RNA–Protein interactions for RNA: YBR263W

SHM1, Transcript of Mitochondrial serine hydroxymethyltransferase, yeastyeast

Gene SHM1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM1YBR263W CTF3Q12748 733 aa6.04□□□□□ -1.44
SHM1YBR263W YPR117WQ06116 2489 aa6.04□□□□□ -1.44
SHM1YBR263W TUP1P16649 713 aa6.03□□□□□ -1.44
SHM1YBR263W MSB1P21339 1137 aaKnown RBP6.03□□□□□ -1.44
SHM1YBR263W RPB10P22139 70 aa6.03□□□□□ -1.44
SHM1YBR263W ADK2P26364 225 aa6.03□□□□□ -1.44
SHM1YBR263W MCM2P29469 868 aa6.03□□□□□ -1.44
SHM1YBR263W MRPL7P36519 292 aa6.03□□□□□ -1.44
SHM1YBR263W YHR054CP38780 354 aa6.03□□□□□ -1.44
SHM1YBR263W RAD55P38953 406 aa6.03□□□□□ -1.44
SHM1YBR263W BUD16P39988 312 aa6.03□□□□□ -1.44
SHM1YBR263W SDS3P40505 327 aa6.03□□□□□ -1.44
SHM1YBR263W CPR7P47103 393 aa6.03□□□□□ -1.44
SHM1YBR263W YJR124CP47159 448 aa6.03□□□□□ -1.44
SHM1YBR263W TAD1P53065 400 aa6.03□□□□□ -1.44
SHM1YBR263W PNG1Q02890 363 aa6.03□□□□□ -1.44
SHM1YBR263W CEF1Q03654 590 aaPredicted RBP6.03□□□□□ -1.44
SHM1YBR263W PPM1Q04081 328 aa6.03□□□□□ -1.44
SHM1YBR263W ABP140Q08641 628 aaKnown RBP6.03□□□□□ -1.44
SHM1YBR263W LSO1Q3E827 93 aa6.03□□□□□ -1.44
SHM1YBR263W ERS1P17261 260 aa6.02□□□□□ -1.44
SHM1YBR263W RRT12P25381 491 aa6.02□□□□□ -1.44
SHM1YBR263W KIP1P28742 1111 aa6.02□□□□□ -1.44
SHM1YBR263W CBF2P32504 956 aa6.02□□□□□ -1.44
SHM1YBR263W XRS2P33301 854 aa6.02□□□□□ -1.44
SHM1YBR263W RFS1P38234 210 aaKnown RBP6.02□□□□□ -1.44
SHM1YBR263W NEO1P40527 1151 aa6.02□□□□□ -1.44
SHM1YBR263W ZAP1P47043 880 aa6.02□□□□□ -1.44
SHM1YBR263W UME1Q03010 460 aa6.02□□□□□ -1.44
SHM1YBR263W RCR2Q03446 210 aaKnown RBP6.02□□□□□ -1.44
SHM1YBR263W ESC8Q08119 714 aa6.02□□□□□ -1.44
SHM1YBR263W PLP2Q12017 286 aa6.02□□□□□ -1.44
SHM1YBR263W PKH2Q12236 1081 aaKnown RBP6.02□□□□□ -1.44
SHM1YBR263W PRC1P00729 532 aa6.02□□□□□ -1.45
SHM1YBR263W PPR1P07272 904 aaPredicted RBP6.02□□□□□ -1.45
SHM1YBR263W CIT2P08679 460 aa6.02□□□□□ -1.45
SHM1YBR263W COX11P19516 300 aaKnown RBP6.02□□□□□ -1.45
SHM1YBR263W DAL2P25335 343 aa6.02□□□□□ -1.45
SHM1YBR263W SMC1P32908 1225 aa6.02□□□□□ -1.45
SHM1YBR263W NIP100P33420 868 aa6.02□□□□□ -1.45
SHM1YBR263W AGP2P38090 596 aa6.02□□□□□ -1.45
SHM1YBR263W APN2P38207 520 aa6.02□□□□□ -1.45
SHM1YBR263W YHR202WP38887 602 aa6.02□□□□□ -1.45
SHM1YBR263W FMP10P40098 244 aa6.02□□□□□ -1.45
SHM1YBR263W YFL052WP43551 465 aa6.02□□□□□ -1.45
SHM1YBR263W POL31P46957 487 aa6.02□□□□□ -1.45
SHM1YBR263W SMC3P47037 1230 aa6.02□□□□□ -1.45
SHM1YBR263W MCM6P53091 1017 aaKnown RBP6.02□□□□□ -1.45
SHM1YBR263W ESBP6P53918 673 aa6.02□□□□□ -1.45
