RNA–Protein interactions for RNA: YPL072W

UBP16, Transcript of Deubiquitinating enzyme anchored to the outer mitochondrial membrane, yeastyeast

Gene UBP16, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP16YPL072W YGL117WP53133 265 aa3.62□□□□□ -1.83
UBP16YPL072W NSE5Q03718 556 aa3.62□□□□□ -1.83
UBP16YPL072W ARG7Q04728 441 aa3.62□□□□□ -1.83
UBP16YPL072W THI73Q07904 523 aa3.62□□□□□ -1.83
UBP16YPL072W ICT1Q12385 394 aa3.62□□□□□ -1.83
UBP16YPL072W PGK1P00560 416 aaKnown RBP3.61□□□□□ -1.83
UBP16YPL072W SEC65P29478 273 aa3.61□□□□□ -1.83
UBP16YPL072W PRE4P30657 266 aa3.61□□□□□ -1.83
UBP16YPL072W TYS1P36421 394 aaKnown RBP3.61□□□□□ -1.83
UBP16YPL072W BRN1P38170 754 aa3.61□□□□□ -1.83
UBP16YPL072W HXT6P39003 570 aaKnown RBP3.61□□□□□ -1.83
UBP16YPL072W HXT7P39004 570 aa3.61□□□□□ -1.83
UBP16YPL072W TMN3P40071 706 aa3.61□□□□□ -1.83
UBP16YPL072W THI6P41835 540 aa3.61□□□□□ -1.83
UBP16YPL072W GZF3P42944 551 aaKnown RBP3.61□□□□□ -1.83
UBP16YPL072W BNA3P47039 444 aaKnown RBP3.61□□□□□ -1.83
UBP16YPL072W TAF4P50105 388 aa3.61□□□□□ -1.83
UBP16YPL072W CPR8P53728 308 aa3.61□□□□□ -1.83
UBP16YPL072W ECM9Q02202 377 aa3.61□□□□□ -1.83
UBP16YPL072W MTQ2Q03920 221 aaPredicted RBP3.61□□□□□ -1.83
UBP16YPL072W HLR1Q04429 423 aa3.61□□□□□ -1.83
UBP16YPL072W RPS21BQ3E754 87 aaKnown RBP3.61□□□□□ -1.83
UBP16YPL072W SSD1P24276 1250 aaKnown RBP RIP-Chip data3.6□□□□□ -1.83not detected
UBP16YPL072W DUN1P39009 513 aa3.6□□□□□ -1.83
UBP16YPL072W LTP1P40347 161 aa3.6□□□□□ -1.83
UBP16YPL072W CEF1Q03654 590 aaPredicted RBP3.6□□□□□ -1.83
UBP16YPL072W TMT1P32643 299 aa3.6□□□□□ -1.83
UBP16YPL072W OAF3P36023 863 aa3.6□□□□□ -1.83
UBP16YPL072W CRG1P38892 291 aaRIP-Chip data3.6□□□□□ -1.83not detected
UBP16YPL072W FTR1P40088 404 aa3.6□□□□□ -1.83
UBP16YPL072W TAX4P47030 604 aa3.6□□□□□ -1.83
UBP16YPL072W GLO1P50107 326 aa3.6□□□□□ -1.83
UBP16YPL072W TRS23Q03784 219 aa3.6□□□□□ -1.83
UBP16YPL072W HFI1Q12060 488 aa3.6□□□□□ -1.83
UBP16YPL072W APM4Q99186 491 aa3.6□□□□□ -1.83
UBP16YPL072W LEU2P04173 364 aaPredicted RBP3.59□□□□□ -1.84
UBP16YPL072W AAD3P25612 363 aa3.59□□□□□ -1.84
UBP16YPL072W MRPL7P36519 292 aa3.59□□□□□ -1.84
UBP16YPL072W CDS1P38221 457 aa3.59□□□□□ -1.84
UBP16YPL072W PIH1P38768 344 aa3.59□□□□□ -1.84
UBP16YPL072W PPE1P38796 400 aa3.59□□□□□ -1.84
UBP16YPL072W PMT3P47190 753 aa3.59□□□□□ -1.84
UBP16YPL072W YGR054WP53235 642 aaKnown RBP3.59□□□□□ -1.84
UBP16YPL072W EFR3Q03653 782 aaKnown RBP3.59□□□□□ -1.84
UBP16YPL072W YAP7Q08182 245 aa3.59□□□□□ -1.84
UBP16YPL072W YTM1Q12024 460 aaPredicted RBP3.59□□□□□ -1.84
UBP16YPL072W GLN4P13188 809 aaKnown RBP3.58□□□□□ -1.84
UBP16YPL072W TUP1P16649 713 aa3.58□□□□□ -1.84
