RNA–Protein interactions for RNA: YKR100C

SKG1, Transcript of Transmembrane protein with a role in cell wall polymer composition, yeastyeast

Gene SKG1, Length 1,068 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKG1YKR100C BAP3P41815 604 aa6.97□□□□□ -1.29
SKG1YKR100C UBC11P52492 156 aa6.97□□□□□ -1.29
SKG1YKR100C PRP8P33334 2413 aaKnown RBP6.97□□□□□ -1.29
SKG1YKR100C SRD1P09007 221 aa6.96□□□□□ -1.3
SKG1YKR100C YKR051WP36142 418 aa6.96□□□□□ -1.3
SKG1YKR100C YHR112CP38716 378 aa6.96□□□□□ -1.3
SKG1YKR100C FMP52P40008 231 aa6.96□□□□□ -1.3
SKG1YKR100C ORC4P54791 529 aa6.96□□□□□ -1.3
SKG1YKR100C DIB1Q06819 143 aaPredicted RBP6.96□□□□□ -1.3
SKG1YKR100C MRH1Q12117 320 aaPredicted RBP6.96□□□□□ -1.3
SKG1YKR100C PEX6P33760 1030 aa6.95□□□□□ -1.3
SKG1YKR100C PAF1P38351 445 aa6.95□□□□□ -1.3
SKG1YKR100C MIP6P38760 659 aaKnown RBP6.95□□□□□ -1.3
SKG1YKR100C UGO1Q03327 502 aa6.95□□□□□ -1.3
SKG1YKR100C NHX1Q04121 633 aa6.95□□□□□ -1.3
SKG1YKR100C SGO1Q08490 590 aa6.95□□□□□ -1.3
SKG1YKR100C HOG1P32485 435 aa6.94□□□□□ -1.3
SKG1YKR100C ARG5,6Q01217 863 aa6.94□□□□□ -1.3
SKG1YKR100C RAD18P10862 487 aa6.93□□□□□ -1.3
SKG1YKR100C HIR1P32479 840 aa6.93□□□□□ -1.3
SKG1YKR100C APL2P36000 726 aaPredicted RBP6.93□□□□□ -1.3
SKG1YKR100C OSW7P43611 510 aa6.93□□□□□ -1.3
SKG1YKR100C TEL2P53038 688 aa6.93□□□□□ -1.3
SKG1YKR100C MTL1P53214 551 aa6.93□□□□□ -1.3
SKG1YKR100C HSL7P38274 827 aa6.92□□□□□ -1.3
SKG1YKR100C LYS9P38999 446 aa6.92□□□□□ -1.3
SKG1YKR100C RPN7Q06103 429 aaKnown RBP6.92□□□□□ -1.3
SKG1YKR100C TUS1Q06412 1307 aa6.92□□□□□ -1.3
SKG1YKR100C SER1P33330 395 aaKnown RBP6.91□□□□□ -1.3
SKG1YKR100C ERG7P38604 731 aa6.91□□□□□ -1.3
SKG1YKR100C CCT3P39077 534 aaKnown RBP6.91□□□□□ -1.3
SKG1YKR100C UBC9P50623 157 aaPredicted RBP6.91□□□□□ -1.3
SKG1YKR100C CTK1Q03957 528 aaKnown RBP6.91□□□□□ -1.3
SKG1YKR100C MSL5Q12186 476 aaKnown RBP RIP-Chip data6.91□□□□□ -1.3not detected
SKG1YKR100C ERG6P25087 383 aaKnown RBP6.9□□□□□ -1.3
SKG1YKR100C FRD1P32614 470 aaKnown RBP6.9□□□□□ -1.3
SKG1YKR100C CBR1P38626 284 aaKnown RBP6.9□□□□□ -1.3
SKG1YKR100C FMO1P38866 432 aa6.9□□□□□ -1.3
SKG1YKR100C REV7P38927 245 aa6.9□□□□□ -1.3
SKG1YKR100C SSL2Q00578 843 aa6.9□□□□□ -1.3
SKG1YKR100C MCM21Q06675 368 aa6.9□□□□□ -1.3
SKG1YKR100C NTG2Q08214 380 aa6.9□□□□□ -1.3
SKG1YKR100C RRG1Q12167 365 aaPredicted RBP6.9□□□□□ -1.3
SKG1YKR100C HRP1Q99383 534 aaKnown RBP6.9□□□□□ -1.3
SKG1YKR100C ACC1Q00955 2233 aaKnown RBP6.89□□□□□ -1.31
SKG1YKR100C YKR018CP36114 725 aa6.89□□□□□ -1.31
SKG1YKR100C TRZ1P36159 838 aaPredicted RBP6.89□□□□□ -1.31
SKG1YKR100C APT2P36973 181 aa6.89□□□□□ -1.31
SKG1YKR100C UBP16Q02863 499 aa6.89□□□□□ -1.31
SKG1YKR100C MET6P05694 767 aaKnown RBP6.88□□□□□ -1.31
SKG1YKR100C SIR3P06701 978 aa6.88□□□□□ -1.31
SKG1YKR100C PCL2P25693 308 aa6.88□□□□□ -1.31
SKG1YKR100C MVD1P32377 396 aaKnown RBP6.88□□□□□ -1.31
SKG1YKR100C PAN2P53010 1115 aaPredicted RBP6.88□□□□□ -1.31
SKG1YKR100C PCL10P53124 433 aa6.88□□□□□ -1.31
SKG1YKR100C POB3Q04636 552 aaKnown RBP6.88□□□□□ -1.31
SKG1YKR100C RGC1Q06108 1083 aaKnown RBP6.88□□□□□ -1.31
SKG1YKR100C SUT2Q12286 268 aa6.88□□□□□ -1.31
SKG1YKR100C YKL033W-AQ86ZR7 236 aa6.88□□□□□ -1.31
SKG1YKR100C YPT53P36019 220 aa6.87□□□□□ -1.31
SKG1YKR100C SFB3P38810 929 aa6.87□□□□□ -1.31
SKG1YKR100C NUP60P39705 539 aa6.87□□□□□ -1.31
SKG1YKR100C AIM14P53109 570 aa6.87□□□□□ -1.31
SKG1YKR100C ARP4P80428 489 aa6.87□□□□□ -1.31
SKG1YKR100C ICL2Q12031 575 aa6.87□□□□□ -1.31
SKG1YKR100C KIN3P22209 435 aa6.86□□□□□ -1.31
SKG1YKR100C TDP1P38319 544 aa6.86□□□□□ -1.31
SKG1YKR100C DOT6P40059 670 aaKnown RBP6.86□□□□□ -1.31
SKG1YKR100C YAP1802P53309 568 aa6.86□□□□□ -1.31
SKG1YKR100C SMX3P54999 86 aaPredicted RBP6.86□□□□□ -1.31
SKG1YKR100C LEE1Q02799 301 aaKnown RBP6.86□□□□□ -1.31
SKG1YKR100C FPR4Q06205 392 aaPredicted RBP6.86□□□□□ -1.31
SKG1YKR100C ATG33Q06485 197 aa6.86□□□□□ -1.31
SKG1YKR100C HMG1P12683 1054 aa6.85□□□□□ -1.31
SKG1YKR100C CDC43P18898 376 aa6.85□□□□□ -1.31
SKG1YKR100C HRB1P38922 454 aaKnown RBP RIP-Chip data6.85□□□□□ -1.31not detected
SKG1YKR100C VPS73P53142 486 aaKnown RBP6.85□□□□□ -1.31
SKG1YKR100C HMO1Q03973 246 aaKnown RBP6.85□□□□□ -1.31
SKG1YKR100C MDM20Q12387 796 aaKnown RBP6.85□□□□□ -1.31
SKG1YKR100C YML133CQ03099 1374 aa6.84□□□□□ -1.31
SKG1YKR100C PYC1P11154 1178 aaKnown RBP6.84□□□□□ -1.31
SKG1YKR100C MCM3P24279 971 aaKnown RBP6.84□□□□□ -1.31
SKG1YKR100C YEL1P34225 687 aa6.84□□□□□ -1.31
SKG1YKR100C PCM1P38628 557 aaKnown RBP6.84□□□□□ -1.31
SKG1YKR100C GET2P40056 285 aa6.84□□□□□ -1.31
SKG1YKR100C GID8P40208 455 aa6.84□□□□□ -1.31
SKG1YKR100C REC102Q02721 264 aa6.84□□□□□ -1.31
SKG1YKR100C COG8Q04632 607 aa6.84□□□□□ -1.31
SKG1YKR100C SFL1P20134 766 aa6.83□□□□□ -1.32
SKG1YKR100C RNR1P21524 888 aaKnown RBP6.83□□□□□ -1.32
SKG1YKR100C YFR016CP43597 1233 aaKnown RBP6.83□□□□□ -1.32
SKG1YKR100C GIN4Q12263 1142 aa6.83□□□□□ -1.32
SKG1YKR100C GFA1P14742 717 aaKnown RBP6.82□□□□□ -1.32
SKG1YKR100C MNN4P36044 1178 aa6.82□□□□□ -1.32
SKG1YKR100C AFG3P39925 761 aa6.82□□□□□ -1.32
SKG1YKR100C NDC80P40460 691 aa6.82□□□□□ -1.32
SKG1YKR100C TAH11P47112 604 aa6.82□□□□□ -1.32
SKG1YKR100C FHN1P53279 174 aa6.82□□□□□ -1.32
SKG1YKR100C BRE5P53741 515 aaKnown RBP6.82□□□□□ -1.32
SKG1YKR100C TY3A-GQ12173 290 aa6.82□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 91.7 ms