RNA–Protein interactions for RNA: snR56

snR56, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR56, Length 88 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR56snR56 YIP4P53093 235 aa4.1□□□□□ -1.75
snR56snR56 COQ6P53318 479 aa4.1□□□□□ -1.75
snR56snR56 NUP53Q03790 475 aa4.1□□□□□ -1.75
snR56snR56 VBA4Q04602 768 aaKnown RBP4.1□□□□□ -1.75
snR56snR56 NSE3Q05541 303 aa4.1□□□□□ -1.75
snR56snR56 ATG33Q06485 197 aa4.1□□□□□ -1.75
snR56snR56 CDC53Q12018 815 aaKnown RBP4.1□□□□□ -1.75
snR56snR56 IMG2P25642 146 aaPredicted RBP4.09□□□□□ -1.75
snR56snR56 DSS1P39112 969 aa4.09□□□□□ -1.75
snR56snR56 EXO1P39875 702 aa4.09□□□□□ -1.75
snR56snR56 YJL043WP47053 257 aa4.09□□□□□ -1.75
snR56snR56 CRC1Q12289 327 aa4.09□□□□□ -1.75
snR56snR56 YMR084WA2P2R3 262 aa4.08□□□□□ -1.76
snR56snR56 HMG1P12683 1054 aa4.08□□□□□ -1.76
snR56snR56 STI1P15705 589 aaKnown RBP RIP-Chip data4.08□□□□□ -1.76not detected
snR56snR56 YAP1P19880 650 aaKnown RBP4.08□□□□□ -1.76
snR56snR56 CNE1P27825 502 aa4.08□□□□□ -1.76
snR56snR56 TMN3P40071 706 aa4.08□□□□□ -1.76
snR56snR56 BSP1Q06604 576 aa4.08□□□□□ -1.76
snR56snR56 URE2P23202 354 aaKnown RBP4.07□□□□□ -1.76
snR56snR56 GSY2P27472 705 aa4.07□□□□□ -1.76
snR56snR56 AIM14P53109 570 aa4.07□□□□□ -1.76
snR56snR56 COG8Q04632 607 aa4.07□□□□□ -1.76
snR56snR56 YDL073WQ07454 984 aa4.07□□□□□ -1.76
snR56snR56 YLR111WQ12528 110 aa4.07□□□□□ -1.76
snR56snR56 YPR089WO13585 888 aa4.06□□□□□ -1.76
snR56snR56 WHI2P12611 486 aa4.06□□□□□ -1.76
snR56snR56 NOP1P15646 327 aaKnown RBP4.06□□□□□ -1.76
snR56snR56 IME1P21190 360 aa4.06□□□□□ -1.76
snR56snR56 MRPL7P36519 292 aa4.06□□□□□ -1.76
snR56snR56 EFR3Q03653 782 aaKnown RBP4.06□□□□□ -1.76
snR56snR56 PRP22P24384 1145 aaKnown RBP4.05□□□□□ -1.76
snR56snR56 PCL2P25693 308 aa4.05□□□□□ -1.76
snR56snR56 PPE1P38796 400 aa4.05□□□□□ -1.76
snR56snR56 MFM1Q02783 413 aa4.05□□□□□ -1.76
snR56snR56 RDL1Q12305 139 aaKnown RBP4.05□□□□□ -1.76
snR56snR56 SEC3P33332 1336 aaKnown RBP4.04□□□□□ -1.76
snR56snR56 YKU70P32807 602 aa4.04□□□□□ -1.76
snR56snR56 PCM1P38628 557 aaKnown RBP4.04□□□□□ -1.76
snR56snR56 OPT1P40897 799 aa4.04□□□□□ -1.76
snR56snR56 YFL015CP43578 164 aa4.04□□□□□ -1.76
snR56snR56 FDC1Q03034 503 aa4.04□□□□□ -1.76
snR56snR56 CEF1Q03654 590 aaPredicted RBP4.04□□□□□ -1.76
snR56snR56 GIN4Q12263 1142 aa4.04□□□□□ -1.76
snR56snR56 HER1Q12276 1246 aa4.04□□□□□ -1.76
snR56snR56 YER190C-BP0CX94 160 aa4.03□□□□□ -1.76
snR56snR56 YEL077W-AP0CX95 160 aa4.03□□□□□ -1.76
snR56snR56 YGR296C-BP0CX96 160 aa4.03□□□□□ -1.76
snR56snR56 YPL283W-BP0CX97 160 aa4.03□□□□□ -1.76
