RNA–Protein interactions for RNA: YDR055W

PST1, Transcript of Cell wall protein that contains a putative GPI-attachment site, yeast

Gene PST1, Length 1,335 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PST1	YDR055W	SQS1	P53866	767 aa	Known RBP	4.64	□□□□□ -1.67
PST1	YDR055W	SVL3	Q03088	825 aa	Known RBP	4.64	□□□□□ -1.67
PST1	YDR055W	HLR1	Q04429	423 aa		4.64	□□□□□ -1.67
PST1	YDR055W	TMA64	Q04600	565 aa	Known RBP	4.64	□□□□□ -1.67
PST1	YDR055W	RPS9B	P05755	195 aa	Known RBP	4.63	□□□□□ -1.67
PST1	YDR055W	CBP3	P21560	335 aa		4.63	□□□□□ -1.67
PST1	YDR055W	KIN82	P25341	720 aa		4.63	□□□□□ -1.67
PST1	YDR055W	RMA1	P36001	430 aa	Known RBP	4.63	□□□□□ -1.67
PST1	YDR055W	TAF5	P38129	798 aa		4.63	□□□□□ -1.67
PST1	YDR055W	APM3	P38153	483 aa		4.63	□□□□□ -1.67
PST1	YDR055W	SWD1	P39706	426 aa		4.63	□□□□□ -1.67
PST1	YDR055W	MAD2	P40958	196 aa		4.63	□□□□□ -1.67
PST1	YDR055W	ERR3	P42222	437 aa		4.63	□□□□□ -1.67
PST1	YDR055W	YML131W	Q03102	365 aa		4.63	□□□□□ -1.67
PST1	YDR055W	DIN7	Q12086	430 aa		4.63	□□□□□ -1.67
PST1	YDR055W	POM34	Q12445	299 aa		4.63	□□□□□ -1.67
PST1	YDR055W	VPS5	Q92331	675 aa		4.63	□□□□□ -1.67
PST1	YDR055W	PRP28	P23394	588 aa		4.62	□□□□□ -1.67
PST1	YDR055W	PRE4	P30657	266 aa		4.62	□□□□□ -1.67
PST1	YDR055W	BCS1	P32839	456 aa		4.62	□□□□□ -1.67
PST1	YDR055W	GLG1	P36143	616 aa		4.62	□□□□□ -1.67
PST1	YDR055W	PIG2	P40187	538 aa		4.62	□□□□□ -1.67
PST1	YDR055W	YIL166C	P40445	542 aa		4.62	□□□□□ -1.67
PST1	YDR055W	IML2	P47031	731 aa		4.62	□□□□□ -1.67
PST1	YDR055W	CTR1	P49573	406 aa		4.62	□□□□□ -1.67
PST1	YDR055W	MNT2	P53059	558 aa		4.62	□□□□□ -1.67
PST1	YDR055W	MDR1	P53258	950 aa		4.62	□□□□□ -1.67
PST1	YDR055W	BLS1	Q06071	122 aa		4.62	□□□□□ -1.67
PST1	YDR055W	USV1	Q12132	391 aa		4.62	□□□□□ -1.67
PST1	YDR055W	HOS1	Q12214	470 aa		4.62	□□□□□ -1.67
PST1	YDR055W	CWH43	P25618	953 aa		4.61	□□□□□ -1.67
PST1	YDR055W	BEM3	P32873	1128 aa		4.61	□□□□□ -1.67
PST1	YDR055W	CUE2	P36075	443 aa	Known RBP	4.61	□□□□□ -1.67
PST1	YDR055W	SET3	P36124	751 aa		4.61	□□□□□ -1.67
PST1	YDR055W	PPE1	P38796	400 aa		4.61	□□□□□ -1.67
PST1	YDR055W	PEF1	P53238	335 aa		4.61	□□□□□ -1.67
PST1	YDR055W	DBP10	Q12389	995 aa	Known RBP	4.61	□□□□□ -1.67
PST1	YDR055W	PRM2	P40534	656 aa		4.6	□□□□□ -1.67
PST1	YDR055W	IMA5	P40884	581 aa		4.6	□□□□□ -1.67
PST1	YDR055W	YNR071C	P53757	342 aa		4.6	□□□□□ -1.67
PST1	YDR055W	TRI1	Q05024	226 aa		4.6	□□□□□ -1.67
PST1	YDR055W	CIA1	Q05583	330 aa		4.6	□□□□□ -1.67
PST1	YDR055W	CHS5	Q12114	671 aa	Known RBP	4.6	□□□□□ -1.67
PST1	YDR055W	BNR1	P40450	1375 aa		4.6	□□□□□ -1.67
PST1	YDR055W	SSM4	P40318	1319 aa		4.59	□□□□□ -1.67
PST1	YDR055W	URA3	P03962	267 aa		4.59	□□□□□ -1.67
PST1	YDR055W	MCM3	P24279	971 aa	Known RBP	4.59	□□□□□ -1.67
PST1	YDR055W	ADY2	P25613	283 aa		4.59	□□□□□ -1.67
PST1	YDR055W	FEN2	P25621	512 aa	Known RBP	4.59	□□□□□ -1.67
