RNA–Protein interactions for RNA: ENSMUST00000068411.4

Ccdc88c-201, Transcript of Protein Daple, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc88c, Length 7,542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88c-201ENSMUST00000068411 Ccl1P10146 92 aa11.13□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Hspb7P35385 169 aa11.13□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 PtgfrP43117 366 aa11.13□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Ube2l3P68037 154 aaKnown RBP11.13□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Trav6-2Q5R1I4 113 aa11.13□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Megf9Q8BH27 600 aa11.13□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Rcc1lQ9CYF5 461 aa11.13□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 S1pr3Q9Z0U9 378 aa11.13□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 EomesO54839 707 aa11.13□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Ccl7Q03366 97 aa11.13□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 BckdhbQ6P3A8 390 aa11.13□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Cxcl3Q6W5C0 100 aa11.13□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 S1pr5Q91X56 400 aa11.13□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Vmn1r171Q9EPS6 316 aa11.13□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Ank1Q02357 1862 aa11.13□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Gm4175D3YTW8 314 aa11.13□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Defa35E9QLQ1 93 aa11.13□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 MdkP12025 140 aa11.13□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Defa9P50707 93 aa11.13□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Hist1h2baP70696 127 aa11.13□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Olfr147Q60886 317 aa11.13□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 GcsamQ6RFH4 181 aa11.13□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Olfr180Q7TS48 317 aa11.13□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Slc6a8Q8VBW1 640 aa11.13□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Cxcr6Q9EQ16 351 aa11.13□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Nubp1Q9R060 320 aa11.13□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Nup188Q6ZQH8 1759 aa11.12□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Esp3J3QN49 87 aa11.12□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Slc45a2P58355 530 aa11.12□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Gm21943Q5FWD5 227 aa11.12□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Plk3Q60806 631 aa11.12□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Ighv9-1A0A0B4J1P3 117 aa11.12□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Guca2aP33680 116 aa11.12□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Slc25a45Q8CFJ7 288 aa11.12□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 MrgprgQ91ZB5 289 aa11.12□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Vmn1r63Q9EPT1 300 aa11.12□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 1810011H11RikE9PVZ2 95 aa11.12□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Rnf165E9QAU8 347 aa11.12□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Defa30E9QPZ2 93 aa11.12□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Tcf21O35437 179 aa11.12□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Rplp1P47955 114 aa11.12□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Tff1Q08423 87 aa11.12□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Lclat1Q3UN02 376 aa11.12□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Prrg4Q8BGN6 226 aa11.12□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Tmem255aQ8BHW5 351 aa11.12□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Sfxn4Q925N1 313 aa11.12□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Cldn14Q9Z0S3 239 aa11.12□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Lgals1P16045 135 aaKnown RBP11.12□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Olfr324Q5NCC7 333 aa11.12□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Tff3Q62395 81 aa11.12□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Alkal2Q80UG6 151 aa11.12□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Prr11Q8BHE0 368 aa11.12□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Ociad1Q9CRD0 247 aaKnown RBP11.12□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Prss12O08762 761 aa11.12□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Mdh2P08249 338 aaKnown RBP11.12□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Cdx2P43241 311 aa11.12□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Rpl24Q8BP67 157 aaKnown RBP11.12□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Zfp942B8JJA7 486 aa11.12□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Smad7O35253 426 aa11.12□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 B4galt1P15535 399 aa11.12□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Olfr1537P34983 314 aa11.12□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Nkx6-3Q3UHX8 262 aa11.12□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Wfdc6aQ3UW55 136 aa11.12□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Kiss1rQ91V45 396 aa11.12□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Olfr154Q9QY00 318 aa11.12□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Ccl8Q9Z121 97 aa11.12□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Btaf1E9QAE3 1848 aa11.11□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Dll3O88516 592 aa11.11□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Gabra1P62812 455 aa11.11□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Klf4Q60793 483 aa11.11□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Asb13Q8VBX0 278 aa11.11□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Clec14aQ8VCP9 459 aa11.11□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Olfr493Q8VEW5 314 aa11.11□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Ighv1-43A0A0A6YXN5 117 aa11.11□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Olfr1282Q7TQY5 305 aa11.11□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Npc2Q9Z0J0 149 aa11.11□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Prss3Q792Z0 246 aaKnown RBP11.11□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Olfr924Q7TRB8 308 aa11.11□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Fbxw26Q8BI58 466 aa11.11□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Arrdc1Q99KN1 434 aa11.11□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Scgb1b12A0A087WP21 93 aa11.11□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Gm21746J3QMM6 180 aa11.11□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Pmp2P24526 132 aa11.11□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Lrrc52Q5M8M9 314 aa11.11□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Cd200r3Q5UKY4 296 aa11.11□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Tmprss3Q8K1T0 453 aa11.11□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Gm43720E0CXM8 267 aa11.11□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Lmx1bO88609 395 aa11.11□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Wnt5aP22725 380 aa11.11□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Bglap3P54615 95 aa11.11□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Rab42Q0PD08 215 aa11.11□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Acp7Q8BX37 438 aa11.11□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Ndfip1Q8R0W6 221 aa11.11□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Vmn1r202Q8R259 302 aa11.11□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Mfsd4b1Q8VCV9 425 aa11.11□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Wdr4Q9EP82 413 aa11.11□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Cpn1Q9JJN5 457 aa11.11□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Gm15440D3Z3P4 90 aa11.1□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Zfp1P08042 402 aa11.1□□□□□ -0.63
Ccdc88c-201ENSMUST00000068411 Tmem108Q8BHE4 574 aa11.1□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 132 ms