RNA–Protein interactions for RNA: YDR243C

PRP28, Transcript of RNA helicase in the DEAD-box family, yeastyeast

Gene PRP28, Length 1,767 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP28YDR243C ZPR1P53303 486 aaKnown RBP4.64□□□□□ -1.67
PRP28YDR243C VPS75P53853 264 aa4.64□□□□□ -1.67
PRP28YDR243C SRL4Q03085 281 aa4.64□□□□□ -1.67
PRP28YDR243C MMT1Q03218 510 aa4.64□□□□□ -1.67
PRP28YDR243C HER2Q03557 464 aa4.64□□□□□ -1.67
PRP28YDR243C USA1Q03714 838 aa4.64□□□□□ -1.67
PRP28YDR243C VPS64Q03944 604 aa4.64□□□□□ -1.67
PRP28YDR243C SHE9Q04172 456 aa4.64□□□□□ -1.67
PRP28YDR243C HFD1Q04458 532 aa4.64□□□□□ -1.67
PRP28YDR243C YLR287CQ05881 355 aa4.64□□□□□ -1.67
PRP28YDR243C VHS3Q08438 674 aa4.64□□□□□ -1.67
PRP28YDR243C GET4Q12125 312 aa4.64□□□□□ -1.67
PRP28YDR243C TY1A-DR3Q12441 440 aa4.64□□□□□ -1.67
PRP28YDR243C RMP1Q12530 201 aa4.64□□□□□ -1.67
PRP28YDR243C PDR12Q02785 1511 aa4.64□□□□□ -1.67
PRP28YDR243C RPO41P13433 1351 aaKnown RBP4.64□□□□□ -1.67
PRP28YDR243C KRE5P22023 1365 aa4.64□□□□□ -1.67
PRP28YDR243C RPL19AP0CX82 189 aaKnown RBP4.63□□□□□ -1.67
PRP28YDR243C RPL19BP0CX83 189 aaPredicted RBP4.63□□□□□ -1.67
PRP28YDR243C URE2P23202 354 aaKnown RBP4.63□□□□□ -1.67
PRP28YDR243C VPS3P23643 1011 aa4.63□□□□□ -1.67
PRP28YDR243C RRP43P25359 394 aaPredicted RBP4.63□□□□□ -1.67
PRP28YDR243C RAD27P26793 382 aa4.63□□□□□ -1.67
PRP28YDR243C MVD1P32377 396 aaKnown RBP4.63□□□□□ -1.67
PRP28YDR243C PRP19P32523 503 aaKnown RBP4.63□□□□□ -1.67
PRP28YDR243C SUV3P32580 737 aa4.63□□□□□ -1.67
PRP28YDR243C GYP6P32806 458 aa4.63□□□□□ -1.67
PRP28YDR243C PRX1P34227 261 aaKnown RBP4.63□□□□□ -1.67
PRP28YDR243C YKL050CP35736 922 aa4.63□□□□□ -1.67
PRP28YDR243C SER3P40054 469 aa4.63□□□□□ -1.67
PRP28YDR243C AVT6P40074 448 aa4.63□□□□□ -1.67
PRP28YDR243C YER137CP40083 148 aaKnown RBP4.63□□□□□ -1.67
PRP28YDR243C PDS1P40316 373 aaPredicted RBP4.63□□□□□ -1.67
PRP28YDR243C SPO22P40511 975 aa4.63□□□□□ -1.67
PRP28YDR243C AGE2P40529 298 aa4.63□□□□□ -1.67
PRP28YDR243C MDE1P47095 244 aa4.63□□□□□ -1.67
PRP28YDR243C YGR153WP48238 217 aa4.63□□□□□ -1.67
PRP28YDR243C GOR1P53839 350 aa4.63□□□□□ -1.67
PRP28YDR243C PGA2P53903 129 aa4.63□□□□□ -1.67
PRP28YDR243C YAF9P53930 226 aa4.63□□□□□ -1.67
PRP28YDR243C NAM8Q00539 523 aaKnown RBP4.63□□□□□ -1.67
PRP28YDR243C GLO2Q05584 274 aa4.63□□□□□ -1.67
PRP28YDR243C EAF1Q06337 982 aa4.63□□□□□ -1.67
PRP28YDR243C RPN8Q08723 338 aaKnown RBP4.63□□□□□ -1.67
PRP28YDR243C YDL109CQ12103 647 aa4.63□□□□□ -1.67
PRP28YDR243C TIP41Q12199 356 aa4.63□□□□□ -1.67
PRP28YDR243C IPP1P00817 287 aaKnown RBP4.63□□□□□ -1.67
PRP28YDR243C HAP4P14064 554 aa4.63□□□□□ -1.67
PRP28YDR243C MSD1P15179 658 aaKnown RBP4.63□□□□□ -1.67
PRP28YDR243C GSY2P27472 705 aa4.63□□□□□ -1.67
PRP28YDR243C TYE7P33122 291 aaPredicted RBP4.63□□□□□ -1.67
PRP28YDR243C DOM34P33309 386 aa4.63□□□□□ -1.67
PRP28YDR243C YBR287WP38355 427 aa4.63□□□□□ -1.67
PRP28YDR243C YER130CP39959 443 aa4.63□□□□□ -1.67
PRP28YDR243C RTR1P40084 226 aaPredicted RBP4.63□□□□□ -1.67
PRP28YDR243C JJJ3P47138 172 aa4.63□□□□□ -1.67
PRP28YDR243C MAL11P53048 616 aa4.63□□□□□ -1.67
PRP28YDR243C MRPL50P53724 139 aa4.63□□□□□ -1.67
PRP28YDR243C FCP1Q03254 732 aa4.63□□□□□ -1.67
PRP28YDR243C RPN9Q04062 393 aaKnown RBP4.63□□□□□ -1.67
PRP28YDR243C ARP9Q05123 467 aa4.63□□□□□ -1.67
PRP28YDR243C THI22Q06490 572 aa4.63□□□□□ -1.67
PRP28YDR243C MLC2Q06580 163 aa4.63□□□□□ -1.67
PRP28YDR243C GPI13Q07830 1017 aa4.63□□□□□ -1.67
PRP28YDR243C LOT6Q07923 191 aa4.63□□□□□ -1.67
PRP28YDR243C YEH2Q07950 538 aa4.63□□□□□ -1.67
PRP28YDR243C TAF10Q12030 206 aa4.63□□□□□ -1.67
PRP28YDR243C DAS2Q12084 232 aa4.63□□□□□ -1.67
PRP28YDR243C ATG29Q12092 213 aa4.63□□□□□ -1.67
PRP28YDR243C POM152P39685 1337 aa4.62□□□□□ -1.67
PRP28YDR243C CDC8P00572 216 aa4.62□□□□□ -1.67
PRP28YDR243C LPD1P09624 499 aaKnown RBP4.62□□□□□ -1.67
PRP28YDR243C HOM3P10869 527 aa4.62□□□□□ -1.67
PRP28YDR243C KSS1P14681 368 aa4.62□□□□□ -1.67
PRP28YDR243C PFK2P16862 959 aaKnown RBP RIP-Chip data4.62□□□□□ -1.67not detected
PRP28YDR243C CKA2P19454 339 aa4.62□□□□□ -1.67
PRP28YDR243C SFL1P20134 766 aa4.62□□□□□ -1.67
PRP28YDR243C REC107P21651 314 aa4.62□□□□□ -1.67
PRP28YDR243C MRPL8P22353 238 aa4.62□□□□□ -1.67
PRP28YDR243C PUP1P25043 261 aa4.62□□□□□ -1.67
PRP28YDR243C LCB1P25045 558 aaKnown RBP4.62□□□□□ -1.67
PRP28YDR243C SWI4P25302 1093 aaKnown RBP4.62□□□□□ -1.67
PRP28YDR243C RSC6P25632 483 aa4.62□□□□□ -1.67
PRP28YDR243C KRE2P27809 442 aa4.62□□□□□ -1.67
PRP28YDR243C KRE6P32486 720 aa4.62□□□□□ -1.67
PRP28YDR243C YBL010CP32788 280 aa4.62□□□□□ -1.67
PRP28YDR243C TYS1P36421 394 aaKnown RBP4.62□□□□□ -1.67
PRP28YDR243C ALG14P38242 237 aa4.62□□□□□ -1.67
PRP28YDR243C YBR225WP38321 900 aa4.62□□□□□ -1.67
PRP28YDR243C SWC5P38326 303 aa4.62□□□□□ -1.67
PRP28YDR243C RTC3P38804 111 aaPredicted RBP4.62□□□□□ -1.67
PRP28YDR243C SMF1P38925 575 aa4.62□□□□□ -1.67
PRP28YDR243C OAF1P39720 1047 aaPredicted RBP4.62□□□□□ -1.67
PRP28YDR243C BNA3P47039 444 aaKnown RBP4.62□□□□□ -1.67
PRP28YDR243C ROM1P53046 1155 aa4.62□□□□□ -1.67
PRP28YDR243C ZIP2P53061 704 aa4.62□□□□□ -1.67
PRP28YDR243C ARC35P53731 342 aaKnown RBP4.62□□□□□ -1.67
PRP28YDR243C YNR063WP53749 607 aa4.62□□□□□ -1.67
PRP28YDR243C EGD1Q02642 157 aaKnown RBP4.62□□□□□ -1.67
PRP28YDR243C GCN5Q03330 439 aa4.62□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 52.6 ms