RNA–Protein interactions for RNA: YJL029C

VPS53, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS53, Length 2,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS53YJL029C FAA4P47912 694 aaKnown RBP3.76□□□□□ -1.81
VPS53YJL029C ERF2Q06551 359 aa3.76□□□□□ -1.81
VPS53YJL029C SPO75Q07798 868 aa3.76□□□□□ -1.81
VPS53YJL029C FMP25Q08023 583 aa3.76□□□□□ -1.81
VPS53YJL029C TRS33Q99394 268 aa3.76□□□□□ -1.81
VPS53YJL029C HOM2P13663 365 aaKnown RBP3.76□□□□□ -1.81
VPS53YJL029C ATE1P16639 503 aa3.76□□□□□ -1.81
VPS53YJL029C SLY41P22215 453 aa3.76□□□□□ -1.81
VPS53YJL029C PEX2P32800 271 aa3.76□□□□□ -1.81
VPS53YJL029C TYE7P33122 291 aaPredicted RBP3.76□□□□□ -1.81
VPS53YJL029C YET1P35723 206 aa3.76□□□□□ -1.81
VPS53YJL029C TIF5P38431 405 aaKnown RBP3.76□□□□□ -1.81
VPS53YJL029C YIL161WP40449 235 aaKnown RBP3.76□□□□□ -1.81
VPS53YJL029C ZAP1P47043 880 aa3.76□□□□□ -1.81
VPS53YJL029C UBP3Q01477 912 aaKnown RBP RIP-Chip data3.76□□□□□ -1.81not detected
VPS53YJL029C ARO80Q04052 950 aa3.76□□□□□ -1.81
VPS53YJL029C TMN2Q04562 672 aa3.76□□□□□ -1.81
VPS53YJL029C LCB4Q12246 624 aa3.76□□□□□ -1.81
VPS53YJL029C CET1O13297 549 aaPredicted RBP3.75□□□□□ -1.81
VPS53YJL029C CDC33P07260 213 aaKnown RBP3.75□□□□□ -1.81
VPS53YJL029C PUT4P15380 627 aa3.75□□□□□ -1.81
VPS53YJL029C TRM1P15565 570 aaKnown RBP3.75□□□□□ -1.81
VPS53YJL029C FUI1P38196 639 aa3.75□□□□□ -1.81
VPS53YJL029C YTA12P40341 825 aa3.75□□□□□ -1.81
VPS53YJL029C COP1P53622 1201 aaKnown RBP3.75□□□□□ -1.81
VPS53YJL029C MTD1Q02046 320 aaKnown RBP3.75□□□□□ -1.81
VPS53YJL029C TAF9Q05027 157 aa3.75□□□□□ -1.81
VPS53YJL029C MEX67Q99257 599 aaKnown RBP3.75□□□□□ -1.81
VPS53YJL029C CCP1P00431 361 aa3.75□□□□□ -1.81
VPS53YJL029C YPK1P12688 680 aaKnown RBP3.75□□□□□ -1.81
VPS53YJL029C SGE1P33335 543 aa3.75□□□□□ -1.81
VPS53YJL029C PSY4P38193 441 aa3.75□□□□□ -1.81
VPS53YJL029C SIF2P38262 535 aa3.75□□□□□ -1.81
VPS53YJL029C SMC2P38989 1170 aaKnown RBP3.75□□□□□ -1.81
VPS53YJL029C AVT2P39981 480 aa3.75□□□□□ -1.81
VPS53YJL029C DOT6P40059 670 aaKnown RBP3.75□□□□□ -1.81
VPS53YJL029C CHS6P40955 746 aa3.75□□□□□ -1.81
VPS53YJL029C RTT101P47050 842 aa3.75□□□□□ -1.81
VPS53YJL029C PEX31P53203 462 aa3.75□□□□□ -1.81
VPS53YJL029C ECM38Q05902 660 aaPredicted RBP3.75□□□□□ -1.81
VPS53YJL029C RCL1Q08096 367 aaPredicted RBP3.75□□□□□ -1.81
VPS53YJL029C DIS3Q08162 1001 aaKnown RBP3.75□□□□□ -1.81
VPS53YJL029C MDM38Q08179 573 aa3.75□□□□□ -1.81
VPS53YJL029C NEW1Q08972 1196 aaKnown RBP3.75□□□□□ -1.81
VPS53YJL029C VPS54Q12071 889 aa3.75□□□□□ -1.81
VPS53YJL029C SVS1Q12254 260 aa3.75□□□□□ -1.81
VPS53YJL029C YOL098CQ12496 1037 aa3.75□□□□□ -1.81
VPS53YJL029C RPS14AP06367 137 aaKnown RBP3.74□□□□□ -1.81
VPS53YJL029C CYC8P14922 966 aa3.74□□□□□ -1.81
VPS53YJL029C PHO13P19881 312 aa3.74□□□□□ -1.81
VPS53YJL029C DAL2P25335 343 aa3.74□□□□□ -1.81
VPS53YJL029C LRE1P25579 583 aaKnown RBP3.74□□□□□ -1.81
VPS53YJL029C IME2P32581 645 aa3.74□□□□□ -1.81
VPS53YJL029C TDA3P38758 523 aa3.74□□□□□ -1.81
VPS53YJL029C ERP5P38819 212 aa3.74□□□□□ -1.81
VPS53YJL029C NMD3P38861 518 aaKnown RBP3.74□□□□□ -1.81
VPS53YJL029C PMC1P38929 1173 aaPredicted RBP3.74□□□□□ -1.81
VPS53YJL029C RPS14BP39516 138 aaKnown RBP3.74□□□□□ -1.81
VPS53YJL029C VFA1P40080 203 aa3.74□□□□□ -1.81
VPS53YJL029C AIR1P40507 360 aaKnown RBP3.74□□□□□ -1.81
VPS53YJL029C PFD1P46988 109 aa3.74□□□□□ -1.81
VPS53YJL029C GPD1Q00055 391 aaKnown RBP3.74□□□□□ -1.81
VPS53YJL029C SYH1Q02875 849 aaKnown RBP3.74□□□□□ -1.81
VPS53YJL029C HED1Q03937 162 aa3.74□□□□□ -1.81
VPS53YJL029C RTN1Q04947 295 aaKnown RBP3.74□□□□□ -1.81
VPS53YJL029C HRD3Q05787 833 aa3.74□□□□□ -1.81
VPS53YJL029C GRX8Q05926 109 aa3.74□□□□□ -1.81
VPS53YJL029C PMT7Q06644 662 aa3.74□□□□□ -1.81
VPS53YJL029C YCG1Q06680 1035 aa3.74□□□□□ -1.81
VPS53YJL029C OPY2Q06810 360 aa3.74□□□□□ -1.81
VPS53YJL029C MCM16Q12262 181 aa3.74□□□□□ -1.81
VPS53YJL029C ADE3P07245 946 aaKnown RBP3.73□□□□□ -1.81
VPS53YJL029C SEC23P15303 768 aaKnown RBP3.73□□□□□ -1.81
VPS53YJL029C KIN3P22209 435 aa3.73□□□□□ -1.81
VPS53YJL029C PDC6P26263 563 aaKnown RBP3.73□□□□□ -1.81
VPS53YJL029C DAL1P32375 460 aa3.73□□□□□ -1.81
VPS53YJL029C SPC110P32380 944 aa3.73□□□□□ -1.81
VPS53YJL029C CDC11P32458 415 aa3.73□□□□□ -1.81
VPS53YJL029C NIP100P33420 868 aa3.73□□□□□ -1.81
VPS53YJL029C MPE1P35728 441 aaKnown RBP3.73□□□□□ -1.81
VPS53YJL029C TRZ1P36159 838 aaPredicted RBP3.73□□□□□ -1.81
VPS53YJL029C ABZ1P37254 787 aaPredicted RBP3.73□□□□□ -1.81
VPS53YJL029C YBR053CP38235 358 aa3.73□□□□□ -1.81
VPS53YJL029C HEM14P40012 539 aa3.73□□□□□ -1.81
VPS53YJL029C TMA108P40462 946 aa3.73□□□□□ -1.81
VPS53YJL029C CDC1P40986 491 aa3.73□□□□□ -1.81
VPS53YJL029C FLC3P53121 802 aa3.73□□□□□ -1.81
VPS53YJL029C GCN5Q03330 439 aa3.73□□□□□ -1.81
VPS53YJL029C CEF1Q03654 590 aaPredicted RBP3.73□□□□□ -1.81
VPS53YJL029C YHM2Q04013 314 aa3.73□□□□□ -1.81
VPS53YJL029C SEG1Q04279 960 aa3.73□□□□□ -1.81
VPS53YJL029C VMS1Q04311 632 aaKnown RBP3.73□□□□□ -1.81
VPS53YJL029C AGE1Q04412 482 aa3.73□□□□□ -1.81
VPS53YJL029C MFB1Q04922 465 aa3.73□□□□□ -1.81
VPS53YJL029C DDC1Q08949 612 aa3.73□□□□□ -1.81
VPS53YJL029C APL5Q08951 932 aaKnown RBP3.73□□□□□ -1.81
VPS53YJL029C PYC1P11154 1178 aaKnown RBP3.73□□□□□ -1.81
VPS53YJL029C ECM32P32644 1121 aaKnown RBP3.73□□□□□ -1.81
VPS53YJL029C RPC25P35718 212 aa3.73□□□□□ -1.81
VPS53YJL029C ARL1P38116 183 aaKnown RBP3.73□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 123.8 ms