RNA–Protein interactions for RNA: YOR068C

VAM10, Transcript of Protein involved in vacuole morphogenesis, yeast

Gene VAM10, Length 345 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAM10	YOR068C	REC102	Q02721	264 aa		3.8	□□□□□ -1.8
VAM10	YOR068C	RCR2	Q03446	210 aa	Known RBP	3.8	□□□□□ -1.8
VAM10	YOR068C	SPC19	Q03954	165 aa		3.8	□□□□□ -1.8
VAM10	YOR068C	VTI1	Q04338	217 aa		3.8	□□□□□ -1.8
VAM10	YOR068C	RGC1	Q06108	1083 aa	Known RBP	3.8	□□□□□ -1.8
VAM10	YOR068C	YLR352W	Q06479	807 aa		3.8	□□□□□ -1.8
VAM10	YOR068C	PSR2	Q07949	397 aa		3.8	□□□□□ -1.8
VAM10	YOR068C	YLR040C	Q07988	224 aa		3.8	□□□□□ -1.8
VAM10	YOR068C	ATG11	Q12527	1178 aa		3.8	□□□□□ -1.8
VAM10	YOR068C	RTP1	Q12751	981 aa		3.8	□□□□□ -1.8
VAM10	YOR068C	ECM3	Q99252	613 aa		3.8	□□□□□ -1.8
VAM10	YOR068C	RPS17A	P02407	136 aa	Known RBP	3.79	□□□□□ -1.8
VAM10	YOR068C	GLN4	P13188	809 aa	Known RBP	3.79	□□□□□ -1.8
VAM10	YOR068C	RPS17B	P14127	136 aa	Known RBP	3.79	□□□□□ -1.8
VAM10	YOR068C	IME1	P21190	360 aa		3.79	□□□□□ -1.8
VAM10	YOR068C	CDC60	P26637	1090 aa	Known RBP	3.79	□□□□□ -1.8
VAM10	YOR068C	PMI40	P29952	429 aa	Known RBP	3.79	□□□□□ -1.8
VAM10	YOR068C	PEX5	P35056	612 aa		3.79	□□□□□ -1.8
VAM10	YOR068C	SEC9	P40357	651 aa		3.79	□□□□□ -1.8
VAM10	YOR068C	SRB7	P47822	140 aa		3.79	□□□□□ -1.8
VAM10	YOR068C	AMA1	P50082	593 aa		3.79	□□□□□ -1.8
VAM10	YOR068C	COX18	P53239	316 aa		3.79	□□□□□ -1.8
VAM10	YOR068C	KIN4	Q01919	800 aa		3.79	□□□□□ -1.8
VAM10	YOR068C	VTC3	Q02725	835 aa		3.79	□□□□□ -1.8
VAM10	YOR068C	YMR210W	Q03649	449 aa		3.79	□□□□□ -1.8
VAM10	YOR068C	VPS36	Q06696	566 aa		3.79	□□□□□ -1.8
VAM10	YOR068C	AIM39	Q08223	395 aa		3.79	□□□□□ -1.8
VAM10	YOR068C	SGO1	Q08490	590 aa		3.79	□□□□□ -1.8
VAM10	YOR068C	HOM3	P10869	527 aa		3.78	□□□□□ -1.8
VAM10	YOR068C	CDC26	P14724	124 aa		3.78	□□□□□ -1.8
VAM10	YOR068C	GFD2	P25370	566 aa	Known RBP	3.78	□□□□□ -1.8
VAM10	YOR068C	PET127	P32606	800 aa		3.78	□□□□□ -1.8
VAM10	YOR068C	TRM2	P33753	639 aa		3.78	□□□□□ -1.8
VAM10	YOR068C	YKL222C	P35995	705 aa		3.78	□□□□□ -1.8
VAM10	YOR068C	KTR4	P38131	464 aa		3.78	□□□□□ -1.8
VAM10	YOR068C	FMO1	P38866	432 aa		3.78	□□□□□ -1.8
VAM10	YOR068C	VID28	P40547	921 aa		3.78	□□□□□ -1.8
VAM10	YOR068C	YJL163C	P46996	555 aa		3.78	□□□□□ -1.8
VAM10	YOR068C	ATP22	P50273	684 aa	Predicted RBP	3.78	□□□□□ -1.8
VAM10	YOR068C	YNL058C	P53947	316 aa		3.78	□□□□□ -1.8
VAM10	YOR068C	TSR2	Q06672	205 aa	Known RBP	3.78	□□□□□ -1.8
VAM10	YOR068C	VIP1	Q06685	1146 aa	Known RBP	3.78	□□□□□ -1.8
VAM10	YOR068C	STP4	Q07351	490 aa		3.78	□□□□□ -1.8
VAM10	YOR068C	VHS3	Q08438	674 aa		3.78	□□□□□ -1.8
VAM10	YOR068C	IRC13	Q08630	104 aa		3.78	□□□□□ -1.8
VAM10	YOR068C	FRE5	Q08908	694 aa		3.78	□□□□□ -1.8
VAM10	YOR068C	NAT1	P12945	854 aa	Known RBP	3.77	□□□□□ -1.81
VAM10	YOR068C	FRS1	P15624	595 aa	Known RBP	3.77	□□□□□ -1.81
VAM10	YOR068C	ATP12	P22135	325 aa		3.77	□□□□□ -1.81
VAM10	YOR068C	KRR1	P25586	316 aa	Predicted RBP	3.77	□□□□□ -1.81
VAM10	YOR068C	VPH1	P32563	840 aa	Known RBP	3.77	□□□□□ -1.81
VAM10	YOR068C	YPT7	P32939	208 aa		3.77	□□□□□ -1.81
VAM10	YOR068C	SDS22	P36047	338 aa		3.77	□□□□□ -1.81
VAM10	YOR068C	RRN3	P36070	627 aa		3.77	□□□□□ -1.81
VAM10	YOR068C	RXT2	P38255	430 aa		3.77	□□□□□ -1.81
VAM10	YOR068C	BCD1	P38772	366 aa		3.77	□□□□□ -1.81
VAM10	YOR068C	APE4	P38821	490 aa		3.77	□□□□□ -1.81
VAM10	YOR068C	SAW1	P39735	261 aa		3.77	□□□□□ -1.81
VAM10	YOR068C	RSC8	P43609	557 aa	Known RBP	3.77	□□□□□ -1.81
VAM10	YOR068C	TCB2	P48231	1178 aa		3.77	□□□□□ -1.81
VAM10	YOR068C	ENP2	P48234	707 aa	Known RBP	3.77	□□□□□ -1.81
VAM10	YOR068C	ERO1	Q03103	563 aa		3.77	□□□□□ -1.81
VAM10	YOR068C	CTK1	Q03957	528 aa	Known RBP	3.77	□□□□□ -1.81
VAM10	YOR068C	ECM38	Q05902	660 aa	Predicted RBP	3.77	□□□□□ -1.81
VAM10	YOR068C	ADY4	Q05955	493 aa		3.77	□□□□□ -1.81
VAM10	YOR068C	THI22	Q06490	572 aa		3.77	□□□□□ -1.81
VAM10	YOR068C	RRP9	Q06506	573 aa	Known RBP	3.77	□□□□□ -1.81
VAM10	YOR068C	RRI2	Q12348	645 aa		3.77	□□□□□ -1.81
VAM10	YOR068C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	3.77	□□□□□ -1.81	not detected
VAM10	YOR068C	CHD1	P32657	1468 aa		3.76	□□□□□ -1.81
VAM10	YOR068C	PIF1	P07271	859 aa		3.76	□□□□□ -1.81
VAM10	YOR068C	ALG7	P07286	448 aa		3.76	□□□□□ -1.81
VAM10	YOR068C	PEX1	P24004	1043 aa		3.76	□□□□□ -1.81
VAM10	YOR068C	MSH1	P25846	959 aa		3.76	□□□□□ -1.81
VAM10	YOR068C	RPL5	P26321	297 aa	Known RBP	3.76	□□□□□ -1.81
VAM10	YOR068C	DGR2	P32330	852 aa		3.76	□□□□□ -1.81
VAM10	YOR068C	SSH4	P32343	579 aa		3.76	□□□□□ -1.81
VAM10	YOR068C	YKL100C	P34248	587 aa		3.76	□□□□□ -1.81
VAM10	YOR068C	SUL1	P38359	859 aa		3.76	□□□□□ -1.81
VAM10	YOR068C	YHL041W	P38730	149 aa		3.76	□□□□□ -1.81
VAM10	YOR068C	CCT3	P39077	534 aa	Known RBP	3.76	□□□□□ -1.81
VAM10	YOR068C	CAJ1	P39101	391 aa		3.76	□□□□□ -1.81
VAM10	YOR068C	NUP60	P39705	539 aa		3.76	□□□□□ -1.81
VAM10	YOR068C	BUD8	P41698	603 aa		3.76	□□□□□ -1.81
VAM10	YOR068C	UBC11	P52492	156 aa		3.76	□□□□□ -1.81
VAM10	YOR068C	VPS4	P52917	437 aa		3.76	□□□□□ -1.81
VAM10	YOR068C	BTN2	P53286	410 aa		3.76	□□□□□ -1.81
VAM10	YOR068C	SUN4	P53616	420 aa		3.76	□□□□□ -1.81
VAM10	YOR068C	CNM67	P53865	581 aa	Known RBP	3.76	□□□□□ -1.81
VAM10	YOR068C	RNT1	Q02555	471 aa		3.76	□□□□□ -1.81
VAM10	YOR068C	YMR111C	Q04461	462 aa	Predicted RBP	3.76	□□□□□ -1.81
VAM10	YOR068C	IRC3	Q06683	689 aa		3.76	□□□□□ -1.81
VAM10	YOR068C	YOL073C	Q08232	322 aa		3.76	□□□□□ -1.81
VAM10	YOR068C	YRM1	Q12340	786 aa		3.76	□□□□□ -1.81
VAM10	YOR068C	PPR1	P07272	904 aa	Predicted RBP	3.75	□□□□□ -1.81
VAM10	YOR068C	ERG20	P08524	352 aa	Known RBP	3.75	□□□□□ -1.81
VAM10	YOR068C	MVD1	P32377	396 aa	Known RBP	3.75	□□□□□ -1.81
VAM10	YOR068C	HXT4	P32467	576 aa		3.75	□□□□□ -1.81
VAM10	YOR068C	YKL050C	P35736	922 aa		3.75	□□□□□ -1.81
VAM10	YOR068C	PIM1	P36775	1133 aa		3.75	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 12 ms