RNA–Protein interactions for RNA: YDR425W

SNX41, Transcript of Sorting nexin, yeastyeast

Gene SNX41, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX41YDR425W MYO2P19524 1574 aaKnown RBP2.99□□□□□ -1.93
SNX41YDR425W CFT1Q06632 1357 aaKnown RBP2.99□□□□□ -1.93
SNX41YDR425W HIR3P47171 1648 aa2.99□□□□□ -1.93
SNX41YDR425W RPS17AP02407 136 aaKnown RBP2.99□□□□□ -1.93
SNX41YDR425W RPS17BP14127 136 aaKnown RBP2.99□□□□□ -1.93
SNX41YDR425W KCC4P25389 1037 aa2.99□□□□□ -1.93
SNX41YDR425W PRE4P30657 266 aa2.99□□□□□ -1.93
SNX41YDR425W DID4P36108 232 aa2.99□□□□□ -1.93
SNX41YDR425W YMC2P38087 329 aa2.99□□□□□ -1.93
SNX41YDR425W GPP1P41277 250 aaKnown RBP2.99□□□□□ -1.93
SNX41YDR425W TCB2P48231 1178 aa2.99□□□□□ -1.93
SNX41YDR425W IMO32P53219 342 aa2.99□□□□□ -1.93
SNX41YDR425W SPO1P53541 631 aa2.99□□□□□ -1.93
SNX41YDR425W HLR1Q04429 423 aa2.99□□□□□ -1.93
SNX41YDR425W RKI1Q12189 258 aa2.99□□□□□ -1.93
SNX41YDR425W REV3P14284 1504 aa2.98□□□□□ -1.93
SNX41YDR425W SCC2Q04002 1493 aa2.98□□□□□ -1.93
SNX41YDR425W ACO1P19414 778 aaKnown RBP RIP-Chip data2.98□□□□□ -1.93not detected
SNX41YDR425W SEC15P22224 910 aa2.98□□□□□ -1.93
SNX41YDR425W SEC65P29478 273 aa2.98□□□□□ -1.93
SNX41YDR425W OPY1P38271 328 aa2.98□□□□□ -1.93
SNX41YDR425W YGL081WP53156 320 aa2.98□□□□□ -1.93
SNX41YDR425W FDC1Q03034 503 aa2.98□□□□□ -1.93
SNX41YDR425W BPT1P14772 1559 aa2.97□□□□□ -1.93
SNX41YDR425W PHO5P00635 467 aa2.97□□□□□ -1.93
SNX41YDR425W RPS9BP05755 195 aaKnown RBP2.97□□□□□ -1.93
SNX41YDR425W CDC26P14724 124 aa2.97□□□□□ -1.93
SNX41YDR425W SPO11P23179 398 aa2.97□□□□□ -1.93
SNX41YDR425W MF(ALPHA)2P32435 120 aa2.97□□□□□ -1.93
SNX41YDR425W APL3P38065 1025 aa2.97□□□□□ -1.93
SNX41YDR425W FAT1P38225 669 aa2.97□□□□□ -1.93
SNX41YDR425W FUN12P39730 1002 aaKnown RBP2.97□□□□□ -1.93
SNX41YDR425W TAF4P50105 388 aa2.97□□□□□ -1.93
SNX41YDR425W HFD1Q04458 532 aa2.97□□□□□ -1.93
SNX41YDR425W UFO1Q04511 668 aa2.97□□□□□ -1.93
SNX41YDR425W YNL162W-AQ3E7A8 72 aa2.97□□□□□ -1.93
SNX41YDR425W LAM4P38800 1345 aa2.97□□□□□ -1.93
SNX41YDR425W BUD4P47136 1447 aa2.97□□□□□ -1.93
SNX41YDR425W POL1P13382 1468 aa2.97□□□□□ -1.93
SNX41YDR425W TY1B-DR4Q07793 1604 aa2.97□□□□□ -1.93
SNX41YDR425W RPS21AP0C0V8 87 aaKnown RBP2.96□□□□□ -1.93
SNX41YDR425W YGR237CP50089 785 aa2.96□□□□□ -1.93
SNX41YDR425W NMA2P53204 395 aa2.96□□□□□ -1.93
SNX41YDR425W LGE1Q02796 332 aaKnown RBP2.96□□□□□ -1.93
SNX41YDR425W NUP145P49687 1317 aa2.96□□□□□ -1.93
SNX41YDR425W MTC7P32633 139 aa2.96□□□□□ -1.94
SNX41YDR425W CDS1P38221 457 aa2.96□□□□□ -1.94
SNX41YDR425W DIP5P53388 608 aa2.96□□□□□ -1.94
SNX41YDR425W SPC98P53540 846 aa2.96□□□□□ -1.94
SNX41YDR425W PTA1Q01329 785 aaPredicted RBP2.96□□□□□ -1.94
SNX41YDR425W YDR179W-AQ03983 463 aa2.96□□□□□ -1.94
SNX41YDR425W YHM2Q04013 314 aa2.96□□□□□ -1.94
SNX41YDR425W GLN4P13188 809 aaKnown RBP2.95□□□□□ -1.94
SNX41YDR425W STE4P18851 423 aa2.95□□□□□ -1.94
SNX41YDR425W CRG1P38892 291 aaRIP-Chip data2.95□□□□□ -1.94 RIP-Chip
SNX41YDR425W DUN1P39009 513 aa2.95□□□□□ -1.94
SNX41YDR425W FTR1P40088 404 aa2.95□□□□□ -1.94
SNX41YDR425W PRM2P40534 656 aa2.95□□□□□ -1.94
SNX41YDR425W PMT6P42934 759 aa2.95□□□□□ -1.94
SNX41YDR425W ENP2P48234 707 aaKnown RBP2.95□□□□□ -1.94
SNX41YDR425W EAF7P53911 425 aaKnown RBP2.95□□□□□ -1.94
SNX41YDR425W PAN1P32521 1480 aa2.95□□□□□ -1.94
SNX41YDR425W NUP170P38181 1502 aa2.95□□□□□ -1.94
SNX41YDR425W SRB8P25648 1427 aa2.94□□□□□ -1.94
SNX41YDR425W ELF1P36053 145 aa2.94□□□□□ -1.94
SNX41YDR425W UBP12P39538 1254 aa2.94□□□□□ -1.94
SNX41YDR425W VID28P40547 921 aa2.94□□□□□ -1.94
SNX41YDR425W DUG1P43616 481 aaKnown RBP2.94□□□□□ -1.94
SNX41YDR425W FAP7Q12055 197 aaPredicted RBP2.94□□□□□ -1.94
SNX41YDR425W SSK2P53599 1579 aa2.94□□□□□ -1.94
SNX41YDR425W SIN3P22579 1536 aa2.94□□□□□ -1.94
SNX41YDR425W TSC11P40061 1430 aa2.94□□□□□ -1.94
SNX41YDR425W VPS34P22543 875 aa2.94□□□□□ -1.94
SNX41YDR425W PEX2P32800 271 aa2.94□□□□□ -1.94
SNX41YDR425W MRPL7P36519 292 aa2.94□□□□□ -1.94
SNX41YDR425W ASN1P49089 572 aaKnown RBP2.94□□□□□ -1.94
SNX41YDR425W DAK1P54838 584 aaKnown RBP2.94□□□□□ -1.94
SNX41YDR425W NGL2Q03264 515 aaKnown RBP2.94□□□□□ -1.94
SNX41YDR425W CEF1Q03654 590 aaPredicted RBP2.94□□□□□ -1.94
SNX41YDR425W MRI1Q06489 411 aaKnown RBP2.94□□□□□ -1.94
SNX41YDR425W SMC4Q12267 1418 aa2.93□□□□□ -1.94
SNX41YDR425W LEU2P04173 364 aaPredicted RBP2.93□□□□□ -1.94
SNX41YDR425W TPK2P06245 380 aa2.93□□□□□ -1.94
SNX41YDR425W TUP1P16649 713 aa2.93□□□□□ -1.94
SNX41YDR425W SAT4P25333 603 aaKnown RBP2.93□□□□□ -1.94
SNX41YDR425W UGP1P32861 499 aaKnown RBP2.93□□□□□ -1.94
SNX41YDR425W PMC1P38929 1173 aaPredicted RBP2.93□□□□□ -1.94
SNX41YDR425W TMN3P40071 706 aa2.93□□□□□ -1.94
SNX41YDR425W GPP2P40106 250 aaKnown RBP2.93□□□□□ -1.94
SNX41YDR425W YDL183CP48569 320 aa2.93□□□□□ -1.94
SNX41YDR425W YGL117WP53133 265 aa2.93□□□□□ -1.94
SNX41YDR425W YGR054WP53235 642 aaKnown RBP2.93□□□□□ -1.94
SNX41YDR425W EFR3Q03653 782 aaKnown RBP2.93□□□□□ -1.94
SNX41YDR425W ARR3Q06598 404 aa2.93□□□□□ -1.94
SNX41YDR425W OSW1Q08692 278 aa2.93□□□□□ -1.94
SNX41YDR425W NOP56Q12460 504 aaKnown RBP RIP-Chip data2.93□□□□□ -1.94not detected
SNX41YDR425W THO2P53552 1597 aaKnown RBP2.93□□□□□ -1.94
SNX41YDR425W DNA2P38859 1522 aa2.93□□□□□ -1.94
SNX41YDR425W YLR419WQ06698 1435 aaKnown RBP2.93□□□□□ -1.94
SNX41YDR425W HOP1P20050 605 aa2.92□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 63.7 ms