SHM1YBR263W YLR287CQ05881 355 aa6.02□□□□□ -1.45
SHM1YBR263W HMI1Q12039 706 aa6.02□□□□□ -1.45
SHM1YBR263W ATG9Q12142 997 aa6.02□□□□□ -1.45
SHM1YBR263W RRP6Q12149 733 aaKnown RBP6.02□□□□□ -1.45
SHM1YBR263W GLO4Q12320 285 aa6.02□□□□□ -1.45
SHM1YBR263W GAL10P04397 699 aa6.01□□□□□ -1.45
SHM1YBR263W CHS1P08004 1131 aa6.01□□□□□ -1.45
SHM1YBR263W SPO12P17123 173 aa6.01□□□□□ -1.45
SHM1YBR263W RNR1P21524 888 aaKnown RBP6.01□□□□□ -1.45
SHM1YBR263W GCS1P35197 352 aa6.01□□□□□ -1.45
SHM1YBR263W CSG2P35206 410 aa6.01□□□□□ -1.45
SHM1YBR263W IRS4P36115 615 aaKnown RBP6.01□□□□□ -1.45
SHM1YBR263W CCL1P37366 393 aa6.01□□□□□ -1.45
SHM1YBR263W SAH1P39954 449 aaKnown RBP6.01□□□□□ -1.45
SHM1YBR263W PSY2P40164 858 aa6.01□□□□□ -1.45
SHM1YBR263W ALT1P52893 592 aa6.01□□□□□ -1.45
SHM1YBR263W MET13P53128 600 aa6.01□□□□□ -1.45
SHM1YBR263W STP1Q00947 519 aa6.01□□□□□ -1.45
SHM1YBR263W HAS1Q03532 505 aaKnown RBP6.01□□□□□ -1.45
SHM1YBR263W YPR078CQ06813 372 aa6.01□□□□□ -1.45
SHM1YBR263W APL4Q12028 832 aa6.01□□□□□ -1.45
SHM1YBR263W YPR027CQ12079 277 aa6.01□□□□□ -1.45
SHM1YBR263W AI5_BETAQ9ZZX0 354 aa6.01□□□□□ -1.45
SHM1YBR263W UBR2Q07963 1872 aa6□□□□□ -1.45
SHM1YBR263W HAP2P06774 265 aa6□□□□□ -1.45
SHM1YBR263W SEC21P32074 935 aaKnown RBP6□□□□□ -1.45
SHM1YBR263W MNR2P35724 969 aa6□□□□□ -1.45
SHM1YBR263W TRZ1P36159 838 aaPredicted RBP6□□□□□ -1.45
SHM1YBR263W KAP123P40069 1113 aaKnown RBP6□□□□□ -1.45
SHM1YBR263W MMM1P41800 426 aa6□□□□□ -1.45
SHM1YBR263W IES1P43579 692 aa6□□□□□ -1.45
SHM1YBR263W SPC98P53540 846 aa6□□□□□ -1.45
SHM1YBR263W NOP13P53883 403 aaKnown RBP RIP-Chip data6□□□□□ -1.45not detected
SHM1YBR263W YVH1Q02256 364 aaKnown RBP6□□□□□ -1.45
SHM1YBR263W ECM3Q99252 613 aa6□□□□□ -1.45
SHM1YBR263W TRP2P00899 507 aaKnown RBP5.99□□□□□ -1.45
SHM1YBR263W GAL80P04387 435 aa5.99□□□□□ -1.45
SHM1YBR263W TPK1P06244 397 aa5.99□□□□□ -1.45
SHM1YBR263W CDC33P07260 213 aaKnown RBP5.99□□□□□ -1.45
SHM1YBR263W VPS3P23643 1011 aa5.99□□□□□ -1.45
SHM1YBR263W URK1P27515 501 aa5.99□□□□□ -1.45
SHM1YBR263W PEX2P32800 271 aa5.99□□□□□ -1.45
SHM1YBR263W SEA4P38164 1038 aa5.99□□□□□ -1.45
SHM1YBR263W STB5P38699 743 aa5.99□□□□□ -1.45
SHM1YBR263W SIP5P40210 489 aaKnown RBP5.99□□□□□ -1.45
SHM1YBR263W FAF1P40546 346 aaPredicted RBP5.99□□□□□ -1.45
SHM1YBR263W DRN1P53255 507 aaKnown RBP5.99□□□□□ -1.45
SHM1YBR263W TIF35Q04067 274 aaKnown RBP5.99□□□□□ -1.45
SHM1YBR263W GIC2Q06648 383 aa5.99□□□□□ -1.45
SHM1YBR263W NEW1Q08972 1196 aaKnown RBP5.99□□□□□ -1.45
SHM1YBR263W PYC2P32327 1180 aaKnown RBP5.98□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 114.5 ms