RNA–Protein interactions for RNA: RDN18-1

RDN18-1, Transcript of 18S ribosomal RNA (18S rRNA), yeastyeast

Gene RDN18-1, Length 1,800 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDN18-1RDN18-1 RNY1Q02933 434 aaKnown RBP10.56□□□□□ -0.72
RDN18-1RDN18-1 SLP1Q12232 587 aa10.56□□□□□ -0.72
RDN18-1RDN18-1 GPM3Q12326 303 aa10.56□□□□□ -0.72
RDN18-1RDN18-1 ARD1P07347 238 aaPredicted RBP10.55□□□□□ -0.72
RDN18-1RDN18-1 SNA3P14359 133 aa10.55□□□□□ -0.72
RDN18-1RDN18-1 AIM26P32858 118 aa10.55□□□□□ -0.72
RDN18-1RDN18-1 RFC3P38629 340 aa10.55□□□□□ -0.72
RDN18-1RDN18-1 INP51P40559 946 aaKnown RBP10.55□□□□□ -0.72
RDN18-1RDN18-1 RRT5P43607 289 aa10.55□□□□□ -0.72
RDN18-1RDN18-1 RTA1P53047 317 aa10.55□□□□□ -0.72
RDN18-1RDN18-1 FMP25Q08023 583 aa10.55□□□□□ -0.72
RDN18-1RDN18-1 CUE5Q08412 411 aaKnown RBP10.55□□□□□ -0.72
RDN18-1RDN18-1 TSR4P25040 408 aa10.54□□□□□ -0.72
RDN18-1RDN18-1 RAD5P32849 1169 aaPredicted RBP10.54□□□□□ -0.72
RDN18-1RDN18-1 PRY3P47033 881 aa10.54□□□□□ -0.72
RDN18-1RDN18-1 NNF2P53253 936 aa10.54□□□□□ -0.72
RDN18-1RDN18-1 SLT2Q00772 484 aa10.54□□□□□ -0.72
RDN18-1RDN18-1 TPO1Q07824 586 aa10.54□□□□□ -0.72
RDN18-1RDN18-1 THI20Q08224 551 aa10.54□□□□□ -0.72
RDN18-1RDN18-1 CIR2Q08822 631 aa10.54□□□□□ -0.72
RDN18-1RDN18-1 GNT1Q12096 491 aa10.54□□□□□ -0.72
RDN18-1RDN18-1 RIM101P33400 625 aa10.54□□□□□ -0.72
RDN18-1RDN18-1 REV7P38927 245 aa10.54□□□□□ -0.72
RDN18-1RDN18-1 SIP5P40210 489 aaKnown RBP10.54□□□□□ -0.72
RDN18-1RDN18-1 RFX1P48743 811 aa10.54□□□□□ -0.72
RDN18-1RDN18-1 YOR022CQ12204 715 aa10.54□□□□□ -0.72
RDN18-1RDN18-1 YEL077CQ3E7X8 1277 aa10.54□□□□□ -0.72
RDN18-1RDN18-1 AI5_ALPHAQ9ZZX1 630 aa10.54□□□□□ -0.72
RDN18-1RDN18-1 TIF1P10081 395 aaKnown RBP10.53□□□□□ -0.72
RDN18-1RDN18-1 MRE11P32829 692 aa10.53□□□□□ -0.72
RDN18-1RDN18-1 COY1P34237 679 aa10.53□□□□□ -0.72
RDN18-1RDN18-1 YAP1801P38856 637 aa10.53□□□□□ -0.72
RDN18-1RDN18-1 YJR142WP47173 342 aa10.53□□□□□ -0.72
RDN18-1RDN18-1 NOP13P53883 403 aaKnown RBP RIP-Chip data10.53□□□□□ -0.72not detected
RDN18-1RDN18-1 ADI1Q03677 179 aa10.53□□□□□ -0.72
RDN18-1RDN18-1 TPK1P06244 397 aa10.52□□□□□ -0.73
RDN18-1RDN18-1 GID7P25569 745 aa10.52□□□□□ -0.73
RDN18-1RDN18-1 RPC19P28000 142 aaKnown RBP10.52□□□□□ -0.73
RDN18-1RDN18-1 GAC1P28006 793 aa10.52□□□□□ -0.73
RDN18-1RDN18-1 CYS3P31373 394 aaKnown RBP10.52□□□□□ -0.73
RDN18-1RDN18-1 UTR2P32623 467 aa10.52□□□□□ -0.73
RDN18-1RDN18-1 DRE2P36152 348 aa10.52□□□□□ -0.73
RDN18-1RDN18-1 RIM4P38741 713 aa10.52□□□□□ -0.73
RDN18-1RDN18-1 PRK1P40494 810 aa10.52□□□□□ -0.73
RDN18-1RDN18-1 AXL1P40851 1208 aa10.52□□□□□ -0.73
RDN18-1RDN18-1 VTC4P47075 721 aa10.52□□□□□ -0.73
RDN18-1RDN18-1 UBP2Q01476 1272 aa10.52□□□□□ -0.73
RDN18-1RDN18-1 YPL062WQ02781 134 aa10.52□□□□□ -0.73
RDN18-1RDN18-1 SND1Q04007 877 aa10.52□□□□□ -0.73
RDN18-1RDN18-1 RCL1Q08096 367 aaPredicted RBP10.52□□□□□ -0.73
RDN18-1RDN18-1 SPE4Q12455 300 aa10.52□□□□□ -0.73
RDN18-1RDN18-1 RTP1Q12751 981 aa10.52□□□□□ -0.73
RDN18-1RDN18-1 RSA4P25382 515 aaKnown RBP10.51□□□□□ -0.73
RDN18-1RDN18-1 DUR3P33413 735 aa10.51□□□□□ -0.73
RDN18-1RDN18-1 FZO1P38297 855 aa10.51□□□□□ -0.73
RDN18-1RDN18-1 AIM18P38884 321 aa10.51□□□□□ -0.73
RDN18-1RDN18-1 YDR089WP38966 869 aa10.51□□□□□ -0.73
RDN18-1RDN18-1 MND2P40577 368 aa10.51□□□□□ -0.73
RDN18-1RDN18-1 UBP6P43593 499 aaKnown RBP10.51□□□□□ -0.73
RDN18-1RDN18-1 ILM1P47155 203 aa10.51□□□□□ -0.73
RDN18-1RDN18-1 YGR127WP53275 312 aa10.51□□□□□ -0.73
RDN18-1RDN18-1 YPR003CP53394 754 aa10.51□□□□□ -0.73
RDN18-1RDN18-1 YNL134CP53912 376 aaKnown RBP10.51□□□□□ -0.73
RDN18-1RDN18-1 DNL4Q08387 944 aaPredicted RBP10.51□□□□□ -0.73
RDN18-1RDN18-1 CBC2Q08920 208 aaKnown RBP RIP-Chip data10.51□□□□□ -0.73not detected
RDN18-1RDN18-1 MRPL7P36519 292 aa10.51□□□□□ -0.73
RDN18-1RDN18-1 AFG3P39925 761 aa10.51□□□□□ -0.73
RDN18-1RDN18-1 PEP8P40335 379 aa10.51□□□□□ -0.73
RDN18-1RDN18-1 POL31P46957 487 aa10.51□□□□□ -0.73
RDN18-1RDN18-1 PCL10P53124 433 aa10.51□□□□□ -0.73
RDN18-1RDN18-1 YNL011CP53980 444 aa10.51□□□□□ -0.73
RDN18-1RDN18-1 STP1Q00947 519 aa10.51□□□□□ -0.73
RDN18-1RDN18-1 TIF35Q04067 274 aaKnown RBP10.51□□□□□ -0.73
RDN18-1RDN18-1 ICL2Q12031 575 aa10.51□□□□□ -0.73
RDN18-1RDN18-1 ERR1P0CX10 437 aa10.5□□□□□ -0.73
RDN18-1RDN18-1 ERR2P0CX11 437 aa10.5□□□□□ -0.73
RDN18-1RDN18-1 PWP1P21304 576 aaKnown RBP10.5□□□□□ -0.73
RDN18-1RDN18-1 NPP1P25353 742 aa10.5□□□□□ -0.73
RDN18-1RDN18-1 SSE1P32589 693 aaKnown RBP10.5□□□□□ -0.73
RDN18-1RDN18-1 KES1P35844 434 aaKnown RBP10.5□□□□□ -0.73
RDN18-1RDN18-1 TVP23P38962 199 aa10.5□□□□□ -0.73
RDN18-1RDN18-1 STL1P39932 569 aa10.5□□□□□ -0.73
RDN18-1RDN18-1 ERR3P42222 437 aa10.5□□□□□ -0.73
RDN18-1RDN18-1 AZR1P50080 613 aa10.5□□□□□ -0.73
RDN18-1RDN18-1 HST2P53686 357 aa10.5□□□□□ -0.73
RDN18-1RDN18-1 YSH1Q06224 779 aaPredicted RBP10.5□□□□□ -0.73
RDN18-1RDN18-1 STB3Q12427 513 aa10.5□□□□□ -0.73
RDN18-1RDN18-1 UBR2Q07963 1872 aa10.5□□□□□ -0.73
RDN18-1RDN18-1 PAB1P04147 577 aaKnown RBP RIP-Chip data10.49□□□□□ -0.73not detected
RDN18-1RDN18-1 URA10P30402 227 aa10.49□□□□□ -0.73
RDN18-1RDN18-1 CYM1P32898 989 aa10.49□□□□□ -0.73
RDN18-1RDN18-1 CSE2P33308 149 aa10.49□□□□□ -0.73
RDN18-1RDN18-1 RRN3P36070 627 aa10.49□□□□□ -0.73
RDN18-1RDN18-1 YHL026CP38740 315 aa10.49□□□□□ -0.73
RDN18-1RDN18-1 PPE1P38796 400 aa10.49□□□□□ -0.73
RDN18-1RDN18-1 YJL206CP39529 758 aa10.49□□□□□ -0.73
RDN18-1RDN18-1 GCV2P49095 1034 aa10.49□□□□□ -0.73
RDN18-1RDN18-1 RNR4P49723 345 aaKnown RBP10.49□□□□□ -0.73
RDN18-1RDN18-1 SLU7Q02775 382 aaKnown RBP10.49□□□□□ -0.73
RDN18-1RDN18-1 SKY1Q03656 742 aa10.49□□□□□ -0.73
Retrieved 100 of 5,963 RNA–protein pairs in 28.3 ms