RNA–Protein interactions for RNA: YML046W

PRP39, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP39, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP39YML046W CIT1P00890 479 aa1.9□□□□□ -2.11
PRP39YML046W YKR051WP36142 418 aa1.9□□□□□ -2.11
PRP39YML046W MTG2P38860 518 aa1.9□□□□□ -2.11
PRP39YML046W RPN10P38886 268 aaKnown RBP1.9□□□□□ -2.11
PRP39YML046W SET2P46995 733 aaKnown RBP1.9□□□□□ -2.11
PRP39YML046W GRX1P25373 110 aaKnown RBP1.89□□□□□ -2.11
PRP39YML046W EXO1P39875 702 aa1.89□□□□□ -2.11
PRP39YML046W YIR016WP40572 265 aa1.89□□□□□ -2.11
PRP39YML046W MDV1P47025 714 aa1.89□□□□□ -2.11
PRP39YML046W COP1P53622 1201 aaKnown RBP1.89□□□□□ -2.11
PRP39YML046W YML020WQ03722 664 aa1.89□□□□□ -2.11
PRP39YML046W TPO3Q06451 622 aa1.89□□□□□ -2.11
PRP39YML046W YDL073WQ07454 984 aa1.89□□□□□ -2.11
PRP39YML046W SRP40P32583 406 aaPredicted RBP1.88□□□□□ -2.11
PRP39YML046W YKR018CP36114 725 aa1.88□□□□□ -2.11
PRP39YML046W YIP4P53093 235 aa1.88□□□□□ -2.11
PRP39YML046W BOP3P53958 396 aa1.88□□□□□ -2.11
PRP39YML046W YNL018CP53976 612 aa1.88□□□□□ -2.11
PRP39YML046W RPL15BP54780 204 aaPredicted RBP1.88□□□□□ -2.11
PRP39YML046W LEE1Q02799 301 aaKnown RBP1.88□□□□□ -2.11
PRP39YML046W SMA2Q04658 369 aa1.88□□□□□ -2.11
PRP39YML046W WHI2P12611 486 aa1.88□□□□□ -2.11
PRP39YML046W KIN82P25341 720 aa1.88□□□□□ -2.11
PRP39YML046W BET3P36149 193 aa1.88□□□□□ -2.11
PRP39YML046W ARP4P80428 489 aa1.88□□□□□ -2.11
PRP39YML046W PUF2Q12221 1075 aaKnown RBP RIP-Chip data1.88□□□□□ -2.11not detected
PRP39YML046W YPT1P01123 206 aaKnown RBP1.87□□□□□ -2.11
PRP39YML046W RPS9BP05755 195 aaKnown RBP1.87□□□□□ -2.11
PRP39YML046W FMP46P36141 133 aaKnown RBP1.87□□□□□ -2.11
PRP39YML046W SKP2P42843 763 aa1.87□□□□□ -2.11
PRP39YML046W YGR125WP53273 1036 aa1.87□□□□□ -2.11
PRP39YML046W YPL071CQ02864 156 aa1.87□□□□□ -2.11
PRP39YML046W SPN1Q06505 410 aaPredicted RBP1.87□□□□□ -2.11
PRP39YML046W AIM17P23180 465 aaKnown RBP1.86□□□□□ -2.11
PRP39YML046W YCR043CP25361 127 aa1.86□□□□□ -2.11
PRP39YML046W MCD4P36051 919 aa1.86□□□□□ -2.11
PRP39YML046W MFM1Q02783 413 aa1.86□□□□□ -2.11
PRP39YML046W ISA1Q07821 250 aaPredicted RBP1.86□□□□□ -2.11
PRP39YML046W NOP8Q08287 484 aaPredicted RBP1.86□□□□□ -2.11
PRP39YML046W YFL015CP43578 164 aa1.86□□□□□ -2.11
PRP39YML046W BIT61P47041 543 aa1.86□□□□□ -2.11
PRP39YML046W GFD1Q04839 188 aaKnown RBP1.86□□□□□ -2.11
PRP39YML046W YMR317WQ04893 1140 aa1.86□□□□□ -2.11
PRP39YML046W DSE3Q08729 430 aa1.86□□□□□ -2.11
PRP39YML046W MTC2P34246 357 aa1.85□□□□□ -2.11
PRP39YML046W YIL152WP40455 235 aa1.85□□□□□ -2.11
PRP39YML046W YPL216WQ08964 1102 aa1.85□□□□□ -2.11
PRP39YML046W UBX3Q12229 455 aa1.85□□□□□ -2.11
PRP39YML046W YPR117WQ06116 2489 aa1.85□□□□□ -2.11
PRP39YML046W RAD4P14736 754 aa1.84□□□□□ -2.11
PRP39YML046W CNE1P27825 502 aa1.84□□□□□ -2.11
PRP39YML046W GND1P38720 489 aaKnown RBP1.84□□□□□ -2.11
PRP39YML046W TES1P41903 349 aaKnown RBP1.84□□□□□ -2.11
PRP39YML046W IRC7P43623 340 aa1.84□□□□□ -2.11
PRP39YML046W YMR230W-AQ3E7B5 62 aa1.84□□□□□ -2.11
PRP39YML046W CIT2P08679 460 aa1.84□□□□□ -2.12
PRP39YML046W YIL092WP40497 633 aa1.84□□□□□ -2.12
PRP39YML046W BRE5P53741 515 aaKnown RBP1.84□□□□□ -2.12
PRP39YML046W COQ3P27680 312 aa1.83□□□□□ -2.12
PRP39YML046W STO1P34160 861 aaKnown RBP1.83□□□□□ -2.12
PRP39YML046W EXO84P38261 753 aa1.83□□□□□ -2.12
PRP39YML046W PPE1P38796 400 aa1.83□□□□□ -2.12
PRP39YML046W BUD17P53727 317 aa1.83□□□□□ -2.12
PRP39YML046W SNP1Q00916 300 aaPredicted RBP1.83□□□□□ -2.12
PRP39YML046W CEF1Q03654 590 aaPredicted RBP1.83□□□□□ -2.12
PRP39YML046W VBA4Q04602 768 aaKnown RBP1.83□□□□□ -2.12
PRP39YML046W MIH1P23748 554 aa1.82□□□□□ -2.12
PRP39YML046W SSD1P24276 1250 aaKnown RBP RIP-Chip data1.82□□□□□ -2.12not detected
PRP39YML046W YPT7P32939 208 aa1.82□□□□□ -2.12
PRP39YML046W DHH1P39517 506 aaKnown RBP1.82□□□□□ -2.12
PRP39YML046W RTA1P53047 317 aa1.82□□□□□ -2.12
PRP39YML046W WRS1Q12109 432 aaKnown RBP1.82□□□□□ -2.12
PRP39YML046W SSF2Q12153 453 aaPredicted RBP1.82□□□□□ -2.12
PRP39YML046W RNR3P21672 869 aaKnown RBP1.82□□□□□ -2.12
PRP39YML046W RPT3P33298 428 aaKnown RBP1.82□□□□□ -2.12
PRP39YML046W FAA2P39518 744 aa1.82□□□□□ -2.12
PRP39YML046W TMN3P40071 706 aa1.82□□□□□ -2.12
PRP39YML046W VRG4P40107 337 aa1.82□□□□□ -2.12
PRP39YML046W TDA10P42938 290 aa1.82□□□□□ -2.12
PRP39YML046W SAE2P46946 345 aa1.82□□□□□ -2.12
PRP39YML046W ZAP1P47043 880 aa1.82□□□□□ -2.12
PRP39YML046W TIM54P47045 478 aa1.82□□□□□ -2.12
PRP39YML046W FCP1Q03254 732 aa1.82□□□□□ -2.12
PRP39YML046W VHS3Q08438 674 aa1.82□□□□□ -2.12
PRP39YML046W BI2P03873 423 aa1.81□□□□□ -2.12
PRP39YML046W FRS1P15624 595 aaKnown RBP1.81□□□□□ -2.12
PRP39YML046W ACO1P19414 778 aaKnown RBP RIP-Chip data1.81□□□□□ -2.12not detected
PRP39YML046W PET127P32606 800 aa1.81□□□□□ -2.12
PRP39YML046W LOT5P34234 306 aa1.81□□□□□ -2.12
PRP39YML046W EFR3Q03653 782 aaKnown RBP1.81□□□□□ -2.12
PRP39YML046W NHX1Q04121 633 aa1.81□□□□□ -2.12
PRP39YML046W ATX2Q12067 313 aa1.81□□□□□ -2.12
PRP39YML046W SSZ1P38788 538 aaKnown RBP1.8□□□□□ -2.12
PRP39YML046W YHR202WP38887 602 aa1.8□□□□□ -2.12
PRP39YML046W YIL169CP40442 995 aa1.8□□□□□ -2.12
PRP39YML046W SAD1P43589 448 aa1.8□□□□□ -2.12
PRP39YML046W YMR034CQ05131 434 aaPredicted RBP1.8□□□□□ -2.12
PRP39YML046W TGS1Q12052 315 aa1.8□□□□□ -2.12
PRP39YML046W PRP22P24384 1145 aaKnown RBP1.8□□□□□ -2.12
PRP39YML046W HOS2P53096 452 aaPredicted RBP1.8□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 48.4 ms