PST1	YDR055W	MTC7	P32633	139 aa		4.59	□□□□□ -1.67
PST1	YDR055W	PPZ2	P33329	710 aa		4.59	□□□□□ -1.67
PST1	YDR055W	CDS1	P38221	457 aa		4.59	□□□□□ -1.67
PST1	YDR055W	ERP2	P39704	215 aa		4.59	□□□□□ -1.67
PST1	YDR055W	SPC72	P39723	622 aa		4.59	□□□□□ -1.67
PST1	YDR055W	SPO1	P53541	631 aa		4.59	□□□□□ -1.67
PST1	YDR055W	ACS1	Q01574	713 aa		4.59	□□□□□ -1.67
PST1	YDR055W	YML122C	Q03207	126 aa		4.59	□□□□□ -1.67
PST1	YDR055W	TRS130	Q03660	1102 aa		4.59	□□□□□ -1.67
PST1	YDR055W	NUC1	P08466	329 aa		4.58	□□□□□ -1.68
PST1	YDR055W	HMG2	P12684	1045 aa		4.58	□□□□□ -1.68
PST1	YDR055W	GFD2	P25370	566 aa	Known RBP	4.58	□□□□□ -1.68
PST1	YDR055W	ILV6	P25605	309 aa	Known RBP	4.58	□□□□□ -1.68
PST1	YDR055W	FUB1	P25659	250 aa		4.58	□□□□□ -1.68
PST1	YDR055W	EMP70	P32802	667 aa		4.58	□□□□□ -1.68
PST1	YDR055W	COS111	P38308	924 aa		4.58	□□□□□ -1.68
PST1	YDR055W	CRG1	P38892	291 aa	RIP-Chip data	4.58	□□□□□ -1.68	not detected
PST1	YDR055W	YIL077C	P40508	320 aa		4.58	□□□□□ -1.68
PST1	YDR055W	FAF1	P40546	346 aa	Predicted RBP	4.58	□□□□□ -1.68
PST1	YDR055W	YGR151C	P53287	111 aa		4.58	□□□□□ -1.68
PST1	YDR055W	GTR1	Q00582	310 aa		4.58	□□□□□ -1.68
PST1	YDR055W	SSP2	Q08646	371 aa		4.58	□□□□□ -1.68
PST1	YDR055W	AIM41	Q12032	185 aa		4.58	□□□□□ -1.68
PST1	YDR055W	NDJ1	Q12366	352 aa		4.58	□□□□□ -1.68
PST1	YDR055W	PHO5	P00635	467 aa		4.57	□□□□□ -1.68
PST1	YDR055W	MIS1	P09440	975 aa	Known RBP	4.57	□□□□□ -1.68
PST1	YDR055W	TUB1	P09733	447 aa	Known RBP	4.57	□□□□□ -1.68
PST1	YDR055W	ABF1	P14164	731 aa		4.57	□□□□□ -1.68
PST1	YDR055W	POL3	P15436	1097 aa		4.57	□□□□□ -1.68
PST1	YDR055W	RPA135	P22138	1203 aa	Known RBP	4.57	□□□□□ -1.68
PST1	YDR055W	ARG1	P22768	420 aa		4.57	□□□□□ -1.68
PST1	YDR055W	PSY4	P38193	441 aa		4.57	□□□□□ -1.68
PST1	YDR055W	RIX1	P38883	763 aa	Predicted RBP	4.57	□□□□□ -1.68
PST1	YDR055W	STT3	P39007	718 aa	Known RBP	4.57	□□□□□ -1.68
PST1	YDR055W	YEL020C	P39994	560 aa		4.57	□□□□□ -1.68
PST1	YDR055W	FTR1	P40088	404 aa		4.57	□□□□□ -1.68
PST1	YDR055W	SMK1	P41808	388 aa		4.57	□□□□□ -1.68
PST1	YDR055W	RFX1	P48743	811 aa		4.57	□□□□□ -1.68
PST1	YDR055W	APM1	Q00776	475 aa	Predicted RBP	4.57	□□□□□ -1.68
PST1	YDR055W	MRPL13	Q02204	264 aa		4.57	□□□□□ -1.68
PST1	YDR055W	YFT2	Q06676	274 aa		4.57	□□□□□ -1.68
PST1	YDR055W	YCG1	Q06680	1035 aa		4.57	□□□□□ -1.68
PST1	YDR055W	RPN13	O13563	156 aa		4.56	□□□□□ -1.68
PST1	YDR055W	TUF1	P02992	437 aa	Known RBP	4.56	□□□□□ -1.68
PST1	YDR055W	SPO11	P23179	398 aa		4.56	□□□□□ -1.68
PST1	YDR055W	CLB4	P24871	460 aa		4.56	□□□□□ -1.68
PST1	YDR055W	GMH1	P36125	273 aa		4.56	□□□□□ -1.68
PST1	YDR055W	YLF2	P38746	405 aa		4.56	□□□□□ -1.68
PST1	YDR055W	PUG1	P40100	303 aa		4.56	□□□□□ -1.68
PST1	YDR055W	PSF2	P40359	213 aa		4.56	□□□□□ -1.68
PST1	YDR055W	MPS3	P47069	682 aa		4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms