RNA–Protein interactions for RNA: YDL042C

SIR2, Transcript of Conserved NAD+ dependent histone deacetylase of the Sirtuin family, yeast

Gene SIR2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR2	YDL042C	YGR151C	P53287	111 aa		6.73	□□□□□ -1.33
SIR2	YDL042C	TRI1	Q05024	226 aa		6.73	□□□□□ -1.33
SIR2	YDL042C	HIM1	Q06674	414 aa		6.73	□□□□□ -1.33
SIR2	YDL042C	BRE1	Q07457	700 aa	Known RBP	6.73	□□□□□ -1.33
SIR2	YDL042C	MCH5	Q08777	521 aa		6.73	□□□□□ -1.33
SIR2	YDL042C	MDS3	P53094	1487 aa		6.72	□□□□□ -1.33
SIR2	YDL042C	SET3	P36124	751 aa		6.72	□□□□□ -1.33
SIR2	YDL042C	YHR097C	P38809	366 aa	Known RBP	6.72	□□□□□ -1.33
SIR2	YDL042C	YGR054W	P53235	642 aa	Known RBP	6.72	□□□□□ -1.33
SIR2	YDL042C	ATG4	P53867	494 aa		6.72	□□□□□ -1.33
SIR2	YDL042C	MOT3	P54785	490 aa	Known RBP	6.72	□□□□□ -1.33
SIR2	YDL042C	YSH1	Q06224	779 aa	Predicted RBP	6.72	□□□□□ -1.33
SIR2	YDL042C	MSH1	P25846	959 aa		6.71	□□□□□ -1.33
SIR2	YDL042C	FUI1	P38196	639 aa		6.71	□□□□□ -1.33
SIR2	YDL042C	CHS7	P38843	316 aa		6.71	□□□□□ -1.33
SIR2	YDL042C	IMA5	P40884	581 aa		6.71	□□□□□ -1.33
SIR2	YDL042C	MAD3	P47074	515 aa		6.71	□□□□□ -1.33
SIR2	YDL042C	SMX3	P54999	86 aa	Predicted RBP	6.71	□□□□□ -1.33
SIR2	YDL042C	GSF2	Q04697	403 aa	Known RBP	6.71	□□□□□ -1.33
SIR2	YDL042C	SEC12	P11655	471 aa		6.71	□□□□□ -1.34
SIR2	YDL042C	PHO81	P17442	1178 aa		6.71	□□□□□ -1.34
SIR2	YDL042C	ELF1	P36053	145 aa		6.71	□□□□□ -1.34
SIR2	YDL042C	VPS27	P40343	622 aa	Known RBP	6.71	□□□□□ -1.34
SIR2	YDL042C	NDC80	P40460	691 aa		6.71	□□□□□ -1.34
SIR2	YDL042C	STB4	P50104	949 aa		6.71	□□□□□ -1.34
SIR2	YDL042C	UBA2	P52488	636 aa		6.71	□□□□□ -1.34
SIR2	YDL042C	TIM44	Q01852	431 aa		6.71	□□□□□ -1.34
SIR2	YDL042C	ARR3	Q06598	404 aa		6.71	□□□□□ -1.34
SIR2	YDL042C	REV3	P14284	1504 aa		6.7	□□□□□ -1.34
SIR2	YDL042C	APA1	P16550	321 aa	Known RBP	6.7	□□□□□ -1.34
SIR2	YDL042C	PTH2	P34222	208 aa		6.7	□□□□□ -1.34
SIR2	YDL042C	PPE1	P38796	400 aa		6.7	□□□□□ -1.34
SIR2	YDL042C	IES5	P40060	125 aa		6.7	□□□□□ -1.34
SIR2	YDL042C	LRO1	P40345	661 aa		6.7	□□□□□ -1.34
SIR2	YDL042C	ARG2	P40360	574 aa		6.7	□□□□□ -1.34
SIR2	YDL042C	HBT1	Q07653	1046 aa	Known RBP	6.7	□□□□□ -1.34
SIR2	YDL042C	PCK1	P10963	549 aa		6.69	□□□□□ -1.34
SIR2	YDL042C	SEC18	P18759	758 aa	Known RBP	6.69	□□□□□ -1.34
SIR2	YDL042C	VPS33	P20795	691 aa		6.69	□□□□□ -1.34
SIR2	YDL042C	APL3	P38065	1025 aa		6.69	□□□□□ -1.34
SIR2	YDL042C	YLF2	P38746	405 aa		6.69	□□□□□ -1.34
SIR2	YDL042C	YJL193W	P39542	402 aa		6.69	□□□□□ -1.34
SIR2	YDL042C	ACA1	P39970	489 aa		6.69	□□□□□ -1.34
SIR2	YDL042C	CTR1	P49573	406 aa		6.69	□□□□□ -1.34
SIR2	YDL042C	DIP5	P53388	608 aa		6.69	□□□□□ -1.34
SIR2	YDL042C	ATG2	P53855	1592 aa		6.69	□□□□□ -1.34
SIR2	YDL042C	TOP1	P04786	769 aa		6.68	□□□□□ -1.34
SIR2	YDL042C	DHR2	P36009	735 aa	Predicted RBP	6.68	□□□□□ -1.34
SIR2	YDL042C	APM3	P38153	483 aa		6.68	□□□□□ -1.34
SIR2	YDL042C	KSP1	P38691	1029 aa	Known RBP	6.68	□□□□□ -1.34
SIR2	YDL042C	GSM1	P42950	618 aa		6.68	□□□□□ -1.34
SIR2	YDL042C	NMA2	P53204	395 aa		6.68	□□□□□ -1.34
SIR2	YDL042C	YGR021W	P53212	290 aa		6.68	□□□□□ -1.34
SIR2	YDL042C	CEF1	Q03654	590 aa	Predicted RBP	6.68	□□□□□ -1.34
SIR2	YDL042C	SIN3	P22579	1536 aa		6.68	□□□□□ -1.34
SIR2	YDL042C	CTF4	Q01454	927 aa		6.68	□□□□□ -1.34
SIR2	YDL042C	EFR3	Q03653	782 aa	Known RBP	6.68	□□□□□ -1.34
SIR2	YDL042C	MRPL7	P36519	292 aa		6.67	□□□□□ -1.34
SIR2	YDL042C	TRX2	P22803	104 aa	Known RBP	6.66	□□□□□ -1.34
SIR2	YDL042C	MRS6	P32864	603 aa	Known RBP	6.66	□□□□□ -1.34
SIR2	YDL042C	GLG1	P36143	616 aa		6.66	□□□□□ -1.34
SIR2	YDL042C	UBS1	P38290	277 aa		6.66	□□□□□ -1.34
SIR2	YDL042C	STT3	P39007	718 aa	Known RBP	6.66	□□□□□ -1.34
SIR2	YDL042C	SLI1	P53304	468 aa		6.66	□□□□□ -1.34
SIR2	YDL042C	ACS1	Q01574	713 aa		6.66	□□□□□ -1.34
SIR2	YDL042C	UFO1	Q04511	668 aa		6.66	□□□□□ -1.34
SIR2	YDL042C	RKI1	Q12189	258 aa		6.66	□□□□□ -1.34
SIR2	YDL042C	DBF20	P32328	564 aa		6.65	□□□□□ -1.34
SIR2	YDL042C	MOH1	P38191	138 aa		6.65	□□□□□ -1.34
SIR2	YDL042C	RPT2	P40327	437 aa	Known RBP	6.65	□□□□□ -1.34
SIR2	YDL042C	SNF12	P53628	566 aa		6.65	□□□□□ -1.34
SIR2	YDL042C	CRD1	Q07560	283 aa		6.65	□□□□□ -1.34
SIR2	YDL042C	AAD4	Q07747	329 aa		6.65	□□□□□ -1.34
SIR2	YDL042C	CAP1	P28495	268 aa	Known RBP	6.65	□□□□□ -1.35
SIR2	YDL042C	GMH1	P36125	273 aa		6.65	□□□□□ -1.35
SIR2	YDL042C	VFA1	P40080	203 aa		6.65	□□□□□ -1.35
SIR2	YDL042C	PNS1	Q12412	539 aa		6.65	□□□□□ -1.35
SIR2	YDL042C	MSM1	P22438	575 aa		6.64	□□□□□ -1.35
SIR2	YDL042C	DSS4	P32601	143 aa		6.64	□□□□□ -1.35
SIR2	YDL042C	STB5	P38699	743 aa		6.64	□□□□□ -1.35
SIR2	YDL042C	THI6	P41835	540 aa		6.64	□□□□□ -1.35
SIR2	YDL042C	BMS1	Q08965	1183 aa	Known RBP	6.64	□□□□□ -1.35
SIR2	YDL042C	PHO5	P00635	467 aa		6.63	□□□□□ -1.35
SIR2	YDL042C	DPB3	P27344	201 aa		6.63	□□□□□ -1.35
SIR2	YDL042C	OAR1	P35731	278 aa		6.63	□□□□□ -1.35
SIR2	YDL042C	YJL206C	P39529	758 aa		6.63	□□□□□ -1.35
SIR2	YDL042C	SPC72	P39723	622 aa		6.63	□□□□□ -1.35
SIR2	YDL042C	SDS3	P40505	327 aa		6.63	□□□□□ -1.35
SIR2	YDL042C	POL31	P46957	487 aa		6.63	□□□□□ -1.35
SIR2	YDL042C	SPC98	P53540	846 aa		6.63	□□□□□ -1.35
SIR2	YDL042C	DAK1	P54838	584 aa	Known RBP	6.63	□□□□□ -1.35
SIR2	YDL042C	MFM1	Q02783	413 aa		6.63	□□□□□ -1.35
SIR2	YDL042C	ENT2	Q05785	613 aa		6.63	□□□□□ -1.35
SIR2	YDL042C	LAM4	P38800	1345 aa		6.63	□□□□□ -1.35
SIR2	YDL042C	POL3	P15436	1097 aa		6.62	□□□□□ -1.35
SIR2	YDL042C	MCM3	P24279	971 aa	Known RBP	6.62	□□□□□ -1.35
SIR2	YDL042C	BDH2	P39713	417 aa		6.62	□□□□□ -1.35
SIR2	YDL042C	EIS1	Q05050	843 aa	Known RBP	6.62	□□□□□ -1.35
SIR2	YDL042C	HOF1	Q05080	669 aa		6.62	□□□□□ -1.35
SIR2	YDL042C	SIR1	P21691	654 aa		6.61	□□□□□ -1.35

Retrieved 100 of 5,963 RNA–protein pairs in 106.3 ms