RNA–Protein interactions for RNA: ENST00000461636.1

THUMPD3-207, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-207ENST00000461636 ADGRL1O94910 1474 aa8.45□□□□□ -1.06
THUMPD3-207ENST00000461636 FAM13AO94988 1023 aa8.44□□□□□ -1.06
THUMPD3-207ENST00000461636 SSFA2P28290 1259 aa8.44□□□□□ -1.06
THUMPD3-207ENST00000461636 PREPP48147 710 aa8.44□□□□□ -1.06
THUMPD3-207ENST00000461636 IKBKEQ14164 716 aa8.44□□□□□ -1.06
THUMPD3-207ENST00000461636 BEND4Q6ZU67 534 aa8.44□□□□□ -1.06
THUMPD3-207ENST00000461636 HHIPQ96QV1 700 aa8.44□□□□□ -1.06
THUMPD3-207ENST00000461636 FAM83CQ9BQN1 747 aa8.44□□□□□ -1.06
THUMPD3-207ENST00000461636 TRAIPQ9BWF2 469 aa8.44□□□□□ -1.06
THUMPD3-207ENST00000461636 KIAA1107Q9UPP5 1409 aa8.44□□□□□ -1.06
THUMPD3-207ENST00000461636 ARHGEF40Q8TER5 1519 aa8.44□□□□□ -1.06
THUMPD3-207ENST00000461636 TNFRSF21O75509 655 aa8.43□□□□□ -1.06
THUMPD3-207ENST00000461636 TRPA1O75762 1119 aa8.43□□□□□ -1.06
THUMPD3-207ENST00000461636 EFCAB2Q5VUJ9 269 aa8.43□□□□□ -1.06
THUMPD3-207ENST00000461636 ZKSCAN3Q9BRR0 538 aa8.43□□□□□ -1.06
THUMPD3-207ENST00000461636 CCNB3Q8WWL7 1395 aa8.43□□□□□ -1.06
THUMPD3-207ENST00000461636 MYOM3Q5VTT5 1437 aa8.43□□□□□ -1.06
THUMPD3-207ENST00000461636 SCAPERQ9BY12 1400 aa8.43□□□□□ -1.06
THUMPD3-207ENST00000461636 MBD5Q9P267 1494 aa8.43□□□□□ -1.06
THUMPD3-207ENST00000461636 SYCP2Q9BX26 1530 aa8.43□□□□□ -1.06
THUMPD3-207ENST00000461636 MEGF11A6BM72 1044 aa8.42□□□□□ -1.06
THUMPD3-207ENST00000461636 TMEM88BA6NKF7 163 aa8.42□□□□□ -1.06
THUMPD3-207ENST00000461636 EREGO14944 169 aa8.42□□□□□ -1.06
THUMPD3-207ENST00000461636 IRAK1P51617 712 aa8.42□□□□□ -1.06
THUMPD3-207ENST00000461636 SF3B2Q13435 895 aaKnown RBP8.42□□□□□ -1.06
THUMPD3-207ENST00000461636 MTMR3Q13615 1198 aa8.42□□□□□ -1.06
THUMPD3-207ENST00000461636 NXPE3Q969Y0 559 aa8.42□□□□□ -1.06
THUMPD3-207ENST00000461636 TRAPPC8Q9Y2L5 1435 aa8.42□□□□□ -1.06
THUMPD3-207ENST00000461636 ZNF518AQ6AHZ1 1483 aa8.42□□□□□ -1.06
THUMPD3-207ENST00000461636 MAGI2Q86UL8 1455 aa8.42□□□□□ -1.06
THUMPD3-207ENST00000461636 SIGLEC1Q9BZZ2 1709 aa8.42□□□□□ -1.06
THUMPD3-207ENST00000461636 KIDINS220Q9ULH0 1771 aa8.41□□□□□ -1.06
THUMPD3-207ENST00000461636 ARHGEF5Q12774 1597 aa8.41□□□□□ -1.06
THUMPD3-207ENST00000461636 INO80Q9ULG1 1556 aaPredicted RBP8.41□□□□□ -1.06
THUMPD3-207ENST00000461636 CAMSAP2Q08AD1 1489 aa8.41□□□□□ -1.06
THUMPD3-207ENST00000461636 TCOF1Q13428 1488 aaKnown RBP8.41□□□□□ -1.06
THUMPD3-207ENST00000461636 PLEKHH2Q8IVE3 1493 aa8.41□□□□□ -1.06
THUMPD3-207ENST00000461636 MIA2Q96PC5 1412 aa8.41□□□□□ -1.06
THUMPD3-207ENST00000461636 EIF4EBP3O60516 100 aaPredicted RBP8.41□□□□□ -1.06
THUMPD3-207ENST00000461636 NPR3P17342 541 aa8.41□□□□□ -1.06
THUMPD3-207ENST00000461636 NUTM2GQ5VZR2 741 aa8.41□□□□□ -1.06
THUMPD3-207ENST00000461636 USP26Q9BXU7 913 aa8.41□□□□□ -1.06
THUMPD3-207ENST00000461636 SOX17Q9H6I2 414 aaPredicted RBP8.41□□□□□ -1.06
THUMPD3-207ENST00000461636 HECW2Q9P2P5 1572 aa8.4□□□□□ -1.06
THUMPD3-207ENST00000461636 MLH3Q9UHC1 1453 aa8.4□□□□□ -1.06
THUMPD3-207ENST00000461636 RAPGEF3O95398 923 aa8.4□□□□□ -1.06
THUMPD3-207ENST00000461636 MED26O95402 600 aa8.4□□□□□ -1.06
THUMPD3-207ENST00000461636 GP2P55259 537 aaKnown RBP8.4□□□□□ -1.06
THUMPD3-207ENST00000461636 VN1R5Q7Z5H4 357 aa8.4□□□□□ -1.06
THUMPD3-207ENST00000461636 GIMAP7Q8NHV1 300 aa8.4□□□□□ -1.06
THUMPD3-207ENST00000461636 SHKBP1Q8TBC3 707 aa8.4□□□□□ -1.06
THUMPD3-207ENST00000461636 ASAP3Q8TDY4 903 aa8.4□□□□□ -1.06
THUMPD3-207ENST00000461636 BHLHE41Q9C0J9 482 aaPredicted RBP8.4□□□□□ -1.06
THUMPD3-207ENST00000461636 CYP4F12Q9HCS2 524 aa8.4□□□□□ -1.06
THUMPD3-207ENST00000461636 AMOTL2Q9Y2J4 779 aa8.4□□□□□ -1.06
THUMPD3-207ENST00000461636 ABCA6Q8N139 1617 aa8.4□□□□□ -1.07
THUMPD3-207ENST00000461636 REREQ9P2R6 1566 aa8.39□□□□□ -1.07
THUMPD3-207ENST00000461636 DIP2CQ9Y2E4 1556 aa8.39□□□□□ -1.07
THUMPD3-207ENST00000461636 ZNF644Q9H582 1327 aaPredicted RBP8.39□□□□□ -1.07
THUMPD3-207ENST00000461636 PAX4O43316 350 aa8.39□□□□□ -1.07
THUMPD3-207ENST00000461636 SPINK2P20155 84 aa8.39□□□□□ -1.07
THUMPD3-207ENST00000461636 FOXD3Q9UJU5 478 aaPredicted RBP8.39□□□□□ -1.07
THUMPD3-207ENST00000461636 ZFYVE16Q7Z3T8 1539 aa8.39□□□□□ -1.07
THUMPD3-207ENST00000461636 FGD6Q6ZV73 1430 aa8.38□□□□□ -1.07
THUMPD3-207ENST00000461636 YEATS2Q9ULM3 1422 aa8.38□□□□□ -1.07
THUMPD3-207ENST00000461636 CROCC2H7BZ55 1655 aa8.38□□□□□ -1.07
THUMPD3-207ENST00000461636 PRR19A6NJB7 356 aa8.38□□□□□ -1.07
