RNA–Protein interactions for RNA: YLR277C

YSH1, Transcript of Putative endoribonuclease, yeast

Gene YSH1, Length 2,340 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YSH1	YLR277C	TFB2	Q02939	513 aa		4.26	□□□□□ -1.73
YSH1	YLR277C	GSF2	Q04697	403 aa	Known RBP	4.26	□□□□□ -1.73
YSH1	YLR277C	DXO1	Q06349	442 aa		4.26	□□□□□ -1.73
YSH1	YLR277C	YFT2	Q06676	274 aa		4.26	□□□□□ -1.73
YSH1	YLR277C	SIL1	Q08199	421 aa		4.26	□□□□□ -1.73
YSH1	YLR277C	DAS2	Q12084	232 aa		4.26	□□□□□ -1.73
YSH1	YLR277C	SKM1	Q12469	655 aa		4.26	□□□□□ -1.73
YSH1	YLR277C	TY2B-LR1	P0C2J3	1770 aa		4.26	□□□□□ -1.73
YSH1	YLR277C	TY2B-F	P0CX63	1770 aa		4.26	□□□□□ -1.73
YSH1	YLR277C	TY2B-GR2	P0CX64	1770 aa		4.26	□□□□□ -1.73
YSH1	YLR277C	TY2B-C	P25384	1770 aa		4.26	□□□□□ -1.73
YSH1	YLR277C	TY2B-DR2	Q03494	1770 aa		4.26	□□□□□ -1.73
YSH1	YLR277C	TY1B-DR1	Q03855	1755 aa		4.26	□□□□□ -1.73
YSH1	YLR277C	TY2B-DR3	Q07791	1770 aa	Known RBP	4.26	□□□□□ -1.73
YSH1	YLR277C	TY2B-OR1	Q12113	1770 aa		4.26	□□□□□ -1.73
YSH1	YLR277C	TY2B-DR1	Q12472	1770 aa		4.26	□□□□□ -1.73
YSH1	YLR277C	TY2B-B	Q12491	1770 aa		4.26	□□□□□ -1.73
YSH1	YLR277C	TY2B-OR2	Q12501	1770 aa		4.26	□□□□□ -1.73
YSH1	YLR277C	TY1B-DR3	Q99231	1755 aa		4.26	□□□□□ -1.73
YSH1	YLR277C	MET3	P08536	511 aa		4.26	□□□□□ -1.73
YSH1	YLR277C	RAP1	P11938	827 aa		4.26	□□□□□ -1.73
YSH1	YLR277C	IDI1	P15496	288 aa		4.26	□□□□□ -1.73
YSH1	YLR277C	TYR1	P20049	452 aa		4.26	□□□□□ -1.73
YSH1	YLR277C	OSM1	P21375	501 aa	Known RBP	4.26	□□□□□ -1.73
YSH1	YLR277C	NAM9	P27929	486 aa		4.26	□□□□□ -1.73
YSH1	YLR277C	MDJ1	P35191	511 aa		4.26	□□□□□ -1.73
YSH1	YLR277C	NUP133	P36161	1157 aa		4.26	□□□□□ -1.73
YSH1	YLR277C	PBY1	P38254	753 aa		4.26	□□□□□ -1.73
YSH1	YLR277C	BMT2	P38278	337 aa		4.26	□□□□□ -1.73
YSH1	YLR277C	TDP1	P38319	544 aa		4.26	□□□□□ -1.73
YSH1	YLR277C	RGD1	P38339	666 aa		4.26	□□□□□ -1.73
YSH1	YLR277C	CRP1	P38845	465 aa	Known RBP	4.26	□□□□□ -1.73
YSH1	YLR277C	FRT2	P39734	528 aa		4.26	□□□□□ -1.73
YSH1	YLR277C	TIF4631	P39935	952 aa	Known RBP	4.26	□□□□□ -1.73
YSH1	YLR277C	FIG4	P42837	879 aa		4.26	□□□□□ -1.73
YSH1	YLR277C	DUG1	P43616	481 aa	Known RBP	4.26	□□□□□ -1.73
YSH1	YLR277C	YJR039W	P47107	1121 aa		4.26	□□□□□ -1.73
YSH1	YLR277C	YML6	P51998	286 aa		4.26	□□□□□ -1.73
YSH1	YLR277C	MNT4	P53745	580 aa		4.26	□□□□□ -1.73
YSH1	YLR277C	MSC6	Q08818	692 aa	Known RBP	4.26	□□□□□ -1.73
YSH1	YLR277C	VIK1	Q12045	647 aa		4.26	□□□□□ -1.73
YSH1	YLR277C	AEP3	Q12089	606 aa		4.26	□□□□□ -1.73
YSH1	YLR277C	YPR022C	Q12139	1133 aa		4.26	□□□□□ -1.73
YSH1	YLR277C	HSL1	P34244	1518 aa		4.25	□□□□□ -1.73
YSH1	YLR277C	TAF2	P23255	1407 aa		4.25	□□□□□ -1.73
YSH1	YLR277C	RAV1	P47104	1357 aa		4.25	□□□□□ -1.73
YSH1	YLR277C	HIS4	P00815	799 aa	Known RBP	4.25	□□□□□ -1.73
YSH1	YLR277C	CIT1	P00890	479 aa		4.25	□□□□□ -1.73
YSH1	YLR277C	SIR3	P06701	978 aa		4.25	□□□□□ -1.73
YSH1	YLR277C	SNF1	P06782	633 aa	Known RBP	4.25	□□□□□ -1.73
YSH1	YLR277C	MIS1	P09440	975 aa	Known RBP	4.25	□□□□□ -1.73
YSH1	YLR277C	GCD2	P12754	651 aa	Predicted RBP	4.25	□□□□□ -1.73
YSH1	YLR277C	PRP9	P19736	530 aa	Known RBP	4.25	□□□□□ -1.73
YSH1	YLR277C	MSB1	P21339	1137 aa	Known RBP	4.25	□□□□□ -1.73
YSH1	YLR277C	PRP28	P23394	588 aa		4.25	□□□□□ -1.73
YSH1	YLR277C	PRP19	P32523	503 aa	Known RBP	4.25	□□□□□ -1.73
YSH1	YLR277C	VPS17	P32913	551 aa		4.25	□□□□□ -1.73
YSH1	YLR277C	RDH54	P38086	958 aa		4.25	□□□□□ -1.73
YSH1	YLR277C	POL12	P38121	705 aa	Predicted RBP	4.25	□□□□□ -1.73
YSH1	YLR277C	STP2	P38704	541 aa		4.25	□□□□□ -1.73
YSH1	YLR277C	LSM12	P38828	187 aa	Known RBP	4.25	□□□□□ -1.73
YSH1	YLR277C	THO1	P40040	218 aa	Known RBP	4.25	□□□□□ -1.73
YSH1	YLR277C	COX16	P47081	118 aa		4.25	□□□□□ -1.73
YSH1	YLR277C	POL32	P47110	350 aa		4.25	□□□□□ -1.73
YSH1	YLR277C	YJR098C	P47139	656 aa		4.25	□□□□□ -1.73
YSH1	YLR277C	MAL11	P53048	616 aa		4.25	□□□□□ -1.73
YSH1	YLR277C	MLC1	P53141	149 aa		4.25	□□□□□ -1.73
YSH1	YLR277C	YBP2	P53169	641 aa		4.25	□□□□□ -1.73
YSH1	YLR277C	HST3	P53687	447 aa		4.25	□□□□□ -1.73
YSH1	YLR277C	HEF3	P53978	1044 aa	Known RBP	4.25	□□□□□ -1.73
YSH1	YLR277C	MAK10	Q02197	733 aa		4.25	□□□□□ -1.73
YSH1	YLR277C	COA4	Q05809	96 aa		4.25	□□□□□ -1.73
YSH1	YLR277C	YEH2	Q07950	538 aa		4.25	□□□□□ -1.73
YSH1	YLR277C	DSE3	Q08729	430 aa		4.25	□□□□□ -1.73
YSH1	YLR277C	YDR056C	Q12025	205 aa		4.25	□□□□□ -1.73
YSH1	YLR277C	FAP7	Q12055	197 aa	Predicted RBP	4.25	□□□□□ -1.73
YSH1	YLR277C	YDL109C	Q12103	647 aa		4.25	□□□□□ -1.73
YSH1	YLR277C	FRT1	Q99332	602 aa		4.25	□□□□□ -1.73
YSH1	YLR277C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
YSH1	YLR277C	MET6	P05694	767 aa	Known RBP	4.24	□□□□□ -1.73
YSH1	YLR277C	YCR016W	P25617	290 aa	Known RBP	4.24	□□□□□ -1.73
YSH1	YLR277C	HMX1	P32339	317 aa		4.24	□□□□□ -1.73
YSH1	YLR277C	HXT3	P32466	567 aa	Known RBP	4.24	□□□□□ -1.73
YSH1	YLR277C	CBF2	P32504	956 aa		4.24	□□□□□ -1.73
YSH1	YLR277C	GDA1	P32621	518 aa		4.24	□□□□□ -1.73
YSH1	YLR277C	MRX3	P38172	270 aa		4.24	□□□□□ -1.73
YSH1	YLR277C	RIM4	P38741	713 aa		4.24	□□□□□ -1.73
YSH1	YLR277C	MNL1	P38888	796 aa		4.24	□□□□□ -1.73
YSH1	YLR277C	SHQ1	P40486	507 aa	Predicted RBP	4.24	□□□□□ -1.73
YSH1	YLR277C	YJR120W	P47157	116 aa		4.24	□□□□□ -1.73
YSH1	YLR277C	TAF4	P50105	388 aa		4.24	□□□□□ -1.73
YSH1	YLR277C	PIB2	P53191	635 aa		4.24	□□□□□ -1.73
YSH1	YLR277C	TOF1	P53840	1238 aa		4.24	□□□□□ -1.73
YSH1	YLR277C	SLU7	Q02775	382 aa	Known RBP	4.24	□□□□□ -1.73
YSH1	YLR277C	PPM2	Q08282	695 aa		4.24	□□□□□ -1.73
YSH1	YLR277C	MET32	Q12041	191 aa		4.24	□□□□□ -1.73
YSH1	YLR277C	APC11	Q12157	165 aa		4.24	□□□□□ -1.73
YSH1	YLR277C	MCM16	Q12262	181 aa		4.24	□□□□□ -1.73
YSH1	YLR277C	SPO21	Q12411	609 aa		4.24	□□□□□ -1.73
YSH1	YLR277C	TMA7	Q3E764	64 aa	Known RBP	4.24	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms