Protein–RNA interactions for Protein: Q6P3A8

Bckdhb, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdhbQ6P3A8 Gm25239-201ENSMUST00000174915 86 ntBASIC37.86■■■■□ 3.65
BckdhbQ6P3A8 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35.21■■■■□ 3.23
BckdhbQ6P3A8 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
BckdhbQ6P3A8 Gm24109-201ENSMUST00000175489 103 ntBASIC33.02■■■□□ 2.88
BckdhbQ6P3A8 Gm15042-201ENSMUST00000120212 883 ntBASIC32.7■■■□□ 2.83
BckdhbQ6P3A8 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.98■■■□□ 2.71
BckdhbQ6P3A8 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
BckdhbQ6P3A8 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
BckdhbQ6P3A8 Gm15045-201ENSMUST00000117359 883 ntBASIC31.87■■■□□ 2.69
BckdhbQ6P3A8 Gm23366-201ENSMUST00000175022 89 ntBASIC31.57■■■□□ 2.64
BckdhbQ6P3A8 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
BckdhbQ6P3A8 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.94■■■□□ 2.54
BckdhbQ6P3A8 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.66■■■□□ 2.5
BckdhbQ6P3A8 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.62■■■□□ 2.49
BckdhbQ6P3A8 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
BckdhbQ6P3A8 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
BckdhbQ6P3A8 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
BckdhbQ6P3A8 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.26■■■□□ 2.43
BckdhbQ6P3A8 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
BckdhbQ6P3A8 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
BckdhbQ6P3A8 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.06■■■□□ 2.4
BckdhbQ6P3A8 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
BckdhbQ6P3A8 Gm25238-201ENSMUST00000174914 89 ntBASIC30■■■□□ 2.39
BckdhbQ6P3A8 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
BckdhbQ6P3A8 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.63■■■□□ 2.33
BckdhbQ6P3A8 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
BckdhbQ6P3A8 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.39■■■□□ 2.3
BckdhbQ6P3A8 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
BckdhbQ6P3A8 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC29.29■■■□□ 2.28
BckdhbQ6P3A8 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
BckdhbQ6P3A8 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.25■■■□□ 2.27
BckdhbQ6P3A8 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.14■■■□□ 2.25
BckdhbQ6P3A8 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.08■■■□□ 2.25
BckdhbQ6P3A8 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
BckdhbQ6P3A8 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.01■■■□□ 2.23
BckdhbQ6P3A8 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29■■■□□ 2.23
BckdhbQ6P3A8 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.99■■■□□ 2.23
BckdhbQ6P3A8 Gm25262-201ENSMUST00000174934 133 ntBASIC28.96■■■□□ 2.23
BckdhbQ6P3A8 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
BckdhbQ6P3A8 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.78■■■□□ 2.2
BckdhbQ6P3A8 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.71■■■□□ 2.19
BckdhbQ6P3A8 Gm27325-201ENSMUST00000175467 74 ntBASIC28.56■■■□□ 2.16
BckdhbQ6P3A8 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.53■■■□□ 2.16
BckdhbQ6P3A8 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28.49■■■□□ 2.15
BckdhbQ6P3A8 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
BckdhbQ6P3A8 Gm26115-201ENSMUST00000175605 87 ntBASIC28.41■■■□□ 2.14
BckdhbQ6P3A8 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
BckdhbQ6P3A8 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28.39■■■□□ 2.13
BckdhbQ6P3A8 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC28.36■■■□□ 2.13
BckdhbQ6P3A8 Rab21-202ENSMUST00000218831 843 ntBASIC28.32■■■□□ 2.12
BckdhbQ6P3A8 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.3■■■□□ 2.12
BckdhbQ6P3A8 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
BckdhbQ6P3A8 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
BckdhbQ6P3A8 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
BckdhbQ6P3A8 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
BckdhbQ6P3A8 Gm8109-201ENSMUST00000194076 746 ntBASIC28.2■■■□□ 2.1
BckdhbQ6P3A8 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
BckdhbQ6P3A8 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
BckdhbQ6P3A8 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
BckdhbQ6P3A8 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.07■■■□□ 2.08
BckdhbQ6P3A8 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
BckdhbQ6P3A8 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27.94■■■□□ 2.06
BckdhbQ6P3A8 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.91■■■□□ 2.06
BckdhbQ6P3A8 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27.88■■■□□ 2.05
BckdhbQ6P3A8 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.78■■■□□ 2.04
BckdhbQ6P3A8 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
BckdhbQ6P3A8 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27.68■■■□□ 2.02
BckdhbQ6P3A8 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
BckdhbQ6P3A8 Psd-208ENSMUST00000224556 2034 ntBASIC27.58■■■□□ 2.01
BckdhbQ6P3A8 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
BckdhbQ6P3A8 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27.56■■■□□ 2
BckdhbQ6P3A8 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.55■■■□□ 2
BckdhbQ6P3A8 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27.53■■■□□ 2
BckdhbQ6P3A8 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
BckdhbQ6P3A8 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
BckdhbQ6P3A8 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC27.48■■□□□ 1.99
BckdhbQ6P3A8 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27.48■■□□□ 1.99
BckdhbQ6P3A8 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
BckdhbQ6P3A8 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.41■■□□□ 1.98
BckdhbQ6P3A8 Gm17082-201ENSMUST00000166043 1091 ntBASIC27.4■■□□□ 1.98
BckdhbQ6P3A8 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
BckdhbQ6P3A8 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27.33■■□□□ 1.97
BckdhbQ6P3A8 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
BckdhbQ6P3A8 Gm24804-201ENSMUST00000174982 85 ntBASIC27.23■■□□□ 1.95
BckdhbQ6P3A8 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27.2■■□□□ 1.94
BckdhbQ6P3A8 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27.2■■□□□ 1.94
BckdhbQ6P3A8 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
BckdhbQ6P3A8 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
BckdhbQ6P3A8 Gm27322-201ENSMUST00000184007 104 ntBASIC27.13■■□□□ 1.93
BckdhbQ6P3A8 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC27.12■■□□□ 1.93
BckdhbQ6P3A8 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
BckdhbQ6P3A8 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
BckdhbQ6P3A8 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC27.09■■□□□ 1.93
BckdhbQ6P3A8 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.02■■□□□ 1.92
BckdhbQ6P3A8 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC27.02■■□□□ 1.92
BckdhbQ6P3A8 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC27.02■■□□□ 1.92
BckdhbQ6P3A8 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
BckdhbQ6P3A8 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC27.01■■□□□ 1.91
BckdhbQ6P3A8 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
BckdhbQ6P3A8 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
Retrieved 100 of 76,532 protein–RNA pairs in 150.6 ms