snR56snR56 YPR204C-AP0CX98 160 aa4.03□□□□□ -1.76
snR56snR56 OAF1P39720 1047 aaPredicted RBP4.03□□□□□ -1.76
snR56snR56 BUD8P41698 603 aa4.03□□□□□ -1.76
snR56snR56 BUD17P53727 317 aa4.03□□□□□ -1.76
snR56snR56 YMR085WP0CF18 432 aa4.02□□□□□ -1.77
snR56snR56 MGM1P32266 881 aa4.02□□□□□ -1.77
snR56snR56 YAT2P40017 923 aa4.02□□□□□ -1.77
snR56snR56 YPS7Q06325 596 aa4.02□□□□□ -1.77
snR56snR56 YOR111WQ99210 232 aa4.02□□□□□ -1.77
snR56snR56 YPT1P01123 206 aaKnown RBP4.01□□□□□ -1.77
snR56snR56 TIM23P32897 222 aa4.01□□□□□ -1.77
snR56snR56 PXA1P41909 870 aa4.01□□□□□ -1.77
snR56snR56 YGR054WP53235 642 aaKnown RBP4.01□□□□□ -1.77
snR56snR56 SPO1P53541 631 aa4.01□□□□□ -1.77
snR56snR56 RPS15Q01855 142 aaKnown RBP4.01□□□□□ -1.77
snR56snR56 YMR210WQ03649 449 aa4.01□□□□□ -1.77
snR56snR56 MRPL1Q04599 285 aa4.01□□□□□ -1.77
snR56snR56 YLR407WQ06070 228 aa4.01□□□□□ -1.77
snR56snR56 SPN1Q06505 410 aaPredicted RBP4.01□□□□□ -1.77
snR56snR56 YPL216WQ08964 1102 aa4.01□□□□□ -1.77
snR56snR56 SSD1P24276 1250 aaKnown RBP RIP-Chip data4□□□□□ -1.77not detected
snR56snR56 YKR075CP36155 307 aa4□□□□□ -1.77
snR56snR56 MAL31P38156 614 aa4□□□□□ -1.77
snR56snR56 YMR124WP39523 943 aaKnown RBP4□□□□□ -1.77
snR56snR56 YIL024CP40543 189 aa4□□□□□ -1.77
snR56snR56 TIM50Q02776 476 aa4□□□□□ -1.77
snR56snR56 SRL1Q08673 210 aa4□□□□□ -1.77
snR56snR56 BUD7Q08754 746 aa4□□□□□ -1.77
snR56snR56 NDD1Q08887 554 aa4□□□□□ -1.77
snR56snR56 SFL1P20134 766 aa3.99□□□□□ -1.77
snR56snR56 RNR3P21672 869 aaKnown RBP3.99□□□□□ -1.77
snR56snR56 SRP40P32583 406 aaPredicted RBP3.99□□□□□ -1.77
snR56snR56 TDA10P42938 290 aa3.99□□□□□ -1.77
snR56snR56 YOR131CQ12486 218 aa3.99□□□□□ -1.77
snR56snR56 CRG1P38892 291 aaRIP-Chip data3.98□□□□□ -1.77not detected
snR56snR56 CFD1P40558 293 aa3.98□□□□□ -1.77
snR56snR56 SAE2P46946 345 aa3.98□□□□□ -1.77
snR56snR56 SAP4P53036 818 aa3.98□□□□□ -1.77
snR56snR56 GFD1Q04839 188 aaKnown RBP3.98□□□□□ -1.77
snR56snR56 YCP4P25349 247 aaKnown RBP3.97□□□□□ -1.77
snR56snR56 MSH2P25847 964 aa3.97□□□□□ -1.77
snR56snR56 PRE4P30657 266 aa3.97□□□□□ -1.77
snR56snR56 PEX6P33760 1030 aa3.97□□□□□ -1.77
snR56snR56 YPT10P38146 199 aa3.97□□□□□ -1.77
snR56snR56 CDS1P38221 457 aa3.97□□□□□ -1.77
snR56snR56 FTR1P40088 404 aa3.97□□□□□ -1.77
snR56snR56 UGO1Q03327 502 aa3.97□□□□□ -1.77
snR56snR56 HLR1Q04429 423 aa3.97□□□□□ -1.77
snR56snR56 STP4Q07351 490 aa3.97□□□□□ -1.77
snR56snR56 HOP1P20050 605 aa3.96□□□□□ -1.78
snR56snR56 ATO2P32907 282 aa3.96□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 8.8 ms