RNA–Protein interactions for RNA: YLR058C

SHM2, Transcript of Cytosolic serine hydroxymethyltransferase, yeastyeast

Gene SHM2, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM2YLR058C YBR053CP38235 358 aa10.91□□□□□ -0.66
SHM2YLR058C FHL1P39521 936 aa10.91□□□□□ -0.66
SHM2YLR058C PRK1P40494 810 aa10.91□□□□□ -0.66
SHM2YLR058C VPS25P47142 202 aa10.91□□□□□ -0.66
SHM2YLR058C YGR283CP53336 341 aaPredicted RBP10.91□□□□□ -0.66
SHM2YLR058C YNL040WP53960 456 aaPredicted RBP10.91□□□□□ -0.66
SHM2YLR058C CDC55Q00362 526 aa10.91□□□□□ -0.66
SHM2YLR058C SPO71Q03868 1245 aa10.91□□□□□ -0.66
SHM2YLR058C HRD3Q05787 833 aa10.91□□□□□ -0.66
SHM2YLR058C KAP95Q06142 861 aaKnown RBP10.91□□□□□ -0.66
SHM2YLR058C THI20Q08224 551 aa10.91□□□□□ -0.66
SHM2YLR058C CIR2Q08822 631 aa10.91□□□□□ -0.66
SHM2YLR058C MNL2Q12205 849 aa10.91□□□□□ -0.66
SHM2YLR058C RAD10P06838 210 aa10.9□□□□□ -0.66
SHM2YLR058C CNS1P33313 385 aa10.9□□□□□ -0.66
SHM2YLR058C PCA1P38360 1216 aa10.9□□□□□ -0.66
SHM2YLR058C MMS21P38632 267 aa10.9□□□□□ -0.66
SHM2YLR058C NMD3P38861 518 aaKnown RBP10.9□□□□□ -0.66
SHM2YLR058C SAK1P38990 1142 aa10.9□□□□□ -0.66
SHM2YLR058C TMA108P40462 946 aa10.9□□□□□ -0.66
SHM2YLR058C MAF1P41910 395 aa10.9□□□□□ -0.66
SHM2YLR058C YNL108CP53929 270 aa10.9□□□□□ -0.66
SHM2YLR058C YPK1P12688 680 aaKnown RBP10.89□□□□□ -0.67
SHM2YLR058C VTC4P47075 721 aa10.89□□□□□ -0.67
SHM2YLR058C YML6P51998 286 aa10.89□□□□□ -0.67
SHM2YLR058C YNL247WP53852 767 aaKnown RBP10.89□□□□□ -0.67
SHM2YLR058C YNL034WP53963 612 aa10.89□□□□□ -0.67
SHM2YLR058C YNL018CP53976 612 aa10.89□□□□□ -0.67
SHM2YLR058C CEG1Q01159 459 aaPredicted RBP10.89□□□□□ -0.67
SHM2YLR058C HER2Q03557 464 aa10.89□□□□□ -0.67
SHM2YLR058C RKM2Q03942 479 aa10.89□□□□□ -0.67
SHM2YLR058C FMP25Q08023 583 aa10.89□□□□□ -0.67
SHM2YLR058C RPO26P20435 155 aa10.88□□□□□ -0.67
SHM2YLR058C DSS4P32601 143 aa10.88□□□□□ -0.67
SHM2YLR058C RIM4P38741 713 aa10.88□□□□□ -0.67
SHM2YLR058C ERP2P39704 215 aa10.88□□□□□ -0.67
SHM2YLR058C SAP185P40856 1058 aa10.88□□□□□ -0.67
SHM2YLR058C ECM22Q05958 814 aaPredicted RBP10.88□□□□□ -0.67
SHM2YLR058C THI7Q05998 598 aa10.88□□□□□ -0.67
SHM2YLR058C THI21Q08975 551 aa10.88□□□□□ -0.67
SHM2YLR058C RGR1P19263 1082 aa10.87□□□□□ -0.67
SHM2YLR058C PEX1P24004 1043 aa10.87□□□□□ -0.67
SHM2YLR058C MEI4P29467 408 aa10.87□□□□□ -0.67
SHM2YLR058C GCD6P32501 712 aaKnown RBP10.87□□□□□ -0.67
SHM2YLR058C ARG2P40360 574 aa10.87□□□□□ -0.67
SHM2YLR058C MTD1Q02046 320 aaKnown RBP10.87□□□□□ -0.67
SHM2YLR058C SPG3Q04398 127 aaPredicted RBP10.87□□□□□ -0.67
SHM2YLR058C YLR257WQ06146 321 aaKnown RBP10.87□□□□□ -0.67
SHM2YLR058C NUR1Q12066 484 aa10.87□□□□□ -0.67
SHM2YLR058C YDR018CQ12185 396 aa10.87□□□□□ -0.67
SHM2YLR058C YPR117WQ06116 2489 aa10.86□□□□□ -0.67
SHM2YLR058C SPE1P08432 466 aa10.86□□□□□ -0.67
SHM2YLR058C PDE1P22434 369 aa10.86□□□□□ -0.67
SHM2YLR058C PUF4P25339 888 aaKnown RBP RIP-Chip data10.86□□□□□ -0.67not detected
SHM2YLR058C TSA1P34760 196 aaKnown RBP10.86□□□□□ -0.67
SHM2YLR058C YKR051WP36142 418 aa10.86□□□□□ -0.67
SHM2YLR058C TIF5P38431 405 aaKnown RBP10.86□□□□□ -0.67
SHM2YLR058C MSG5P38590 489 aa10.86□□□□□ -0.67
SHM2YLR058C FLC2P39719 783 aa10.86□□□□□ -0.67
SHM2YLR058C YMR134WP40207 237 aa10.86□□□□□ -0.67
SHM2YLR058C NMD5P46970 1048 aa10.86□□□□□ -0.67
SHM2YLR058C YJL045WP47052 634 aa10.86□□□□□ -0.67
SHM2YLR058C BFA1P47113 574 aa10.86□□□□□ -0.67
SHM2YLR058C BET4Q00618 327 aa10.86□□□□□ -0.67
SHM2YLR058C NOP6Q07623 225 aaKnown RBP10.86□□□□□ -0.67
SHM2YLR058C APL5Q08951 932 aaKnown RBP10.86□□□□□ -0.67
SHM2YLR058C PAB1P04147 577 aaKnown RBP RIP-Chip data10.85□□□□□ -0.67not detected
SHM2YLR058C CDC27P38042 758 aa10.85□□□□□ -0.67
SHM2YLR058C PBP2P38151 413 aaKnown RBP RIP-Chip data10.85□□□□□ -0.67not detected
SHM2YLR058C SSP1P38871 571 aa10.85□□□□□ -0.67
SHM2YLR058C MKT1P40850 830 aaKnown RBP10.85□□□□□ -0.67
SHM2YLR058C KTR6P54070 446 aa10.85□□□□□ -0.67
SHM2YLR058C UTP6Q02354 440 aaKnown RBP10.85□□□□□ -0.67
SHM2YLR058C INA17Q02888 182 aa10.85□□□□□ -0.67
SHM2YLR058C GCN5Q03330 439 aa10.85□□□□□ -0.67
SHM2YLR058C AIM32Q04689 311 aa10.85□□□□□ -0.67
SHM2YLR058C CCP1P00431 361 aa10.84□□□□□ -0.67
SHM2YLR058C CDC8P00572 216 aa10.84□□□□□ -0.67
SHM2YLR058C PRP9P19736 530 aaKnown RBP10.84□□□□□ -0.67
SHM2YLR058C SLY1P22213 666 aa10.84□□□□□ -0.67
SHM2YLR058C DAL1P32375 460 aa10.84□□□□□ -0.67
SHM2YLR058C HXT3P32466 567 aaKnown RBP10.84□□□□□ -0.67
SHM2YLR058C UBC6P33296 250 aaPredicted RBP10.84□□□□□ -0.67
SHM2YLR058C YBR225WP38321 900 aa10.84□□□□□ -0.67
SHM2YLR058C SAW1P39735 261 aa10.84□□□□□ -0.67
SHM2YLR058C ALY2P47029 1046 aa10.84□□□□□ -0.67
SHM2YLR058C PEX31P53203 462 aa10.84□□□□□ -0.67
SHM2YLR058C RIO1Q12196 484 aaKnown RBP10.84□□□□□ -0.67
SHM2YLR058C ARP7Q12406 477 aa10.84□□□□□ -0.67
SHM2YLR058C IZH4Q99393 312 aa10.84□□□□□ -0.67
SHM2YLR058C YCR015CP25616 317 aa10.84□□□□□ -0.67
SHM2YLR058C SYN8P31377 255 aa10.84□□□□□ -0.67
SHM2YLR058C OLA1P38219 394 aaKnown RBP10.84□□□□□ -0.67
SHM2YLR058C ECM2P38241 364 aaKnown RBP10.84□□□□□ -0.67
SHM2YLR058C YNL320WP42840 284 aa10.84□□□□□ -0.67
SHM2YLR058C YNL144CP53907 740 aa10.84□□□□□ -0.67
SHM2YLR058C SND1Q04007 877 aa10.84□□□□□ -0.67
SHM2YLR058C AAD4Q07747 329 aa10.84□□□□□ -0.67
SHM2YLR058C LCB4Q12246 624 aa10.84□□□□□ -0.67
SHM2YLR058C RAD16P31244 790 aa10.83□□□□□ -0.68
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms