RNA–Protein interactions for RNA: YNL293W

MSB3, Transcript of Rab GTPase-activating protein, yeast

Gene MSB3, Length 1,902 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB3	YNL293W	RPS17A	P02407	136 aa	Known RBP	7.36	□□□□□ -1.23
MSB3	YNL293W	YGL041W-A	P0C5N3	154 aa		7.36	□□□□□ -1.23
MSB3	YNL293W	HOM3	P10869	527 aa		7.36	□□□□□ -1.23
MSB3	YNL293W	PYC1	P11154	1178 aa	Known RBP	7.36	□□□□□ -1.23
MSB3	YNL293W	RPS17B	P14127	136 aa	Known RBP	7.36	□□□□□ -1.23
MSB3	YNL293W	STF2	P16965	84 aa		7.36	□□□□□ -1.23
MSB3	YNL293W	ACE2	P21192	770 aa		7.36	□□□□□ -1.23
MSB3	YNL293W	PFF1	P38244	976 aa		7.36	□□□□□ -1.23
MSB3	YNL293W	HAL5	P38970	855 aa	Known RBP	7.36	□□□□□ -1.23
MSB3	YNL293W	CCT2	P39076	527 aa	Known RBP	7.36	□□□□□ -1.23
MSB3	YNL293W	YJR061W	P40355	935 aa		7.36	□□□□□ -1.23
MSB3	YNL293W	YJL181W	P46987	611 aa		7.36	□□□□□ -1.23
MSB3	YNL293W	FMP33	P46998	180 aa		7.36	□□□□□ -1.23
MSB3	YNL293W	OKP1	P53298	406 aa		7.36	□□□□□ -1.23
MSB3	YNL293W	CNM67	P53865	581 aa	Known RBP	7.36	□□□□□ -1.23
MSB3	YNL293W	HAS1	Q03532	505 aa	Known RBP	7.36	□□□□□ -1.23
MSB3	YNL293W	ARX1	Q03862	593 aa	Known RBP	7.36	□□□□□ -1.23
MSB3	YNL293W	YDL114W	Q07530	308 aa		7.36	□□□□□ -1.23
MSB3	YNL293W	YPL150W	Q12152	901 aa		7.36	□□□□□ -1.23
MSB3	YNL293W	CMC2	Q3E7A4	109 aa		7.36	□□□□□ -1.23
MSB3	YNL293W	RPO21	P04050	1733 aa	Known RBP	7.36	□□□□□ -1.23
MSB3	YNL293W	CHO2	P05374	869 aa	Known RBP	7.35	□□□□□ -1.23
MSB3	YNL293W	MRPL33	P20084	86 aa		7.35	□□□□□ -1.23
MSB3	YNL293W	DBP5	P20449	482 aa	Known RBP	7.35	□□□□□ -1.23
MSB3	YNL293W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	7.35	□□□□□ -1.23	not detected
MSB3	YNL293W	GTT3	P39996	337 aa		7.35	□□□□□ -1.23
MSB3	YNL293W	JEM1	P40358	645 aa		7.35	□□□□□ -1.23
MSB3	YNL293W	ALA1	P40825	983 aa	Known RBP	7.35	□□□□□ -1.23
MSB3	YNL293W	ROK1	P45818	564 aa	Predicted RBP	7.35	□□□□□ -1.23
MSB3	YNL293W	ENT3	P47160	408 aa		7.35	□□□□□ -1.23
MSB3	YNL293W	IMP4	P53941	290 aa	Known RBP	7.35	□□□□□ -1.23
MSB3	YNL293W	YMR010W	Q03687	405 aa		7.35	□□□□□ -1.23
MSB3	YNL293W	MED2	Q12124	431 aa		7.35	□□□□□ -1.23
MSB3	YNL293W	GLN4	P13188	809 aa	Known RBP	7.35	□□□□□ -1.23
MSB3	YNL293W	YAK1	P14680	807 aa		7.35	□□□□□ -1.23
MSB3	YNL293W	PGS1	P25578	521 aa		7.35	□□□□□ -1.23
MSB3	YNL293W	COQ8	P27697	501 aa		7.35	□□□□□ -1.23
MSB3	YNL293W	YKT6	P36015	200 aa	Known RBP	7.35	□□□□□ -1.23
MSB3	YNL293W	YKR078W	P36158	585 aa	Known RBP	7.35	□□□□□ -1.23
MSB3	YNL293W	RDH54	P38086	958 aa		7.35	□□□□□ -1.23
MSB3	YNL293W	CCZ1	P38273	704 aa		7.35	□□□□□ -1.23
MSB3	YNL293W	NOP16	P40007	231 aa	Known RBP	7.35	□□□□□ -1.23
MSB3	YNL293W	ALG5	P40350	334 aa		7.35	□□□□□ -1.23
MSB3	YNL293W	MPS1	P54199	764 aa		7.35	□□□□□ -1.23
MSB3	YNL293W	YPD1	Q07688	167 aa		7.35	□□□□□ -1.23
MSB3	YNL293W	GRC3	Q07845	632 aa		7.35	□□□□□ -1.23
MSB3	YNL293W	NCA2	Q12374	616 aa		7.35	□□□□□ -1.23
MSB3	YNL293W	ARG81	P05085	880 aa		7.34	□□□□□ -1.23
MSB3	YNL293W	KAR2	P16474	682 aa	Known RBP	7.34	□□□□□ -1.23
MSB3	YNL293W	SEC65	P29478	273 aa		7.34	□□□□□ -1.23
MSB3	YNL293W	MLS1	P30952	554 aa		7.34	□□□□□ -1.23
MSB3	YNL293W	VMA6	P32366	345 aa	Known RBP	7.34	□□□□□ -1.23
MSB3	YNL293W	SRB4	P32569	687 aa		7.34	□□□□□ -1.23
MSB3	YNL293W	DOA4	P32571	926 aa		7.34	□□□□□ -1.23
MSB3	YNL293W	MRS6	P32864	603 aa	Known RBP	7.34	□□□□□ -1.23
MSB3	YNL293W	PMT1	P33775	817 aa		7.34	□□□□□ -1.23
MSB3	YNL293W	YPT52	P36018	234 aa	Known RBP	7.34	□□□□□ -1.23
MSB3	YNL293W	POP7	P38291	140 aa		7.34	□□□□□ -1.23
MSB3	YNL293W	MSS4	P38994	779 aa		7.34	□□□□□ -1.23
MSB3	YNL293W	ELP2	P42935	788 aa		7.34	□□□□□ -1.23
MSB3	YNL293W	NIT3	P49954	291 aa		7.34	□□□□□ -1.23
MSB3	YNL293W	NAS6	P50086	228 aa		7.34	□□□□□ -1.23
MSB3	YNL293W	PSP1	P50896	841 aa	Known RBP	7.34	□□□□□ -1.23
MSB3	YNL293W	MET13	P53128	600 aa		7.34	□□□□□ -1.23
MSB3	YNL293W	YNL193W	P53870	558 aa		7.34	□□□□□ -1.23
MSB3	YNL293W	SIW14	P53965	281 aa		7.34	□□□□□ -1.23
MSB3	YNL293W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	7.34	□□□□□ -1.23	not detected
MSB3	YNL293W	NGL3	Q03210	505 aa		7.34	□□□□□ -1.23
MSB3	YNL293W	NSE5	Q03718	556 aa		7.34	□□□□□ -1.23
MSB3	YNL293W	SPC2	Q04969	178 aa		7.34	□□□□□ -1.23
MSB3	YNL293W	TRE1	Q08919	783 aa		7.34	□□□□□ -1.23
MSB3	YNL293W	ELG1	Q12050	791 aa		7.34	□□□□□ -1.23
MSB3	YNL293W	MAM3	Q12296	706 aa		7.34	□□□□□ -1.23
MSB3	YNL293W	MDM20	Q12387	796 aa	Known RBP	7.34	□□□□□ -1.23
MSB3	YNL293W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	7.33	□□□□□ -1.24	not detected
MSB3	YNL293W	CLN2	P20438	545 aa		7.33	□□□□□ -1.24
MSB3	YNL293W	CWH43	P25618	953 aa		7.33	□□□□□ -1.24
MSB3	YNL293W	BCK2	P33306	851 aa		7.33	□□□□□ -1.24
MSB3	YNL293W	KTR2	P33550	425 aa		7.33	□□□□□ -1.24
MSB3	YNL293W	BSD2	P38356	321 aa		7.33	□□□□□ -1.24
MSB3	YNL293W	BOL3	P39724	118 aa		7.33	□□□□□ -1.24
MSB3	YNL293W	RET2	P43621	546 aa		7.33	□□□□□ -1.24
MSB3	YNL293W	LSM1	P47017	172 aa	Known RBP	7.33	□□□□□ -1.24
MSB3	YNL293W	MAD3	P47074	515 aa		7.33	□□□□□ -1.24
MSB3	YNL293W	RMR1	P53060	241 aa		7.33	□□□□□ -1.24
MSB3	YNL293W	RSC4	Q02206	625 aa		7.33	□□□□□ -1.24
MSB3	YNL293W	LGE1	Q02796	332 aa	Known RBP	7.33	□□□□□ -1.24
MSB3	YNL293W	HMO1	Q03973	246 aa	Known RBP	7.33	□□□□□ -1.24
MSB3	YNL293W	YLR001C	Q07895	862 aa		7.33	□□□□□ -1.24
MSB3	YNL293W	SAM3	Q08986	587 aa		7.33	□□□□□ -1.24
MSB3	YNL293W	NSI1	Q12457	570 aa		7.33	□□□□□ -1.24
MSB3	YNL293W	APM4	Q99186	491 aa		7.33	□□□□□ -1.24
MSB3	YNL293W	DOP1	Q03921	1698 aa		7.33	□□□□□ -1.24
MSB3	YNL293W	ATP6	P00854	259 aa		7.33	□□□□□ -1.24
MSB3	YNL293W	CDC24	P11433	854 aa	Predicted RBP	7.33	□□□□□ -1.24
MSB3	YNL293W	ASF2	P32448	525 aa	Predicted RBP	7.33	□□□□□ -1.24
MSB3	YNL293W	RPT5	P33297	434 aa	Known RBP	7.33	□□□□□ -1.24
MSB3	YNL293W	CLG1	P35190	452 aa		7.33	□□□□□ -1.24
MSB3	YNL293W	APM3	P38153	483 aa		7.33	□□□□□ -1.24
MSB3	YNL293W	YAP3	P38749	330 aa		7.33	□□□□□ -1.24

Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms