RNA–Protein interactions for RNA: YJL001W

PRE3, Transcript of Beta 1 subunit of the 20S proteasome, yeastyeast

Gene PRE3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE3YJL001W SIF2P38262 535 aa6.75□□□□□ -1.33
PRE3YJL001W YHR054CP38780 354 aa6.75□□□□□ -1.33
PRE3YJL001W FMO1P38866 432 aa6.75□□□□□ -1.33
PRE3YJL001W PRK1P40494 810 aa6.75□□□□□ -1.33
PRE3YJL001W SCD6P45978 349 aaKnown RBP RIP-Chip data6.75□□□□□ -1.33 RIP-Chip
PRE3YJL001W YJR124CP47159 448 aa6.75□□□□□ -1.33
PRE3YJL001W ENT3P47160 408 aa6.75□□□□□ -1.33
PRE3YJL001W PSP1P50896 841 aaKnown RBP6.75□□□□□ -1.33
PRE3YJL001W YGL140CP53120 1219 aa6.75□□□□□ -1.33
PRE3YJL001W CDD1Q06549 142 aa6.75□□□□□ -1.33
PRE3YJL001W TMA46Q12000 345 aaKnown RBP6.75□□□□□ -1.33
PRE3YJL001W TAF13P11747 167 aa6.74□□□□□ -1.33
PRE3YJL001W VPS3P23643 1011 aa6.74□□□□□ -1.33
PRE3YJL001W YKL091CP33324 310 aaKnown RBP6.74□□□□□ -1.33
PRE3YJL001W TFA2P36145 328 aa6.74□□□□□ -1.33
PRE3YJL001W UBP13P38187 747 aa6.74□□□□□ -1.33
PRE3YJL001W MED6P38782 295 aa6.74□□□□□ -1.33
PRE3YJL001W NMD3P38861 518 aaKnown RBP6.74□□□□□ -1.33
PRE3YJL001W GYP8P43570 497 aa6.74□□□□□ -1.33
PRE3YJL001W UBA2P52488 636 aa6.74□□□□□ -1.33
PRE3YJL001W CUE3P53137 624 aaKnown RBP6.74□□□□□ -1.33
PRE3YJL001W RTC4P53850 401 aa6.74□□□□□ -1.33
PRE3YJL001W TY1A-DR2Q03964 440 aaKnown RBP6.74□□□□□ -1.33
PRE3YJL001W HPF1Q05164 967 aa6.74□□□□□ -1.33
PRE3YJL001W PSK2Q08217 1101 aa6.74□□□□□ -1.33
PRE3YJL001W FOB1O13329 566 aa6.73□□□□□ -1.33
PRE3YJL001W MRP10O75012 95 aa6.73□□□□□ -1.33
PRE3YJL001W ASP3-2P0CX77 362 aa6.73□□□□□ -1.33
PRE3YJL001W ASP3-3P0CX78 362 aa6.73□□□□□ -1.33
PRE3YJL001W ASP3-4P0CX79 362 aa6.73□□□□□ -1.33
PRE3YJL001W ASP3-1P0CZ17 362 aa6.73□□□□□ -1.33
PRE3YJL001W PCK1P10963 549 aa6.73□□□□□ -1.33
PRE3YJL001W SEC23P15303 768 aaKnown RBP6.73□□□□□ -1.33
PRE3YJL001W KIP1P28742 1111 aa6.73□□□□□ -1.33
PRE3YJL001W YEL1P34225 687 aa6.73□□□□□ -1.33
PRE3YJL001W YKL077WP36081 392 aa6.73□□□□□ -1.33
PRE3YJL001W AMN1P38285 549 aaPredicted RBP6.73□□□□□ -1.33
PRE3YJL001W NEM1P38757 446 aa6.73□□□□□ -1.33
PRE3YJL001W VTC2P43585 828 aa6.73□□□□□ -1.33
PRE3YJL001W CCM1P48237 864 aaPredicted RBP6.73□□□□□ -1.33
PRE3YJL001W HER2Q03557 464 aa6.73□□□□□ -1.33
PRE3YJL001W OPI10Q08202 246 aa6.73□□□□□ -1.33
PRE3YJL001W SOG2Q08817 791 aa6.73□□□□□ -1.33
PRE3YJL001W YPQ1Q12010 308 aa6.73□□□□□ -1.33
PRE3YJL001W HRT3Q12347 344 aa6.73□□□□□ -1.33
PRE3YJL001W MPD2Q99316 277 aa6.73□□□□□ -1.33
PRE3YJL001W CCP1P00431 361 aa6.72□□□□□ -1.33
PRE3YJL001W RNR2P09938 399 aaKnown RBP6.72□□□□□ -1.33
PRE3YJL001W MSH2P25847 964 aa6.72□□□□□ -1.33
PRE3YJL001W URA1P28272 314 aaPredicted RBP6.72□□□□□ -1.33
PRE3YJL001W RAD16P31244 790 aa6.72□□□□□ -1.33
PRE3YJL001W RFC5P38251 354 aa6.72□□□□□ -1.33
PRE3YJL001W RGD1P38339 666 aa6.72□□□□□ -1.33
PRE3YJL001W CEM1P39525 442 aa6.72□□□□□ -1.33
PRE3YJL001W YNR065CP53751 1116 aa6.72□□□□□ -1.33
PRE3YJL001W NOP13P53883 403 aaKnown RBP RIP-Chip data6.72□□□□□ -1.33not detected
PRE3YJL001W SEC5P89102 971 aa6.72□□□□□ -1.33
PRE3YJL001W TIF35Q04067 274 aaKnown RBP6.72□□□□□ -1.33
PRE3YJL001W TDA5Q06417 326 aaKnown RBP6.72□□□□□ -1.33
PRE3YJL001W BSP1Q06604 576 aa6.72□□□□□ -1.33
PRE3YJL001W HDA2Q06629 674 aa6.72□□□□□ -1.33
PRE3YJL001W ELG1Q12050 791 aa6.72□□□□□ -1.33
PRE3YJL001W FAL1Q12099 399 aaKnown RBP6.72□□□□□ -1.33
PRE3YJL001W SSB1P11484 613 aaKnown RBP6.71□□□□□ -1.34
PRE3YJL001W MTF1P14908 341 aaKnown RBP6.71□□□□□ -1.34
PRE3YJL001W PPH22P23595 377 aa6.71□□□□□ -1.34
PRE3YJL001W MCM3P24279 971 aaKnown RBP6.71□□□□□ -1.34
PRE3YJL001W YKR051WP36142 418 aa6.71□□□□□ -1.34
PRE3YJL001W PPS1P38148 807 aa6.71□□□□□ -1.34
PRE3YJL001W NPP2P39997 493 aa6.71□□□□□ -1.34
PRE3YJL001W SSB2P40150 613 aaKnown RBP6.71□□□□□ -1.34
PRE3YJL001W IES1P43579 692 aa6.71□□□□□ -1.34
PRE3YJL001W VPS25P47142 202 aa6.71□□□□□ -1.34
PRE3YJL001W GNP1P48813 663 aa6.71□□□□□ -1.34
PRE3YJL001W UTP8P53276 713 aaKnown RBP6.71□□□□□ -1.34
PRE3YJL001W FAR11P53917 953 aa6.71□□□□□ -1.34
PRE3YJL001W UTP14Q04500 899 aaKnown RBP6.71□□□□□ -1.34
PRE3YJL001W SYT1Q06836 1226 aa6.71□□□□□ -1.34
PRE3YJL001W YPL277CQ08989 487 aa6.71□□□□□ -1.34
PRE3YJL001W SGT2Q12118 346 aaKnown RBP6.71□□□□□ -1.34
PRE3YJL001W YPL150WQ12152 901 aa6.71□□□□□ -1.34
PRE3YJL001W CET1O13297 549 aaPredicted RBP6.7□□□□□ -1.34
PRE3YJL001W CPA2P03965 1118 aaKnown RBP6.7□□□□□ -1.34
PRE3YJL001W PHO8P11491 566 aa6.7□□□□□ -1.34
PRE3YJL001W PGI1P12709 554 aaKnown RBP6.7□□□□□ -1.34
PRE3YJL001W BAS1P22035 811 aa6.7□□□□□ -1.34
PRE3YJL001W YBR056WP38081 501 aa6.7□□□□□ -1.34
PRE3YJL001W AGP2P38090 596 aa6.7□□□□□ -1.34
PRE3YJL001W EXO5P38289 585 aa6.7□□□□□ -1.34
PRE3YJL001W BTT1P40314 149 aaPredicted RBP6.7□□□□□ -1.34
PRE3YJL001W CHS6P40955 746 aa6.7□□□□□ -1.34
PRE3YJL001W OSW7P43611 510 aa6.7□□□□□ -1.34
PRE3YJL001W LYS5P50113 272 aa6.7□□□□□ -1.34
PRE3YJL001W PIL1P53252 339 aaKnown RBP6.7□□□□□ -1.34
PRE3YJL001W HIS4P00815 799 aaKnown RBP6.69□□□□□ -1.34
PRE3YJL001W HTS1P07263 546 aaKnown RBP6.69□□□□□ -1.34
PRE3YJL001W HEM13P11353 328 aaKnown RBP6.69□□□□□ -1.34
PRE3YJL001W VMA4P22203 233 aaKnown RBP6.69□□□□□ -1.34
PRE3YJL001W SPF1P39986 1215 aaKnown RBP6.69□□□□□ -1.34
PRE3YJL001W NEO1P40527 1151 aa6.69□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 67.9 ms