UBP16YPL072W NUP1P20676 1076 aa3.58□□□□□ -1.84
UBP16YPL072W HOT13P36078 116 aa3.58□□□□□ -1.84
UBP16YPL072W DID4P36108 232 aa3.58□□□□□ -1.84
UBP16YPL072W PRM2P40534 656 aa3.58□□□□□ -1.84
UBP16YPL072W MNN11P46985 422 aaKnown RBP3.58□□□□□ -1.84
UBP16YPL072W YIP4P53093 235 aa3.58□□□□□ -1.84
UBP16YPL072W TIM50Q02776 476 aa3.58□□□□□ -1.84
UBP16YPL072W YHM2Q04013 314 aa3.58□□□□□ -1.84
UBP16YPL072W ZPS1Q12512 249 aa3.58□□□□□ -1.84
UBP16YPL072W ACO1P19414 778 aaKnown RBP RIP-Chip data3.57□□□□□ -1.84not detected
UBP16YPL072W PMA2P19657 947 aa3.57□□□□□ -1.84
UBP16YPL072W APN1P22936 367 aa3.57□□□□□ -1.84
UBP16YPL072W MBR1P23493 339 aa3.57□□□□□ -1.84
UBP16YPL072W PTP1P25044 335 aa3.57□□□□□ -1.84
UBP16YPL072W CNE1P27825 502 aa3.57□□□□□ -1.84
UBP16YPL072W FAT1P38225 669 aa3.57□□□□□ -1.84
UBP16YPL072W RIM4P38741 713 aa3.57□□□□□ -1.84
UBP16YPL072W OAF1P39720 1047 aaPredicted RBP3.57□□□□□ -1.84
UBP16YPL072W SEC5P89102 971 aa3.57□□□□□ -1.84
UBP16YPL072W PTA1Q01329 785 aaPredicted RBP3.57□□□□□ -1.84
UBP16YPL072W MFM1Q02783 413 aa3.57□□□□□ -1.84
UBP16YPL072W UME1Q03010 460 aa3.57□□□□□ -1.84
UBP16YPL072W AI5_ALPHAQ9ZZX1 630 aa3.57□□□□□ -1.84
UBP16YPL072W CDC26P14724 124 aa3.56□□□□□ -1.84
UBP16YPL072W MF(ALPHA)2P32435 120 aa3.56□□□□□ -1.84
UBP16YPL072W DHR2P36009 735 aaPredicted RBP3.56□□□□□ -1.84
UBP16YPL072W XBP1P40489 647 aa3.56□□□□□ -1.84
UBP16YPL072W ATG36P46983 293 aa3.56□□□□□ -1.84
UBP16YPL072W NET1P47035 1189 aa3.56□□□□□ -1.84
UBP16YPL072W PIP2P52960 996 aa3.56□□□□□ -1.84
UBP16YPL072W YNR029CP53729 429 aaKnown RBP3.56□□□□□ -1.84
UBP16YPL072W YDL073WQ07454 984 aa3.56□□□□□ -1.84
UBP16YPL072W CPA2P03965 1118 aaKnown RBP3.55□□□□□ -1.84
UBP16YPL072W RPS21AP0C0V8 87 aaKnown RBP3.55□□□□□ -1.84
UBP16YPL072W MTC7P32633 139 aa3.55□□□□□ -1.84
UBP16YPL072W YEL025CP39991 1188 aa3.55□□□□□ -1.84
UBP16YPL072W VID28P40547 921 aa3.55□□□□□ -1.84
UBP16YPL072W YJR142WP47173 342 aa3.55□□□□□ -1.84
UBP16YPL072W ENP2P48234 707 aaKnown RBP3.55□□□□□ -1.84
UBP16YPL072W GPG1P53130 126 aa3.55□□□□□ -1.84
UBP16YPL072W BUD17P53727 317 aa3.55□□□□□ -1.84
UBP16YPL072W YNL018CP53976 612 aa3.55□□□□□ -1.84
UBP16YPL072W DOS2P54858 310 aa3.55□□□□□ -1.84
UBP16YPL072W IOC4Q04213 475 aa3.55□□□□□ -1.84
UBP16YPL072W YPL216WQ08964 1102 aa3.55□□□□□ -1.84
UBP16YPL072W AIM41Q12032 185 aa3.55□□□□□ -1.84
UBP16YPL072W NUP145P49687 1317 aa3.55□□□□□ -1.84
UBP16YPL072W RPL7AP05737 244 aaKnown RBP3.54□□□□□ -1.84
UBP16YPL072W HOP1P20050 605 aa3.54□□□□□ -1.84
UBP16YPL072W YHR033WP38690 423 aa3.54□□□□□ -1.84
UBP16YPL072W COQ6P53318 479 aa3.54□□□□□ -1.84
UBP16YPL072W RPS15Q01855 142 aaKnown RBP3.54□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms