RNA–Protein interactions for RNA: YJL053W

PEP8, Transcript of Vacuolar protein component of the retromer, yeastyeast

Gene PEP8, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP8YJL053W MGS1P40151 587 aa3.23□□□□□ -1.89
PEP8YJL053W ATG33Q06485 197 aa3.23□□□□□ -1.89
PEP8YJL053W THI73Q07904 523 aa3.23□□□□□ -1.89
PEP8YJL053W GIN4Q12263 1142 aa3.23□□□□□ -1.89
PEP8YJL053W YOR111WQ99210 232 aa3.23□□□□□ -1.89
PEP8YJL053W Q0142Q9ZZW4 58 aa3.23□□□□□ -1.89
PEP8YJL053W ERG20P08524 352 aaKnown RBP3.22□□□□□ -1.89
PEP8YJL053W HMG1P12683 1054 aa3.22□□□□□ -1.89
PEP8YJL053W FEN2P25621 512 aaKnown RBP3.22□□□□□ -1.89
PEP8YJL053W RIM4P38741 713 aa3.22□□□□□ -1.89
PEP8YJL053W BFA1P47113 574 aa3.22□□□□□ -1.89
PEP8YJL053W MET13P53128 600 aa3.22□□□□□ -1.89
PEP8YJL053W YGL117WP53133 265 aa3.22□□□□□ -1.89
PEP8YJL053W CPR8P53728 308 aa3.22□□□□□ -1.89
PEP8YJL053W YNR029CP53729 429 aaKnown RBP3.22□□□□□ -1.89
PEP8YJL053W UME1Q03010 460 aa3.22□□□□□ -1.89
PEP8YJL053W SEC15P22224 910 aa3.21□□□□□ -1.9
PEP8YJL053W YKR018CP36114 725 aa3.21□□□□□ -1.9
PEP8YJL053W YKR051WP36142 418 aa3.21□□□□□ -1.9
PEP8YJL053W YNL195CP40168 261 aa3.21□□□□□ -1.9
PEP8YJL053W RFX1P48743 811 aa3.21□□□□□ -1.9
PEP8YJL053W YGR237CP50089 785 aa3.21□□□□□ -1.9
PEP8YJL053W AIM14P53109 570 aa3.21□□□□□ -1.9
PEP8YJL053W PCL10P53124 433 aa3.21□□□□□ -1.9
PEP8YJL053W FAP7Q12055 197 aaPredicted RBP3.21□□□□□ -1.9
PEP8YJL053W PRP19P32523 503 aaKnown RBP3.2□□□□□ -1.9
PEP8YJL053W YKR075CP36155 307 aa3.2□□□□□ -1.9
PEP8YJL053W TYS1P36421 394 aaKnown RBP3.2□□□□□ -1.9
PEP8YJL053W TDA3P38758 523 aa3.2□□□□□ -1.9
PEP8YJL053W CKB2P38930 258 aa3.2□□□□□ -1.9
PEP8YJL053W ENP2P48234 707 aaKnown RBP3.2□□□□□ -1.9
PEP8YJL053W DAK1P54838 584 aaKnown RBP3.2□□□□□ -1.9
PEP8YJL053W GPD1Q00055 391 aaKnown RBP3.2□□□□□ -1.9
PEP8YJL053W SCW10Q04951 389 aa3.2□□□□□ -1.9
PEP8YJL053W HEM1P09950 548 aaPredicted RBP3.19□□□□□ -1.9
PEP8YJL053W URE2P23202 354 aaKnown RBP3.19□□□□□ -1.9
PEP8YJL053W SSD1P24276 1250 aaKnown RBP RIP-Chip data3.19□□□□□ -1.9not detected
PEP8YJL053W ELF1P36053 145 aa3.19□□□□□ -1.9
PEP8YJL053W MAL31P38156 614 aa3.19□□□□□ -1.9
PEP8YJL053W APD1P38281 316 aa3.19□□□□□ -1.9
PEP8YJL053W UBP12P39538 1254 aa3.19□□□□□ -1.9
PEP8YJL053W YIL077CP40508 320 aa3.19□□□□□ -1.9
PEP8YJL053W RET2P43621 546 aa3.19□□□□□ -1.9
PEP8YJL053W YGR153WP48238 217 aa3.19□□□□□ -1.9
PEP8YJL053W NDD1Q08887 554 aa3.19□□□□□ -1.9
PEP8YJL053W GRX4P32642 244 aa3.18□□□□□ -1.9
PEP8YJL053W YEN1P40028 759 aa3.18□□□□□ -1.9
PEP8YJL053W GID8P40208 455 aa3.18□□□□□ -1.9
PEP8YJL053W GZF3P42944 551 aaKnown RBP3.18□□□□□ -1.9
PEP8YJL053W YJR096WP47137 282 aa3.18□□□□□ -1.9
PEP8YJL053W LEE1Q02799 301 aaKnown RBP3.18□□□□□ -1.9
PEP8YJL053W RSC9Q03124 581 aa3.18□□□□□ -1.9
PEP8YJL053W MTQ2Q03920 221 aaPredicted RBP3.18□□□□□ -1.9
PEP8YJL053W YTM1Q12024 460 aaPredicted RBP3.18□□□□□ -1.9
PEP8YJL053W YPR089WO13585 888 aa3.17□□□□□ -1.9
PEP8YJL053W SSB1P11484 613 aaKnown RBP3.17□□□□□ -1.9
PEP8YJL053W SEC6P32844 805 aa3.17□□□□□ -1.9
PEP8YJL053W APN2P38207 520 aa3.17□□□□□ -1.9
PEP8YJL053W SSB2P40150 613 aaKnown RBP3.17□□□□□ -1.9
PEP8YJL053W YJR039WP47107 1121 aa3.17□□□□□ -1.9
PEP8YJL053W ARP4P80428 489 aa3.17□□□□□ -1.9
PEP8YJL053W TRS23Q03784 219 aa3.17□□□□□ -1.9
PEP8YJL053W THI6P41835 540 aa3.16□□□□□ -1.9
PEP8YJL053W SET2P46995 733 aaKnown RBP3.16□□□□□ -1.9
PEP8YJL053W MRPL1Q04599 285 aa3.16□□□□□ -1.9
PEP8YJL053W TRE2Q08693 809 aa3.16□□□□□ -1.9
PEP8YJL053W HER1Q12276 1246 aa3.16□□□□□ -1.9
PEP8YJL053W PMA2P19657 947 aa3.15□□□□□ -1.91
PEP8YJL053W RPC34P32910 317 aa3.15□□□□□ -1.91
PEP8YJL053W MNN4P36044 1178 aa3.15□□□□□ -1.91
PEP8YJL053W DID4P36108 232 aa3.15□□□□□ -1.91
PEP8YJL053W COS111P38308 924 aa3.15□□□□□ -1.91
PEP8YJL053W PIH1P38768 344 aa3.15□□□□□ -1.91
PEP8YJL053W SSZ1P38788 538 aaKnown RBP3.15□□□□□ -1.91
PEP8YJL053W OAF1P39720 1047 aaPredicted RBP3.15□□□□□ -1.91
PEP8YJL053W GPP1P41277 250 aaKnown RBP3.15□□□□□ -1.91
PEP8YJL053W MNN11P46985 422 aaKnown RBP3.15□□□□□ -1.91
PEP8YJL053W YJL043WP47053 257 aa3.15□□□□□ -1.91
PEP8YJL053W SNF12P53628 566 aa3.15□□□□□ -1.91
PEP8YJL053W IDP3P53982 420 aaKnown RBP3.15□□□□□ -1.91
PEP8YJL053W PTA1Q01329 785 aaPredicted RBP3.15□□□□□ -1.91
PEP8YJL053W DCS2Q12123 353 aa3.15□□□□□ -1.91
PEP8YJL053W POM34Q12445 299 aa3.15□□□□□ -1.91
PEP8YJL053W ZPS1Q12512 249 aa3.15□□□□□ -1.91
PEP8YJL053W YAP1P19880 650 aaKnown RBP3.14□□□□□ -1.91
PEP8YJL053W MRC1P25588 1096 aa3.14□□□□□ -1.91
PEP8YJL053W MGM1P32266 881 aa3.14□□□□□ -1.91
PEP8YJL053W GPG1P53130 126 aa3.14□□□□□ -1.91
PEP8YJL053W BRE5P53741 515 aaKnown RBP3.14□□□□□ -1.91
PEP8YJL053W YMR210WQ03649 449 aa3.14□□□□□ -1.91
PEP8YJL053W YFT2Q06676 274 aa3.14□□□□□ -1.91
PEP8YJL053W BUD7Q08754 746 aa3.14□□□□□ -1.91
PEP8YJL053W CRC1Q12289 327 aa3.14□□□□□ -1.91
PEP8YJL053W PAF1P38351 445 aa3.13□□□□□ -1.91
PEP8YJL053W DED81P38707 554 aaKnown RBP3.13□□□□□ -1.91
PEP8YJL053W YHR202WP38887 602 aa3.13□□□□□ -1.91
PEP8YJL053W YHM2Q04013 314 aa3.13□□□□□ -1.91
PEP8YJL053W RMP1Q12530 201 aa3.13□□□□□ -1.91
PEP8YJL053W RPL7AP05737 244 aaKnown RBP3.12□□□□□ -1.91
PEP8YJL053W SEC65P29478 273 aa3.12□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 197.8 ms