RNA–Protein interactions for RNA: YDR240C

SNU56, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU56, Length 1,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU56YDR240C IES1P43579 692 aa3.67□□□□□ -1.82
SNU56YDR240C PMT3P47190 753 aa3.67□□□□□ -1.82
SNU56YDR240C FMP30Q02883 468 aa3.67□□□□□ -1.82
SNU56YDR240C THI73Q07904 523 aa3.67□□□□□ -1.82
SNU56YDR240C YAP7Q08182 245 aa3.67□□□□□ -1.82
SNU56YDR240C PRE4P30657 266 aa3.67□□□□□ -1.82
SNU56YDR240C YMC1P32331 307 aa3.67□□□□□ -1.82
SNU56YDR240C OAF3P36023 863 aa3.67□□□□□ -1.82
SNU56YDR240C DUN1P39009 513 aa3.67□□□□□ -1.82
SNU56YDR240C ATG36P46983 293 aa3.67□□□□□ -1.82
SNU56YDR240C ENP2P48234 707 aaKnown RBP3.67□□□□□ -1.82
SNU56YDR240C TAF4P50105 388 aa3.67□□□□□ -1.82
SNU56YDR240C CPR8P53728 308 aa3.67□□□□□ -1.82
SNU56YDR240C DNM1P54861 757 aa3.67□□□□□ -1.82
SNU56YDR240C MTQ2Q03920 221 aaPredicted RBP3.67□□□□□ -1.82
SNU56YDR240C HFI1Q12060 488 aa3.67□□□□□ -1.82
SNU56YDR240C PGK1P00560 416 aaKnown RBP3.66□□□□□ -1.82
SNU56YDR240C STE4P18851 423 aa3.66□□□□□ -1.82
SNU56YDR240C SSD1P24276 1250 aaKnown RBP RIP-Chip data3.66□□□□□ -1.82not detected
SNU56YDR240C SEC65P29478 273 aa3.66□□□□□ -1.82
SNU56YDR240C DID4P36108 232 aa3.66□□□□□ -1.82
SNU56YDR240C TYS1P36421 394 aaKnown RBP3.66□□□□□ -1.82
SNU56YDR240C FPR3P38911 411 aaKnown RBP3.66□□□□□ -1.82
SNU56YDR240C HXT6P39003 570 aaKnown RBP3.66□□□□□ -1.82
SNU56YDR240C HXT7P39004 570 aa3.66□□□□□ -1.82
SNU56YDR240C YGL117WP53133 265 aa3.66□□□□□ -1.82
SNU56YDR240C ECM9Q02202 377 aa3.66□□□□□ -1.82
SNU56YDR240C HFD1Q04458 532 aa3.66□□□□□ -1.82
SNU56YDR240C YTM1Q12024 460 aaPredicted RBP3.66□□□□□ -1.82
SNU56YDR240C ACO1P19414 778 aaKnown RBP RIP-Chip data3.65□□□□□ -1.83not detected
SNU56YDR240C TMT1P32643 299 aa3.65□□□□□ -1.83
SNU56YDR240C PIH1P38768 344 aa3.65□□□□□ -1.83
SNU56YDR240C MNN11P46985 422 aaKnown RBP3.65□□□□□ -1.83
SNU56YDR240C BNA3P47039 444 aaKnown RBP3.65□□□□□ -1.83
SNU56YDR240C PTA1Q01329 785 aaPredicted RBP3.65□□□□□ -1.83
SNU56YDR240C UME1Q03010 460 aa3.65□□□□□ -1.83
SNU56YDR240C ARG7Q04728 441 aa3.65□□□□□ -1.83
SNU56YDR240C RPS21BQ3E754 87 aaKnown RBP3.65□□□□□ -1.83
SNU56YDR240C ERG11P10614 530 aa3.64□□□□□ -1.83
SNU56YDR240C DHR2P36009 735 aaPredicted RBP3.64□□□□□ -1.83
SNU56YDR240C TMN3P40071 706 aa3.64□□□□□ -1.83
SNU56YDR240C NUP145P49687 1317 aa3.63□□□□□ -1.83
SNU56YDR240C MRPL7P36519 292 aa3.63□□□□□ -1.83
SNU56YDR240C RIM4P38741 713 aa3.63□□□□□ -1.83
SNU56YDR240C PPE1P38796 400 aa3.63□□□□□ -1.83
SNU56YDR240C CRG1P38892 291 aaRIP-Chip data3.63□□□□□ -1.83not detected
SNU56YDR240C OAF1P39720 1047 aaPredicted RBP3.63□□□□□ -1.83
SNU56YDR240C FTR1P40088 404 aa3.63□□□□□ -1.83
SNU56YDR240C PRM2P40534 656 aa3.63□□□□□ -1.83
SNU56YDR240C YGR054WP53235 642 aaKnown RBP3.63□□□□□ -1.83
SNU56YDR240C EFR3Q03653 782 aaKnown RBP3.63□□□□□ -1.83
SNU56YDR240C YHM2Q04013 314 aa3.63□□□□□ -1.83
SNU56YDR240C YDL073WQ07454 984 aa3.63□□□□□ -1.83
SNU56YDR240C AIM41Q12032 185 aa3.63□□□□□ -1.83
SNU56YDR240C ZPS1Q12512 249 aa3.63□□□□□ -1.83
SNU56YDR240C LEU2P04173 364 aaPredicted RBP3.62□□□□□ -1.83
SNU56YDR240C MF(ALPHA)2P32435 120 aa3.62□□□□□ -1.83
SNU56YDR240C HOT13P36078 116 aa3.62□□□□□ -1.83
SNU56YDR240C GLO1P50107 326 aa3.62□□□□□ -1.83
SNU56YDR240C YIP4P53093 235 aa3.62□□□□□ -1.83
SNU56YDR240C YNR029CP53729 429 aaKnown RBP3.62□□□□□ -1.83
SNU56YDR240C SEC5P89102 971 aa3.62□□□□□ -1.83
SNU56YDR240C TRS23Q03784 219 aa3.62□□□□□ -1.83
SNU56YDR240C IRC3Q06683 689 aa3.62□□□□□ -1.83
SNU56YDR240C YPL216WQ08964 1102 aa3.62□□□□□ -1.83
SNU56YDR240C YGR161W-CQ3E744 92 aa3.62□□□□□ -1.83
SNU56YDR240C TUF1P02992 437 aaKnown RBP3.61□□□□□ -1.83
SNU56YDR240C GLN4P13188 809 aaKnown RBP3.61□□□□□ -1.83
SNU56YDR240C TUP1P16649 713 aa3.61□□□□□ -1.83
SNU56YDR240C PMA2P19657 947 aa3.61□□□□□ -1.83
SNU56YDR240C HOP1P20050 605 aa3.61□□□□□ -1.83
SNU56YDR240C MBR1P23493 339 aa3.61□□□□□ -1.83
SNU56YDR240C PTP1P25044 335 aa3.61□□□□□ -1.83
SNU56YDR240C CDS1P38221 457 aa3.61□□□□□ -1.83
SNU56YDR240C YEL025CP39991 1188 aa3.61□□□□□ -1.83
SNU56YDR240C TAX4P47030 604 aa3.61□□□□□ -1.83
SNU56YDR240C YJR142WP47173 342 aa3.61□□□□□ -1.83
SNU56YDR240C MFM1Q02783 413 aa3.61□□□□□ -1.83
SNU56YDR240C YMR084WA2P2R3 262 aa3.6□□□□□ -1.83
SNU56YDR240C CPA2P03965 1118 aaKnown RBP3.6□□□□□ -1.83
SNU56YDR240C RPL7AP05737 244 aaKnown RBP3.6□□□□□ -1.83
SNU56YDR240C CDC26P14724 124 aa3.6□□□□□ -1.83
SNU56YDR240C APN1P22936 367 aa3.6□□□□□ -1.83
SNU56YDR240C AAD3P25612 363 aa3.6□□□□□ -1.83
SNU56YDR240C CNE1P27825 502 aa3.6□□□□□ -1.83
SNU56YDR240C CAP1P28495 268 aaKnown RBP3.6□□□□□ -1.83
SNU56YDR240C LOT5P34234 306 aa3.6□□□□□ -1.83
SNU56YDR240C VID28P40547 921 aa3.6□□□□□ -1.83
SNU56YDR240C COQ6P53318 479 aa3.6□□□□□ -1.83
SNU56YDR240C YCG1Q06680 1035 aa3.6□□□□□ -1.83
SNU56YDR240C TGS1Q12052 315 aa3.6□□□□□ -1.83
SNU56YDR240C RPL7BQ12213 244 aaKnown RBP3.6□□□□□ -1.83
SNU56YDR240C WHI2P12611 486 aa3.6□□□□□ -1.83
SNU56YDR240C MTC7P32633 139 aa3.6□□□□□ -1.83
SNU56YDR240C FAT1P38225 669 aa3.6□□□□□ -1.83
SNU56YDR240C GPP1P41277 250 aaKnown RBP3.6□□□□□ -1.83
SNU56YDR240C NET1P47035 1189 aa3.6□□□□□ -1.83
SNU56YDR240C GPG1P53130 126 aa3.6□□□□□ -1.83
SNU56YDR240C YNL018CP53976 612 aa3.6□□□□□ -1.83
SNU56YDR240C RPS15Q01855 142 aaKnown RBP3.6□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 20.9 ms