RNA–Protein interactions for RNA: YLR275W

SMD2, Transcript of Core Sm protein Sm D2, yeast

Gene SMD2, Length 333 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMD2	YLR275W	NSE5	Q03718	556 aa		4.74	□□□□□ -1.65
SMD2	YLR275W	PHO5	P00635	467 aa		4.73	□□□□□ -1.65
SMD2	YLR275W	STE12	P13574	688 aa		4.73	□□□□□ -1.65
SMD2	YLR275W	PRE4	P30657	266 aa		4.73	□□□□□ -1.65
SMD2	YLR275W	BRN1	P38170	754 aa		4.73	□□□□□ -1.65
SMD2	YLR275W	VID28	P40547	921 aa		4.73	□□□□□ -1.65
SMD2	YLR275W	SNF12	P53628	566 aa		4.73	□□□□□ -1.65
SMD2	YLR275W	TMN3	P40071	706 aa		4.72	□□□□□ -1.65
SMD2	YLR275W	YGL081W	P53156	320 aa		4.72	□□□□□ -1.65
SMD2	YLR275W	FDC1	Q03034	503 aa		4.72	□□□□□ -1.65
SMD2	YLR275W	NGL2	Q03264	515 aa	Known RBP	4.72	□□□□□ -1.65
SMD2	YLR275W	YDR179W-A	Q03983	463 aa		4.72	□□□□□ -1.65
SMD2	YLR275W	COQ11	Q05892	277 aa		4.72	□□□□□ -1.65
SMD2	YLR275W	MDM20	Q12387	796 aa	Known RBP	4.72	□□□□□ -1.65
SMD2	YLR275W	YNL162W-A	Q3E7A8	72 aa		4.72	□□□□□ -1.65
SMD2	YLR275W	CDC26	P14724	124 aa		4.71	□□□□□ -1.66
SMD2	YLR275W	RPA135	P22138	1203 aa	Known RBP	4.71	□□□□□ -1.66
SMD2	YLR275W	CRG1	P38892	291 aa	RIP-Chip data	4.71	□□□□□ -1.66	not detected
SMD2	YLR275W	DAK1	P54838	584 aa	Known RBP	4.71	□□□□□ -1.66
SMD2	YLR275W	HLR1	Q04429	423 aa		4.71	□□□□□ -1.66
SMD2	YLR275W	TUP1	P16649	713 aa		4.7	□□□□□ -1.66
SMD2	YLR275W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.7	□□□□□ -1.66	not detected
SMD2	YLR275W	SAT4	P25333	603 aa	Known RBP	4.7	□□□□□ -1.66
SMD2	YLR275W	MF(ALPHA)2	P32435	120 aa		4.7	□□□□□ -1.66
SMD2	YLR275W	PMC1	P38929	1173 aa	Predicted RBP	4.7	□□□□□ -1.66
SMD2	YLR275W	FTR1	P40088	404 aa		4.7	□□□□□ -1.66
SMD2	YLR275W	PRM2	P40534	656 aa		4.7	□□□□□ -1.66
SMD2	YLR275W	ENP2	P48234	707 aa	Known RBP	4.7	□□□□□ -1.66
SMD2	YLR275W	ASN1	P49089	572 aa	Known RBP	4.7	□□□□□ -1.66
SMD2	YLR275W	TPK2	P06245	380 aa		4.69	□□□□□ -1.66
SMD2	YLR275W	UGP1	P32861	499 aa	Known RBP	4.69	□□□□□ -1.66
SMD2	YLR275W	CDS1	P38221	457 aa		4.69	□□□□□ -1.66
SMD2	YLR275W	YHR033W	P38690	423 aa		4.69	□□□□□ -1.66
SMD2	YLR275W	THI6	P41835	540 aa		4.69	□□□□□ -1.66
SMD2	YLR275W	TIM50	Q02776	476 aa		4.69	□□□□□ -1.66
SMD2	YLR275W	SLK19	Q08581	821 aa	Known RBP	4.69	□□□□□ -1.66
SMD2	YLR275W	STE4	P18851	423 aa		4.68	□□□□□ -1.66
SMD2	YLR275W	VPS34	P22543	875 aa		4.68	□□□□□ -1.66
SMD2	YLR275W	PPE1	P38796	400 aa		4.68	□□□□□ -1.66
SMD2	YLR275W	UBP12	P39538	1254 aa		4.68	□□□□□ -1.66
SMD2	YLR275W	RNR4	P49723	345 aa	Known RBP	4.68	□□□□□ -1.66
SMD2	YLR275W	YGR054W	P53235	642 aa	Known RBP	4.68	□□□□□ -1.66
SMD2	YLR275W	CEF1	Q03654	590 aa	Predicted RBP	4.68	□□□□□ -1.66
SMD2	YLR275W	TRS23	Q03784	219 aa		4.68	□□□□□ -1.66
SMD2	YLR275W	MRI1	Q06489	411 aa	Known RBP	4.68	□□□□□ -1.66
SMD2	YLR275W	AIM44	Q99299	758 aa		4.68	□□□□□ -1.66
SMD2	YLR275W	DGR2	P32330	852 aa		4.67	□□□□□ -1.66
SMD2	YLR275W	MTC7	P32633	139 aa		4.67	□□□□□ -1.66
SMD2	YLR275W	DUG1	P43616	481 aa	Known RBP	4.67	□□□□□ -1.66
SMD2	YLR275W	FMP30	Q02883	468 aa		4.67	□□□□□ -1.66
SMD2	YLR275W	THI7	Q05998	598 aa		4.67	□□□□□ -1.66
SMD2	YLR275W	AIM41	Q12032	185 aa		4.67	□□□□□ -1.66
SMD2	YLR275W	YPR027C	Q12079	277 aa		4.67	□□□□□ -1.66
SMD2	YLR275W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.67	□□□□□ -1.66	not detected
SMD2	YLR275W	ADE5,7	P07244	802 aa	Known RBP	4.66	□□□□□ -1.66
SMD2	YLR275W	HOM2	P13663	365 aa	Known RBP	4.66	□□□□□ -1.66
SMD2	YLR275W	YMC1	P32331	307 aa		4.66	□□□□□ -1.66
SMD2	YLR275W	DAL3	P32459	195 aa		4.66	□□□□□ -1.66
SMD2	YLR275W	HXT4	P32467	576 aa		4.66	□□□□□ -1.66
SMD2	YLR275W	ORC2	P32833	620 aa		4.66	□□□□□ -1.66
SMD2	YLR275W	MRPL7	P36519	292 aa		4.66	□□□□□ -1.66
SMD2	YLR275W	MFM1	Q02783	413 aa		4.66	□□□□□ -1.66
SMD2	YLR275W	EFR3	Q03653	782 aa	Known RBP	4.66	□□□□□ -1.66
SMD2	YLR275W	YCG1	Q06680	1035 aa		4.66	□□□□□ -1.66
SMD2	YLR275W	ULA1	Q12059	462 aa		4.66	□□□□□ -1.66
SMD2	YLR275W	RMP1	Q12530	201 aa		4.66	□□□□□ -1.66
SMD2	YLR275W	HMG2	P12684	1045 aa		4.65	□□□□□ -1.67
SMD2	YLR275W	SER1	P33330	395 aa	Known RBP	4.65	□□□□□ -1.67
SMD2	YLR275W	DHR2	P36009	735 aa	Predicted RBP	4.65	□□□□□ -1.67
SMD2	YLR275W	YEL025C	P39991	1188 aa		4.65	□□□□□ -1.67
SMD2	YLR275W	YEN1	P40028	759 aa		4.65	□□□□□ -1.67
SMD2	YLR275W	GPP2	P40106	250 aa	Known RBP	4.65	□□□□□ -1.67
SMD2	YLR275W	YIP4	P53093	235 aa		4.65	□□□□□ -1.67
SMD2	YLR275W	SKY1	Q03656	742 aa		4.65	□□□□□ -1.67
SMD2	YLR275W	OSW1	Q08692	278 aa		4.65	□□□□□ -1.67
SMD2	YLR275W	ATP12	P22135	325 aa		4.64	□□□□□ -1.67
SMD2	YLR275W	EHT1	P38295	451 aa		4.64	□□□□□ -1.67
SMD2	YLR275W	PIH1	P38768	344 aa		4.64	□□□□□ -1.67
SMD2	YLR275W	YDL183C	P48569	320 aa		4.64	□□□□□ -1.67
SMD2	YLR275W	YGL117W	P53133	265 aa		4.64	□□□□□ -1.67
SMD2	YLR275W	CPR8	P53728	308 aa		4.64	□□□□□ -1.67
SMD2	YLR275W	NGL1	Q08213	363 aa	Known RBP	4.64	□□□□□ -1.67
SMD2	YLR275W	EUG1	P32474	517 aa		4.63	□□□□□ -1.67
SMD2	YLR275W	RIM4	P38741	713 aa		4.63	□□□□□ -1.67
SMD2	YLR275W	SQS1	P53866	767 aa	Known RBP	4.63	□□□□□ -1.67
SMD2	YLR275W	ARG7	Q04728	441 aa		4.63	□□□□□ -1.67
SMD2	YLR275W	TRE2	Q08693	809 aa		4.63	□□□□□ -1.67
SMD2	YLR275W	YPL216W	Q08964	1102 aa		4.63	□□□□□ -1.67
SMD2	YLR275W	ZPS1	Q12512	249 aa		4.63	□□□□□ -1.67
SMD2	YLR275W	TUF1	P02992	437 aa	Known RBP	4.62	□□□□□ -1.67
SMD2	YLR275W	MDM10	P18409	493 aa		4.62	□□□□□ -1.67
SMD2	YLR275W	HOP1	P20050	605 aa		4.62	□□□□□ -1.67
SMD2	YLR275W	AEP2	P22136	580 aa		4.62	□□□□□ -1.67
SMD2	YLR275W	CNE1	P27825	502 aa		4.62	□□□□□ -1.67
SMD2	YLR275W	SRP68	P38687	599 aa	Known RBP	4.62	□□□□□ -1.67
SMD2	YLR275W	PEA2	P40091	420 aa		4.62	□□□□□ -1.67
SMD2	YLR275W	LRO1	P40345	661 aa		4.62	□□□□□ -1.67
SMD2	YLR275W	NIT2	P47016	307 aa		4.62	□□□□□ -1.67
SMD2	YLR275W	BUD17	P53727	317 aa		4.62	□□□□□ -1.67
SMD2	YLR275W	ERG11	P10614	530 aa		4.61	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 31.3 ms