RNA–Protein interactions for RNA: YJR024C

MDE1, Transcript of 5'-methylthioribulose-1-phosphate dehydratase, yeastyeast

Gene MDE1, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDE1YJR024C END3P39013 349 aa6.72□□□□□ -1.33
MDE1YJR024C SAP1P39955 897 aaKnown RBP6.72□□□□□ -1.33
MDE1YJR024C TMN3P40071 706 aa6.72□□□□□ -1.33
MDE1YJR024C INP52P50942 1183 aa6.72□□□□□ -1.33
MDE1YJR024C PUS2P53167 370 aa6.72□□□□□ -1.33
MDE1YJR024C UTP6Q02354 440 aaKnown RBP6.72□□□□□ -1.33
MDE1YJR024C MTG1Q03151 367 aaPredicted RBP6.72□□□□□ -1.33
MDE1YJR024C UFO1Q04511 668 aa6.72□□□□□ -1.33
MDE1YJR024C DNL4Q08387 944 aaPredicted RBP6.72□□□□□ -1.33
MDE1YJR024C YOR022CQ12204 715 aa6.72□□□□□ -1.33
MDE1YJR024C RAD1P06777 1100 aa6.71□□□□□ -1.34
MDE1YJR024C PRP9P19736 530 aaKnown RBP6.71□□□□□ -1.34
MDE1YJR024C RSA4P25382 515 aaKnown RBP6.71□□□□□ -1.34
MDE1YJR024C GCD6P32501 712 aaKnown RBP6.71□□□□□ -1.34
MDE1YJR024C PEP12P32854 288 aa6.71□□□□□ -1.34
MDE1YJR024C CSE2P33308 149 aa6.71□□□□□ -1.34
MDE1YJR024C MUD2P36084 527 aaKnown RBP6.71□□□□□ -1.34
MDE1YJR024C HEL1P36113 551 aa6.71□□□□□ -1.34
MDE1YJR024C AGP2P38090 596 aa6.71□□□□□ -1.34
MDE1YJR024C ECM2P38241 364 aaKnown RBP6.71□□□□□ -1.34
MDE1YJR024C PCM1P38628 557 aaKnown RBP6.71□□□□□ -1.34
MDE1YJR024C MMS21P38632 267 aa6.71□□□□□ -1.34
MDE1YJR024C YHL026CP38740 315 aa6.71□□□□□ -1.34
MDE1YJR024C CIN4P39110 191 aa6.71□□□□□ -1.34
MDE1YJR024C RPT2P40327 437 aaKnown RBP6.71□□□□□ -1.34
MDE1YJR024C YNL320WP42840 284 aa6.71□□□□□ -1.34
MDE1YJR024C SNZ3P43545 298 aa6.71□□□□□ -1.34
MDE1YJR024C ATG36P46983 293 aa6.71□□□□□ -1.34
MDE1YJR024C STB4P50104 949 aa6.71□□□□□ -1.34
MDE1YJR024C YGR130CP53278 816 aa6.71□□□□□ -1.34
MDE1YJR024C SNZ2P53824 298 aa6.71□□□□□ -1.34
MDE1YJR024C ARO80Q04052 950 aa6.71□□□□□ -1.34
MDE1YJR024C SXM1Q04175 944 aaKnown RBP6.71□□□□□ -1.34
MDE1YJR024C RUD3Q12234 484 aaKnown RBP6.71□□□□□ -1.34
MDE1YJR024C YDR524C-BQ3E6R4 66 aa6.71□□□□□ -1.34
MDE1YJR024C YLR422WQ06409 1932 aa6.7□□□□□ -1.34
MDE1YJR024C HEM1P09950 548 aaPredicted RBP6.7□□□□□ -1.34
MDE1YJR024C EST1P17214 699 aaPredicted RBP6.7□□□□□ -1.34
MDE1YJR024C VPS3P23643 1011 aa6.7□□□□□ -1.34
MDE1YJR024C SAT4P25333 603 aaKnown RBP6.7□□□□□ -1.34
MDE1YJR024C SEC1P30619 724 aaKnown RBP6.7□□□□□ -1.34
MDE1YJR024C ECM32P32644 1121 aaKnown RBP6.7□□□□□ -1.34
MDE1YJR024C MRP4P32902 394 aa6.7□□□□□ -1.34
MDE1YJR024C PBP2P38151 413 aaKnown RBP RIP-Chip data6.7□□□□□ -1.34not detected
MDE1YJR024C MSG5P38590 489 aa6.7□□□□□ -1.34
MDE1YJR024C KHA1P40309 873 aa6.7□□□□□ -1.34
MDE1YJR024C NMD5P46970 1048 aa6.7□□□□□ -1.34
MDE1YJR024C YML6P51998 286 aa6.7□□□□□ -1.34
MDE1YJR024C MUB1Q03162 620 aa6.7□□□□□ -1.34
MDE1YJR024C TIF35Q04067 274 aaKnown RBP6.7□□□□□ -1.34
MDE1YJR024C MDM38Q08179 573 aa6.7□□□□□ -1.34
MDE1YJR024C TRE1Q08919 783 aa6.7□□□□□ -1.34
MDE1YJR024C EMP46Q12396 444 aa6.7□□□□□ -1.34
MDE1YJR024C TUB3P09734 445 aaKnown RBP6.69□□□□□ -1.34
MDE1YJR024C SPO16P17122 198 aa6.69□□□□□ -1.34
MDE1YJR024C SFL1P20134 766 aa6.69□□□□□ -1.34
MDE1YJR024C TRX1P22217 103 aaKnown RBP6.69□□□□□ -1.34
MDE1YJR024C LRE1P25579 583 aaKnown RBP6.69□□□□□ -1.34
MDE1YJR024C POT1P27796 417 aaKnown RBP RIP-Chip data6.69□□□□□ -1.34not detected
MDE1YJR024C FRE1P32791 686 aa6.69□□□□□ -1.34
MDE1YJR024C KDX1P36005 433 aa6.69□□□□□ -1.34
MDE1YJR024C CCL1P37366 393 aa6.69□□□□□ -1.34
MDE1YJR024C VHC1P38329 1120 aa6.69□□□□□ -1.34
MDE1YJR024C PCA1P38360 1216 aa6.69□□□□□ -1.34
MDE1YJR024C YMR134WP40207 237 aa6.69□□□□□ -1.34
MDE1YJR024C ESL1P40456 1118 aa6.69□□□□□ -1.34
MDE1YJR024C RPL22BP56628 122 aaKnown RBP6.69□□□□□ -1.34
MDE1YJR024C RNT1Q02555 471 aa6.69□□□□□ -1.34
MDE1YJR024C UTP13Q05946 817 aaKnown RBP6.69□□□□□ -1.34
MDE1YJR024C STE23Q06010 1027 aa6.69□□□□□ -1.34
MDE1YJR024C AIM39Q08223 395 aa6.69□□□□□ -1.34
MDE1YJR024C REC8Q12188 680 aa6.69□□□□□ -1.34
MDE1YJR024C PUT4P15380 627 aa6.68□□□□□ -1.34
MDE1YJR024C PUF4P25339 888 aaKnown RBP RIP-Chip data6.68□□□□□ -1.34not detected
MDE1YJR024C CYS3P31373 394 aaKnown RBP6.68□□□□□ -1.34
MDE1YJR024C PLC1P32383 869 aa6.68□□□□□ -1.34
MDE1YJR024C SRB2P34162 210 aa6.68□□□□□ -1.34
MDE1YJR024C RPC37P36121 282 aa6.68□□□□□ -1.34
MDE1YJR024C SHE3P38272 425 aaKnown RBP6.68□□□□□ -1.34
MDE1YJR024C SWC5P38326 303 aa6.68□□□□□ -1.34
MDE1YJR024C DSE1P40077 573 aa6.68□□□□□ -1.34
MDE1YJR024C KTR7P40504 517 aa6.68□□□□□ -1.34
MDE1YJR024C INA22P40576 216 aa6.68□□□□□ -1.34
MDE1YJR024C ASG7P46993 209 aa6.68□□□□□ -1.34
MDE1YJR024C YJR039WP47107 1121 aa6.68□□□□□ -1.34
MDE1YJR024C STP1Q00947 519 aa6.68□□□□□ -1.34
MDE1YJR024C RCR2Q03446 210 aaKnown RBP6.68□□□□□ -1.34
MDE1YJR024C OMS1Q06668 471 aa6.68□□□□□ -1.34
MDE1YJR024C ESC8Q08119 714 aa6.68□□□□□ -1.34
MDE1YJR024C SDH5Q08230 162 aa6.68□□□□□ -1.34
MDE1YJR024C NOB1Q08444 459 aaKnown RBP6.68□□□□□ -1.34
MDE1YJR024C ACM1Q08981 209 aa6.68□□□□□ -1.34
MDE1YJR024C VPS54Q12071 889 aa6.68□□□□□ -1.34
MDE1YJR024C VPS5Q92331 675 aa6.68□□□□□ -1.34
MDE1YJR024C GAL80P04387 435 aa6.67□□□□□ -1.34
MDE1YJR024C CIT2P08679 460 aa6.67□□□□□ -1.34
MDE1YJR024C AEP2P22136 580 aa6.67□□□□□ -1.34
MDE1YJR024C PUP1P25043 261 aa6.67□□□□□ -1.34
MDE1YJR024C GAC1P28006 793 aa6.67□□□□□ -1.34
MDE1YJR024C ABZ1P37254 787 aaPredicted RBP6.67□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 179.7 ms