RNA–Protein interactions for RNA: YBR228W

SLX1, Transcript of Endonuclease involved in DNA recombination and repair, yeast

Gene SLX1, Length 915 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLX1	YBR228W	UGP1	P32861	499 aa	Known RBP	5.49	□□□□□ -1.53
SLX1	YBR228W	ELF1	P36053	145 aa		5.49	□□□□□ -1.53
SLX1	YBR228W	YLR001C	Q07895	862 aa		5.49	□□□□□ -1.53
SLX1	YBR228W	ICT1	Q12385	394 aa		5.49	□□□□□ -1.53
SLX1	YBR228W	MLP1	Q02455	1875 aa	Known RBP	5.49	□□□□□ -1.53
SLX1	YBR228W	NUP1	P20676	1076 aa		5.48	□□□□□ -1.53
SLX1	YBR228W	YMC1	P32331	307 aa		5.48	□□□□□ -1.53
SLX1	YBR228W	YNL193W	P53870	558 aa		5.48	□□□□□ -1.53
SLX1	YBR228W	ORC1	P54784	914 aa	Predicted RBP	5.48	□□□□□ -1.53
SLX1	YBR228W	MSS1	P32559	526 aa	Predicted RBP	5.47	□□□□□ -1.53
SLX1	YBR228W	NGL2	Q03264	515 aa	Known RBP	5.47	□□□□□ -1.53
SLX1	YBR228W	RCR2	Q03446	210 aa	Known RBP	5.47	□□□□□ -1.53
SLX1	YBR228W	YDR179W-A	Q03983	463 aa		5.47	□□□□□ -1.53
SLX1	YBR228W	UFO1	Q04511	668 aa		5.47	□□□□□ -1.53
SLX1	YBR228W	YLR407W	Q06070	228 aa		5.47	□□□□□ -1.53
SLX1	YBR228W	ULA1	Q12059	462 aa		5.47	□□□□□ -1.53
SLX1	YBR228W	TPK2	P06245	380 aa		5.46	□□□□□ -1.54
SLX1	YBR228W	TMT1	P32643	299 aa		5.46	□□□□□ -1.54
SLX1	YBR228W	YKU70	P32807	602 aa		5.46	□□□□□ -1.54
SLX1	YBR228W	TDA3	P38758	523 aa		5.46	□□□□□ -1.54
SLX1	YBR228W	BEM4	P39011	633 aa		5.46	□□□□□ -1.54
SLX1	YBR228W	SDA1	P53313	767 aa	Known RBP	5.46	□□□□□ -1.54
SLX1	YBR228W	SEC5	P89102	971 aa		5.46	□□□□□ -1.54
SLX1	YBR228W	YLR419W	Q06698	1435 aa	Known RBP	5.46	□□□□□ -1.54
SLX1	YBR228W	SFP1	P32432	683 aa		5.45	□□□□□ -1.54
SLX1	YBR228W	PPG1	P32838	368 aa		5.45	□□□□□ -1.54
SLX1	YBR228W	TAX4	P47030	604 aa		5.45	□□□□□ -1.54
SLX1	YBR228W	TRS23	Q03784	219 aa		5.45	□□□□□ -1.54
SLX1	YBR228W	TY4B-H	P0C2J7	1802 aa		5.44	□□□□□ -1.54
SLX1	YBR228W	TY4B-J	P47024	1803 aa		5.44	□□□□□ -1.54
SLX1	YBR228W	PRP22	P24384	1145 aa	Known RBP	5.44	□□□□□ -1.54
SLX1	YBR228W	PTP1	P25044	335 aa		5.44	□□□□□ -1.54
SLX1	YBR228W	XBP1	P40489	647 aa		5.44	□□□□□ -1.54
SLX1	YBR228W	SNF12	P53628	566 aa		5.44	□□□□□ -1.54
SLX1	YBR228W	YNR029C	P53729	429 aa	Known RBP	5.44	□□□□□ -1.54
SLX1	YBR228W	SPE2	P21182	396 aa		5.43	□□□□□ -1.54
SLX1	YBR228W	FPR4	Q06205	392 aa	Predicted RBP	5.43	□□□□□ -1.54
SLX1	YBR228W	YPS7	Q06325	596 aa		5.43	□□□□□ -1.54
SLX1	YBR228W	IZH3	Q07959	543 aa		5.43	□□□□□ -1.54
SLX1	YBR228W	YPT7	P32939	208 aa		5.42	□□□□□ -1.54
SLX1	YBR228W	PXA1	P41909	870 aa		5.42	□□□□□ -1.54
SLX1	YBR228W	PGK1	P00560	416 aa	Known RBP	5.41	□□□□□ -1.54
SLX1	YBR228W	RET2	P43621	546 aa		5.41	□□□□□ -1.54
SLX1	YBR228W	HFD1	Q04458	532 aa		5.41	□□□□□ -1.54
SLX1	YBR228W	TMN3	P40071	706 aa		5.4	□□□□□ -1.54
SLX1	YBR228W	MGS1	P40151	587 aa		5.4	□□□□□ -1.54
SLX1	YBR228W	GAT1	P43574	510 aa		5.4	□□□□□ -1.54
SLX1	YBR228W	DAK1	P54838	584 aa	Known RBP	5.4	□□□□□ -1.54
SLX1	YBR228W	NOP14	Q99207	810 aa	Known RBP	5.4	□□□□□ -1.54
SLX1	YBR228W	RIM4	P38741	713 aa		5.39	□□□□□ -1.55
SLX1	YBR228W	DUN1	P39009	513 aa		5.39	□□□□□ -1.55
SLX1	YBR228W	BUD8	P41698	603 aa		5.39	□□□□□ -1.55
SLX1	YBR228W	THI6	P41835	540 aa		5.39	□□□□□ -1.55
SLX1	YBR228W	NET1	P47035	1189 aa		5.39	□□□□□ -1.55
SLX1	YBR228W	BNA3	P47039	444 aa	Known RBP	5.39	□□□□□ -1.55
SLX1	YBR228W	ALG12	P53730	551 aa		5.39	□□□□□ -1.55
SLX1	YBR228W	MHP1	P43638	1398 aa		5.39	□□□□□ -1.55
SLX1	YBR228W	RRP5	Q05022	1729 aa	Known RBP	5.38	□□□□□ -1.55
SLX1	YBR228W	RPL8A	P17076	256 aa	Known RBP	5.38	□□□□□ -1.55
SLX1	YBR228W	STE4	P18851	423 aa		5.38	□□□□□ -1.55
SLX1	YBR228W	IME1	P21190	360 aa		5.38	□□□□□ -1.55
SLX1	YBR228W	APN1	P22936	367 aa		5.38	□□□□□ -1.55
SLX1	YBR228W	AAD3	P25612	363 aa		5.38	□□□□□ -1.55
SLX1	YBR228W	PRP19	P32523	503 aa	Known RBP	5.38	□□□□□ -1.55
SLX1	YBR228W	YGR153W	P48238	217 aa		5.38	□□□□□ -1.55
SLX1	YBR228W	SPO1	P53541	631 aa		5.38	□□□□□ -1.55
SLX1	YBR228W	PSK1	P31374	1356 aa		5.38	□□□□□ -1.55
SLX1	YBR228W	RPS17A	P02407	136 aa	Known RBP	5.37	□□□□□ -1.55
SLX1	YBR228W	RPS17B	P14127	136 aa	Known RBP	5.37	□□□□□ -1.55
SLX1	YBR228W	HOT13	P36078	116 aa		5.37	□□□□□ -1.55
SLX1	YBR228W	RRP14	P36080	434 aa	Known RBP	5.37	□□□□□ -1.55
SLX1	YBR228W	PPE1	P38796	400 aa		5.37	□□□□□ -1.55
SLX1	YBR228W	CKB2	P38930	258 aa		5.37	□□□□□ -1.55
SLX1	YBR228W	LTP1	P40347	161 aa		5.37	□□□□□ -1.55
SLX1	YBR228W	RNH70	P53331	553 aa		5.37	□□□□□ -1.55
SLX1	YBR228W	TIM50	Q02776	476 aa		5.37	□□□□□ -1.55
SLX1	YBR228W	MFM1	Q02783	413 aa		5.37	□□□□□ -1.55
SLX1	YBR228W	PPN1	Q04119	674 aa		5.37	□□□□□ -1.55
SLX1	YBR228W	ARG7	Q04728	441 aa		5.37	□□□□□ -1.55
SLX1	YBR228W	YIL177C	P40434	1758 aa		5.37	□□□□□ -1.55
SLX1	YBR228W	YJL225C	P40889	1758 aa		5.37	□□□□□ -1.55
SLX1	YBR228W	YJR096W	P47137	282 aa		5.36	□□□□□ -1.55
SLX1	YBR228W	NOP15	P53927	220 aa	Predicted RBP	5.36	□□□□□ -1.55
SLX1	YBR228W	STP4	Q07351	490 aa		5.36	□□□□□ -1.55
SLX1	YBR228W	AI5_ALPHA	Q9ZZX1	630 aa		5.36	□□□□□ -1.55
SLX1	YBR228W	YML133C	Q03099	1374 aa		5.36	□□□□□ -1.55
SLX1	YBR228W	YLL067C	Q07888	1374 aa		5.36	□□□□□ -1.55
SLX1	YBR228W	YLL066C	Q99208	1374 aa		5.36	□□□□□ -1.55
SLX1	YBR228W	ADR1	P07248	1323 aa		5.35	□□□□□ -1.55
SLX1	YBR228W	SWI6	P09959	803 aa		5.35	□□□□□ -1.55
SLX1	YBR228W	HLJ1	P48353	224 aa		5.35	□□□□□ -1.55
SLX1	YBR228W	YGL117W	P53133	265 aa		5.35	□□□□□ -1.55
SLX1	YBR228W	TUP1	P16649	713 aa		5.34	□□□□□ -1.55
SLX1	YBR228W	PIH1	P38768	344 aa		5.34	□□□□□ -1.55
SLX1	YBR228W	MNN1	P39106	762 aa		5.34	□□□□□ -1.55
SLX1	YBR228W	ATG36	P46983	293 aa		5.34	□□□□□ -1.55
SLX1	YBR228W	YIP4	P53093	235 aa		5.34	□□□□□ -1.55
SLX1	YBR228W	CPR8	P53728	308 aa		5.34	□□□□□ -1.55
SLX1	YBR228W	RPS21B	Q3E754	87 aa	Known RBP	5.34	□□□□□ -1.55
SLX1	YBR228W	YRF1-2	P40105	1681 aa		5.34	□□□□□ -1.56

Retrieved 100 of 5,963 RNA–protein pairs in 67.3 ms