP120	P39931	234 aa	Known RBP	5.19	□□□□□ -1.58
RPB7	YDR404C	BIT61	P47041	543 aa		5.19	□□□□□ -1.58
RPB7	YDR404C	NOP9	P47077	666 aa	Known RBP	5.19	□□□□□ -1.58
RPB7	YDR404C	MNT2	P53059	558 aa		5.19	□□□□□ -1.58
RPB7	YDR404C	VBA4	Q04602	768 aa	Known RBP	5.19	□□□□□ -1.58
RPB7	YDR404C	GAD1	Q04792	585 aa		5.19	□□□□□ -1.58
RPB7	YDR404C	DIN7	Q12086	430 aa		5.19	□□□□□ -1.58
RPB7	YDR404C	ECM3	Q99252	613 aa		5.19	□□□□□ -1.58
RPB7	YDR404C	HRP1	Q99383	534 aa	Known RBP	5.19	□□□□□ -1.58
RPB7	YDR404C	SPT7	P35177	1332 aa		5.19	□□□□□ -1.58
RPB7	YDR404C	MHP1	P43638	1398 aa		5.18	□□□□□ -1.58
RPB7	YDR404C	CTT1	P06115	562 aa		5.18	□□□□□ -1.58
RPB7	YDR404C	ERG20	P08524	352 aa	Known RBP	5.18	□□□□□ -1.58
RPB7	YDR404C	CBP3	P21560	335 aa		5.18	□□□□□ -1.58
RPB7	YDR404C	SWD1	P39706	426 aa		5.18	□□□□□ -1.58
RPB7	YDR404C	SPC72	P39723	622 aa		5.18	□□□□□ -1.58
RPB7	YDR404C	IMA5	P40884	581 aa		5.18	□□□□□ -1.58
RPB7	YDR404C	FKH2	P41813	862 aa		5.18	□□□□□ -1.58
RPB7	YDR404C	PPN1	Q04119	674 aa		5.18	□□□□□ -1.58
RPB7	YDR404C	MCH5	Q08777	521 aa		5.18	□□□□□ -1.58
RPB7	YDR404C	VPS5	Q92331	675 aa		5.18	□□□□□ -1.58
RPB7	YDR404C	RPA135	P22138	1203 aa	Known RBP	5.17	□□□□□ -1.58
RPB7	YDR404C	PRE4	P30657	266 aa		5.17	□□□□□ -1.58
RPB7	YDR404C	MTC7	P32633	139 aa		5.17	□□□□□ -1.58
RPB7	YDR404C	BEM3	P32873	1128 aa		5.17	□□□□□ -1.58
RPB7	YDR404C	RMA1	P36001	430 aa	Known RBP	5.17	□□□□□ -1.58
RPB7	YDR404C	LYS9	P38999	446 aa		5.17	□□□□□ -1.58
RPB7	YDR404C	GET2	P40056	285 aa		5.17	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms