RNA–Protein interactions for RNA: YHR004C

NEM1, Transcript of Probable catalytic subunit of Nem1p-Spo7p phosphatase holoenzyme, yeast

Gene NEM1, Length 1,341 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NEM1	YHR004C	CEF1	Q03654	590 aa	Predicted RBP	5.35	□□□□□ -1.55
NEM1	YHR004C	YDL073W	Q07454	984 aa		5.35	□□□□□ -1.55
NEM1	YHR004C	MSH2	P25847	964 aa		5.34	□□□□□ -1.55
NEM1	YHR004C	RPC34	P32910	317 aa		5.34	□□□□□ -1.55
NEM1	YHR004C	PCM1	P38628	557 aa	Known RBP	5.34	□□□□□ -1.55
NEM1	YHR004C	SPC97	P38863	823 aa		5.34	□□□□□ -1.55
NEM1	YHR004C	YMR084W	A2P2R3	262 aa		5.33	□□□□□ -1.56
NEM1	YHR004C	RPL7A	P05737	244 aa	Known RBP	5.33	□□□□□ -1.56
NEM1	YHR004C	IMG2	P25642	146 aa	Predicted RBP	5.33	□□□□□ -1.56
NEM1	YHR004C	ECM32	P32644	1121 aa	Known RBP	5.33	□□□□□ -1.56
NEM1	YHR004C	BEM4	P39011	633 aa		5.33	□□□□□ -1.56
NEM1	YHR004C	PXA1	P41909	870 aa		5.33	□□□□□ -1.56
NEM1	YHR004C	RPL7B	Q12213	244 aa	Known RBP	5.33	□□□□□ -1.56
NEM1	YHR004C	PHO8	P11491	566 aa		5.32	□□□□□ -1.56
NEM1	YHR004C	SFL1	P20134	766 aa		5.32	□□□□□ -1.56
NEM1	YHR004C	YKL091C	P33324	310 aa	Known RBP	5.32	□□□□□ -1.56
NEM1	YHR004C	NUP82	P40368	713 aa		5.32	□□□□□ -1.56
NEM1	YHR004C	PPN1	Q04119	674 aa		5.32	□□□□□ -1.56
NEM1	YHR004C	CPA2	P03965	1118 aa	Known RBP	5.31	□□□□□ -1.56
NEM1	YHR004C	LEU2	P04173	364 aa	Predicted RBP	5.31	□□□□□ -1.56
NEM1	YHR004C	FRE7	Q12333	620 aa		5.31	□□□□□ -1.56
NEM1	YHR004C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	5.3	□□□□□ -1.56	not detected
NEM1	YHR004C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	5.3	□□□□□ -1.56	not detected
NEM1	YHR004C	PPE1	P38796	400 aa		5.3	□□□□□ -1.56
NEM1	YHR004C	JHD1	P40034	492 aa		5.3	□□□□□ -1.56
NEM1	YHR004C	MNT3	P40549	630 aa		5.3	□□□□□ -1.56
NEM1	YHR004C	COQ6	P53318	479 aa		5.3	□□□□□ -1.56
NEM1	YHR004C	GFD1	Q04839	188 aa	Known RBP	5.3	□□□□□ -1.56
NEM1	YHR004C	YPL216W	Q08964	1102 aa		5.3	□□□□□ -1.56
NEM1	YHR004C	YKU70	P32807	602 aa		5.29	□□□□□ -1.56
NEM1	YHR004C	PCI8	P40512	444 aa		5.29	□□□□□ -1.56
NEM1	YHR004C	YIP4	P53093	235 aa		5.29	□□□□□ -1.56
NEM1	YHR004C	SCW4	P53334	386 aa	Known RBP	5.29	□□□□□ -1.56
NEM1	YHR004C	SPO1	P53541	631 aa		5.29	□□□□□ -1.56
NEM1	YHR004C	MFM1	Q02783	413 aa		5.29	□□□□□ -1.56
NEM1	YHR004C	WHI2	P12611	486 aa		5.28	□□□□□ -1.56
NEM1	YHR004C	THI4	P32318	326 aa		5.28	□□□□□ -1.56
NEM1	YHR004C	TMN3	P40071	706 aa		5.28	□□□□□ -1.56
NEM1	YHR004C	BUD6	P41697	788 aa		5.28	□□□□□ -1.56
NEM1	YHR004C	YJL043W	P47053	257 aa		5.28	□□□□□ -1.56
NEM1	YHR004C	FDC1	Q03034	503 aa		5.28	□□□□□ -1.56
NEM1	YHR004C	YLR407W	Q06070	228 aa		5.28	□□□□□ -1.56
NEM1	YHR004C	RCR2	Q03446	210 aa	Known RBP	5.27	□□□□□ -1.57
NEM1	YHR004C	PRS5	Q12265	496 aa	Known RBP	5.27	□□□□□ -1.57
NEM1	YHR004C	CNE1	P27825	502 aa		5.26	□□□□□ -1.57
NEM1	YHR004C	YNL018C	P53976	612 aa		5.26	□□□□□ -1.57
NEM1	YHR004C	EFR3	Q03653	782 aa	Known RBP	5.26	□□□□□ -1.57
NEM1	YHR004C	NEW1	Q08972	1196 aa	Known RBP	5.26	□□□□□ -1.57
NEM1	YHR004C	URE2	P23202	354 aa	Known RBP	5.25	□□□□□ -1.57
NEM1	YHR004C	RSC9	Q03124	581 aa		5.25	□□□□□ -1.57
NEM1	YHR004C	ENT2	Q05785	613 aa		5.25	□□□□□ -1.57
NEM1	YHR004C	TGS1	Q12052	315 aa		5.25	□□□□□ -1.57
NEM1	YHR004C	AQY1	P0CD91	305 aa		5.24	□□□□□ -1.57
NEM1	YHR004C	LOT5	P34234	306 aa		5.24	□□□□□ -1.57
NEM1	YHR004C	ASK1	P35734	292 aa		5.24	□□□□□ -1.57
NEM1	YHR004C	DHR2	P36009	735 aa	Predicted RBP	5.24	□□□□□ -1.57
NEM1	YHR004C	PXL1	P36166	706 aa		5.24	□□□□□ -1.57
NEM1	YHR004C	BUD8	P41698	603 aa		5.24	□□□□□ -1.57
NEM1	YHR004C	IDP3	P53982	420 aa	Known RBP	5.24	□□□□□ -1.57
NEM1	YHR004C	GUD1	Q07729	489 aa		5.24	□□□□□ -1.57
NEM1	YHR004C	IME1	P21190	360 aa		5.23	□□□□□ -1.57
NEM1	YHR004C	LSC1	P53598	329 aa	Known RBP	5.23	□□□□□ -1.57
NEM1	YHR004C	BUD17	P53727	317 aa		5.23	□□□□□ -1.57
NEM1	YHR004C	POB3	Q04636	552 aa	Known RBP	5.23	□□□□□ -1.57
NEM1	YHR004C	MRPL7	P36519	292 aa		5.23	□□□□□ -1.57
NEM1	YHR004C	EXO1	P39875	702 aa		5.23	□□□□□ -1.57
NEM1	YHR004C	OPT1	P40897	799 aa		5.23	□□□□□ -1.57
NEM1	YHR004C	YGR054W	P53235	642 aa	Known RBP	5.22	□□□□□ -1.57
NEM1	YHR004C	HLR1	Q04429	423 aa		5.22	□□□□□ -1.57
NEM1	YHR004C	YPS7	Q06325	596 aa		5.22	□□□□□ -1.57
NEM1	YHR004C	BSP1	Q06604	576 aa		5.22	□□□□□ -1.57
NEM1	YHR004C	GSY2	P27472	705 aa		5.21	□□□□□ -1.58
NEM1	YHR004C	YEL025C	P39991	1188 aa		5.21	□□□□□ -1.58
NEM1	YHR004C	PRE4	P30657	266 aa		5.2	□□□□□ -1.58
NEM1	YHR004C	MRPL1	Q04599	285 aa		5.2	□□□□□ -1.58
NEM1	YHR004C	CRC1	Q12289	327 aa		5.2	□□□□□ -1.58
NEM1	YHR004C	RDL1	Q12305	139 aa	Known RBP	5.2	□□□□□ -1.58
NEM1	YHR004C	YPR089W	O13585	888 aa		5.19	□□□□□ -1.58
NEM1	YHR004C	CAP1	P28495	268 aa	Known RBP	5.19	□□□□□ -1.58
NEM1	YHR004C	BRN1	P38170	754 aa		5.19	□□□□□ -1.58
NEM1	YHR004C	CRG1	P38892	291 aa	RIP-Chip data	5.19	□□□□□ -1.58	not detected
NEM1	YHR004C	BST1	P43571	1029 aa		5.19	□□□□□ -1.58
NEM1	YHR004C	MET13	P53128	600 aa		5.19	□□□□□ -1.58
NEM1	YHR004C	DUN1	P39009	513 aa		5.18	□□□□□ -1.58
NEM1	YHR004C	FTR1	P40088	404 aa		5.18	□□□□□ -1.58
NEM1	YHR004C	YFL015C	P43578	164 aa		5.18	□□□□□ -1.58
NEM1	YHR004C	TAF4	P50105	388 aa		5.18	□□□□□ -1.58
NEM1	YHR004C	NSE5	Q03718	556 aa		5.18	□□□□□ -1.58
NEM1	YHR004C	NUP53	Q03790	475 aa		5.18	□□□□□ -1.58
NEM1	YHR004C	STP4	Q07351	490 aa		5.18	□□□□□ -1.58
NEM1	YHR004C	NTG2	Q08214	380 aa		5.18	□□□□□ -1.58
NEM1	YHR004C	YAP1	P19880	650 aa	Known RBP	5.17	□□□□□ -1.58
NEM1	YHR004C	RNR3	P21672	869 aa	Known RBP	5.17	□□□□□ -1.58
NEM1	YHR004C	TDA3	P38758	523 aa		5.17	□□□□□ -1.58
NEM1	YHR004C	RET2	P43621	546 aa		5.17	□□□□□ -1.58
NEM1	YHR004C	TIM50	Q02776	476 aa		5.17	□□□□□ -1.58
NEM1	YHR004C	AIM41	Q12032	185 aa		5.17	□□□□□ -1.58
NEM1	YHR004C	RPS17A	P02407	136 aa	Known RBP	5.16	□□□□□ -1.58
NEM1	YHR004C	SWI6	P09959	803 aa		5.16	□□□□□ -1.58
NEM1	YHR004C	RPS17B	P14127	136 aa	Known RBP	5.16	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 40.5 ms