THUMPD3-207ENST00000461636 SOX1O00570 391 aaPredicted RBP8.38□□□□□ -1.07
THUMPD3-207ENST00000461636 MAP4P27816 1152 aaKnown RBP8.38□□□□□ -1.07
THUMPD3-207ENST00000461636 C12orf50Q8NA57 414 aaPredicted RBP8.38□□□□□ -1.07
THUMPD3-207ENST00000461636 SUGCTQ9HAC7 445 aa8.38□□□□□ -1.07
THUMPD3-207ENST00000461636 CFDP1Q9UEE9 299 aaPredicted RBP8.38□□□□□ -1.07
THUMPD3-207ENST00000461636 PTPN23Q9H3S7 1636 aa8.38□□□□□ -1.07
THUMPD3-207ENST00000461636 PLXNC1O60486 1568 aa8.37□□□□□ -1.07
THUMPD3-207ENST00000461636 MAST1Q9Y2H9 1570 aa8.37□□□□□ -1.07
THUMPD3-207ENST00000461636 RXRBP28702 533 aa8.37□□□□□ -1.07
THUMPD3-207ENST00000461636 FKBP4Q02790 459 aaKnown RBP eCLIP8.37□□□□□ -1.07
THUMPD3-207ENST00000461636 HGSNATQ68CP4 663 aa8.37□□□□□ -1.07
THUMPD3-207ENST00000461636 DTX1Q86Y01 620 aa8.37□□□□□ -1.07
THUMPD3-207ENST00000461636 SMG8Q8ND04 991 aaKnown RBP8.37□□□□□ -1.07
THUMPD3-207ENST00000461636 KRTAP4-12Q9BQ66 201 aa8.37□□□□□ -1.07
THUMPD3-207ENST00000461636 TMPRSS13Q9BYE2 586 aa8.37□□□□□ -1.07
THUMPD3-207ENST00000461636 ATP7AQ04656 1500 aa8.36□□□□□ -1.07
THUMPD3-207ENST00000461636 LOC100289279A0A1B0GTE1 492 aa8.36□□□□□ -1.07
THUMPD3-207ENST00000461636 FZD6O60353 706 aa8.36□□□□□ -1.07
THUMPD3-207ENST00000461636 ABL1P00519 1130 aa8.36□□□□□ -1.07
THUMPD3-207ENST00000461636 AEBP1Q8IUX7 1158 aa8.36□□□□□ -1.07
THUMPD3-207ENST00000461636 GJD3Q8N144 294 aa8.36□□□□□ -1.07
THUMPD3-207ENST00000461636 AFAP1Q8N556 730 aa8.36□□□□□ -1.07
THUMPD3-207ENST00000461636 OAS3Q9Y6K5 1087 aaKnown RBP8.36□□□□□ -1.07
THUMPD3-207ENST00000461636 CCDC141Q6ZP82 1450 aa8.36□□□□□ -1.07
THUMPD3-207ENST00000461636 DNMT1P26358 1616 aaKnown RBP8.36□□□□□ -1.07
THUMPD3-207ENST00000461636 ADGBQ8N7X0 1667 aa8.35□□□□□ -1.07
THUMPD3-207ENST00000461636 SHANK2Q9UPX8 1470 aa8.35□□□□□ -1.07
THUMPD3-207ENST00000461636 WDR64B1ANS9 1081 aa8.35□□□□□ -1.07
THUMPD3-207ENST00000461636 ESRRAP11474 423 aaPredicted RBP8.35□□□□□ -1.07
THUMPD3-207ENST00000461636 CPSF6Q16630 551 aaKnown RBP eCLIP8.35□□□□□ -1.07
THUMPD3-207ENST00000461636 SGO2Q562F6 1265 aa8.35□□□□□ -1.07
THUMPD3-207ENST00000461636 MFSD14AQ96MC6 490 aa8.35□□□□□ -1.07
THUMPD3-207ENST00000461636 ATG3Q9NT62 314 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms