RNA–Protein interactions for RNA: YDR439W

LRS4, Transcript of Nucleolar protein that forms a complex with Csm1p, yeast

Gene LRS4, Length 1,044 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LRS4	YDR439W	BNA3	P47039	444 aa	Known RBP	4.15	□□□□□ -1.75
LRS4	YDR439W	YJR039W	P47107	1121 aa		4.15	□□□□□ -1.75
LRS4	YDR439W	NPY1	P53164	384 aa		4.15	□□□□□ -1.75
LRS4	YDR439W	BRE5	P53741	515 aa	Known RBP	4.15	□□□□□ -1.75
LRS4	YDR439W	YHM2	Q04013	314 aa		4.15	□□□□□ -1.75
LRS4	YDR439W	CIA1	Q05583	330 aa		4.15	□□□□□ -1.75
LRS4	YDR439W	RPN7	Q06103	429 aa	Known RBP	4.15	□□□□□ -1.75
LRS4	YDR439W	PEX15	Q08215	383 aa		4.15	□□□□□ -1.75
LRS4	YDR439W	OSW1	Q08692	278 aa		4.15	□□□□□ -1.75
LRS4	YDR439W	CDC26	P14724	124 aa		4.14	□□□□□ -1.75
LRS4	YDR439W	PHO11	P35842	467 aa		4.14	□□□□□ -1.75
LRS4	YDR439W	APL2	P36000	726 aa	Predicted RBP	4.14	□□□□□ -1.75
LRS4	YDR439W	PHO12	P38693	467 aa		4.14	□□□□□ -1.75
LRS4	YDR439W	YHR112C	P38716	378 aa		4.14	□□□□□ -1.75
LRS4	YDR439W	SSZ1	P38788	538 aa	Known RBP	4.14	□□□□□ -1.75
LRS4	YDR439W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
LRS4	YDR439W	EMP65	P40085	556 aa		4.14	□□□□□ -1.75
LRS4	YDR439W	RPT2	P40327	437 aa	Known RBP	4.14	□□□□□ -1.75
LRS4	YDR439W	HIS6	P40545	261 aa		4.14	□□□□□ -1.75
LRS4	YDR439W	QRI7	P43122	407 aa		4.14	□□□□□ -1.75
LRS4	YDR439W	PCL10	P53124	433 aa		4.14	□□□□□ -1.75
LRS4	YDR439W	CNM67	P53865	581 aa	Known RBP	4.14	□□□□□ -1.75
LRS4	YDR439W	TMA64	Q04600	565 aa	Known RBP	4.14	□□□□□ -1.75
LRS4	YDR439W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
LRS4	YDR439W	PTP1	P25044	335 aa		4.13	□□□□□ -1.75
LRS4	YDR439W	DPB3	P27344	201 aa		4.13	□□□□□ -1.75
LRS4	YDR439W	SEC65	P29478	273 aa		4.13	□□□□□ -1.75
LRS4	YDR439W	DBF20	P32328	564 aa		4.13	□□□□□ -1.75
LRS4	YDR439W	YKU70	P32807	602 aa		4.13	□□□□□ -1.75
LRS4	YDR439W	YKL133C	P36066	463 aa		4.13	□□□□□ -1.75
LRS4	YDR439W	MUP3	P38734	546 aa		4.13	□□□□□ -1.75
LRS4	YDR439W	ACA1	P39970	489 aa		4.13	□□□□□ -1.75
LRS4	YDR439W	LTP1	P40347	161 aa		4.13	□□□□□ -1.75
LRS4	YDR439W	SLD3	P53135	668 aa		4.13	□□□□□ -1.75
LRS4	YDR439W	SLK19	Q08581	821 aa	Known RBP	4.13	□□□□□ -1.75
LRS4	YDR439W	MLH3	Q12083	715 aa		4.13	□□□□□ -1.75
LRS4	YDR439W	ADE2	P21264	571 aa	Known RBP	4.12	□□□□□ -1.75
LRS4	YDR439W	RIM4	P38741	713 aa		4.12	□□□□□ -1.75
LRS4	YDR439W	VID27	P40157	782 aa		4.12	□□□□□ -1.75
LRS4	YDR439W	PUS4	P48567	403 aa	Known RBP	4.12	□□□□□ -1.75
LRS4	YDR439W	MOT3	P54785	490 aa	Known RBP	4.12	□□□□□ -1.75
LRS4	YDR439W	ARG5,6	Q01217	863 aa		4.12	□□□□□ -1.75
LRS4	YDR439W	PTA1	Q01329	785 aa	Predicted RBP	4.12	□□□□□ -1.75
LRS4	YDR439W	YML131W	Q03102	365 aa		4.12	□□□□□ -1.75
LRS4	YDR439W	APT2	P36973	181 aa		4.11	□□□□□ -1.75
LRS4	YDR439W	AKL1	P38080	1108 aa	Known RBP	4.11	□□□□□ -1.75
LRS4	YDR439W	MIP6	P38760	659 aa	Known RBP	4.11	□□□□□ -1.75
LRS4	YDR439W	EAF5	P39995	279 aa		4.11	□□□□□ -1.75
LRS4	YDR439W	VID28	P40547	921 aa		4.11	□□□□□ -1.75
LRS4	YDR439W	ERR3	P42222	437 aa		4.11	□□□□□ -1.75
LRS4	YDR439W	MCM21	Q06675	368 aa		4.11	□□□□□ -1.75
LRS4	YDR439W	CLF1	Q12309	687 aa	Predicted RBP	4.11	□□□□□ -1.75
LRS4	YDR439W	YOL114C	Q12322	202 aa		4.11	□□□□□ -1.75
LRS4	YDR439W	GLN4	P13188	809 aa	Known RBP	4.1	□□□□□ -1.75
LRS4	YDR439W	HOP1	P20050	605 aa		4.1	□□□□□ -1.75
LRS4	YDR439W	FUB1	P25659	250 aa		4.1	□□□□□ -1.75
LRS4	YDR439W	HXT4	P32467	576 aa		4.1	□□□□□ -1.75
LRS4	YDR439W	MRS6	P32864	603 aa	Known RBP	4.1	□□□□□ -1.75
LRS4	YDR439W	GMH1	P36125	273 aa		4.1	□□□□□ -1.75
LRS4	YDR439W	YFL052W	P43551	465 aa		4.1	□□□□□ -1.75
LRS4	YDR439W	IES1	P43579	692 aa		4.1	□□□□□ -1.75
LRS4	YDR439W	IRC5	P43610	853 aa		4.1	□□□□□ -1.75
LRS4	YDR439W	RNR4	P49723	345 aa	Known RBP	4.1	□□□□□ -1.75
LRS4	YDR439W	SCS3	P53012	380 aa		4.1	□□□□□ -1.75
LRS4	YDR439W	NOP15	P53927	220 aa	Predicted RBP	4.1	□□□□□ -1.75
LRS4	YDR439W	HLR1	Q04429	423 aa		4.1	□□□□□ -1.75
LRS4	YDR439W	ZRT2	Q12436	422 aa		4.1	□□□□□ -1.75
LRS4	YDR439W	HRP1	Q99383	534 aa	Known RBP	4.1	□□□□□ -1.75
LRS4	YDR439W	THR1	P17423	357 aa	Known RBP	4.09	□□□□□ -1.75
LRS4	YDR439W	YUR1	P26725	428 aa		4.09	□□□□□ -1.75
LRS4	YDR439W	ERP2	P39704	215 aa		4.09	□□□□□ -1.75
LRS4	YDR439W	GID8	P40208	455 aa		4.09	□□□□□ -1.75
LRS4	YDR439W	SAP185	P40856	1058 aa		4.09	□□□□□ -1.75
LRS4	YDR439W	NET1	P47035	1189 aa		4.09	□□□□□ -1.75
LRS4	YDR439W	ORC4	P54791	529 aa		4.09	□□□□□ -1.75
LRS4	YDR439W	YLR407W	Q06070	228 aa		4.09	□□□□□ -1.75
LRS4	YDR439W	COG4	Q06096	861 aa		4.09	□□□□□ -1.75
LRS4	YDR439W	YPS7	Q06325	596 aa		4.09	□□□□□ -1.75
LRS4	YDR439W	PSR2	Q07949	397 aa		4.09	□□□□□ -1.75
LRS4	YDR439W	PGK1	P00560	416 aa	Known RBP	4.08	□□□□□ -1.76
LRS4	YDR439W	ERG11	P10614	530 aa		4.08	□□□□□ -1.76
LRS4	YDR439W	IME1	P21190	360 aa		4.08	□□□□□ -1.76
LRS4	YDR439W	IMG2	P25642	146 aa	Predicted RBP	4.08	□□□□□ -1.76
LRS4	YDR439W	PET309	P32522	965 aa	Predicted RBP	4.08	□□□□□ -1.76
LRS4	YDR439W	PTH2	P34222	208 aa		4.08	□□□□□ -1.76
LRS4	YDR439W	SPC72	P39723	622 aa		4.08	□□□□□ -1.76
LRS4	YDR439W	YIL092W	P40497	633 aa		4.08	□□□□□ -1.76
LRS4	YDR439W	PAP2	P53632	584 aa	Known RBP	4.08	□□□□□ -1.76
LRS4	YDR439W	MTD1	Q02046	320 aa	Known RBP	4.08	□□□□□ -1.76
LRS4	YDR439W	TRS130	Q03660	1102 aa		4.08	□□□□□ -1.76
LRS4	YDR439W	STP4	Q07351	490 aa		4.08	□□□□□ -1.76
LRS4	YDR439W	NGL1	Q08213	363 aa	Known RBP	4.08	□□□□□ -1.76
LRS4	YDR439W	SSP2	Q08646	371 aa		4.08	□□□□□ -1.76
LRS4	YDR439W	CWC2	Q12046	339 aa	Predicted RBP	4.08	□□□□□ -1.76
LRS4	YDR439W	USV1	Q12132	391 aa		4.08	□□□□□ -1.76
LRS4	YDR439W	RGT2	Q12300	763 aa		4.08	□□□□□ -1.76
LRS4	YDR439W	RPS17A	P02407	136 aa	Known RBP	4.07	□□□□□ -1.76
LRS4	YDR439W	RPS17B	P14127	136 aa	Known RBP	4.07	□□□□□ -1.76
LRS4	YDR439W	MSM1	P22438	575 aa		4.07	□□□□□ -1.76
LRS4	YDR439W	ERG6	P25087	383 aa	Known RBP	4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 34.1 ms