RNA–Protein interactions for RNA: YBL103C

RTG3, Transcript of bHLH/Zip transcription factor for retrograde (RTG) and TOR pathways, yeast

Gene RTG3, Length 1,461 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTG3	YBL103C	RPS21A	P0C0V8	87 aa	Known RBP	5.49	□□□□□ -1.53
RTG3	YBL103C	PRE4	P30657	266 aa		5.49	□□□□□ -1.53
RTG3	YBL103C	ORC2	P32833	620 aa		5.49	□□□□□ -1.53
RTG3	YBL103C	OAF3	P36023	863 aa		5.49	□□□□□ -1.53
RTG3	YBL103C	FAT1	P38225	669 aa		5.49	□□□□□ -1.53
RTG3	YBL103C	PMT3	P47190	753 aa		5.49	□□□□□ -1.53
RTG3	YBL103C	TAF4	P50105	388 aa		5.49	□□□□□ -1.53
RTG3	YBL103C	PPN1	Q04119	674 aa		5.49	□□□□□ -1.53
RTG3	YBL103C	ADE5,7	P07244	802 aa	Known RBP	5.48	□□□□□ -1.53
RTG3	YBL103C	STE4	P18851	423 aa		5.48	□□□□□ -1.53
RTG3	YBL103C	UGP1	P32861	499 aa	Known RBP	5.48	□□□□□ -1.53
RTG3	YBL103C	CRG1	P38892	291 aa	RIP-Chip data	5.48	□□□□□ -1.53	not detected
RTG3	YBL103C	OAF1	P39720	1047 aa	Predicted RBP	5.48	□□□□□ -1.53
RTG3	YBL103C	IES1	P43579	692 aa		5.48	□□□□□ -1.53
RTG3	YBL103C	GPG1	P53130	126 aa		5.48	□□□□□ -1.53
RTG3	YBL103C	TIM50	Q02776	476 aa		5.48	□□□□□ -1.53
RTG3	YBL103C	TRS23	Q03784	219 aa		5.48	□□□□□ -1.53
RTG3	YBL103C	YTM1	Q12024	460 aa	Predicted RBP	5.48	□□□□□ -1.53
RTG3	YBL103C	HFI1	Q12060	488 aa		5.48	□□□□□ -1.53
RTG3	YBL103C	YGR161W-C	Q3E744	92 aa		5.48	□□□□□ -1.53
RTG3	YBL103C	TPK2	P06245	380 aa		5.47	□□□□□ -1.53
RTG3	YBL103C	TUP1	P16649	713 aa		5.47	□□□□□ -1.53
RTG3	YBL103C	FTR1	P40088	404 aa		5.46	□□□□□ -1.53
RTG3	YBL103C	GPP1	P41277	250 aa	Known RBP	5.46	□□□□□ -1.53
RTG3	YBL103C	MNN11	P46985	422 aa	Known RBP	5.46	□□□□□ -1.53
RTG3	YBL103C	HOF1	Q05080	669 aa		5.46	□□□□□ -1.53
RTG3	YBL103C	ULA1	Q12059	462 aa		5.46	□□□□□ -1.53
RTG3	YBL103C	ERG11	P10614	530 aa		5.45	□□□□□ -1.54
RTG3	YBL103C	CDS1	P38221	457 aa		5.45	□□□□□ -1.54
RTG3	YBL103C	PPE1	P38796	400 aa		5.45	□□□□□ -1.54
RTG3	YBL103C	VID28	P40547	921 aa		5.45	□□□□□ -1.54
RTG3	YBL103C	PTA1	Q01329	785 aa	Predicted RBP	5.45	□□□□□ -1.54
RTG3	YBL103C	FDC1	Q03034	503 aa		5.45	□□□□□ -1.54
RTG3	YBL103C	DAK1	P54838	584 aa	Known RBP	5.45	□□□□□ -1.54
RTG3	YBL103C	HFD1	Q04458	532 aa		5.45	□□□□□ -1.54
RTG3	YBL103C	CDC26	P14724	124 aa		5.44	□□□□□ -1.54
RTG3	YBL103C	DID4	P36108	232 aa		5.44	□□□□□ -1.54
RTG3	YBL103C	MRPL7	P36519	292 aa		5.44	□□□□□ -1.54
RTG3	YBL103C	YHR033W	P38690	423 aa		5.44	□□□□□ -1.54
RTG3	YBL103C	PRM2	P40534	656 aa		5.44	□□□□□ -1.54
RTG3	YBL103C	YGR237C	P50089	785 aa		5.44	□□□□□ -1.54
RTG3	YBL103C	NSE5	Q03718	556 aa		5.44	□□□□□ -1.54
RTG3	YBL103C	RIM13	Q03792	727 aa		5.44	□□□□□ -1.54
RTG3	YBL103C	FAP7	Q12055	197 aa	Predicted RBP	5.44	□□□□□ -1.54
RTG3	YBL103C	APM4	Q99186	491 aa		5.44	□□□□□ -1.54
RTG3	YBL103C	FPR3	P38911	411 aa	Known RBP	5.43	□□□□□ -1.54
RTG3	YBL103C	YGL117W	P53133	265 aa		5.43	□□□□□ -1.54
RTG3	YBL103C	YGR054W	P53235	642 aa	Known RBP	5.43	□□□□□ -1.54
RTG3	YBL103C	ARG7	Q04728	441 aa		5.43	□□□□□ -1.54
RTG3	YBL103C	AFT2	Q08957	416 aa		5.43	□□□□□ -1.54
RTG3	YBL103C	SNM1	P40993	198 aa		5.42	□□□□□ -1.54
RTG3	YBL103C	THI6	P41835	540 aa		5.42	□□□□□ -1.54
RTG3	YBL103C	TAX4	P47030	604 aa		5.42	□□□□□ -1.54
RTG3	YBL103C	YIP4	P53093	235 aa		5.42	□□□□□ -1.54
RTG3	YBL103C	MFM1	Q02783	413 aa		5.42	□□□□□ -1.54
RTG3	YBL103C	EFR3	Q03653	782 aa	Known RBP	5.42	□□□□□ -1.54
RTG3	YBL103C	EHT1	P38295	451 aa		5.41	□□□□□ -1.54
RTG3	YBL103C	CPR8	P53728	308 aa		5.41	□□□□□ -1.54
RTG3	YBL103C	HLR1	Q04429	423 aa		5.41	□□□□□ -1.54
RTG3	YBL103C	NUP1	P20676	1076 aa		5.4	□□□□□ -1.54
RTG3	YBL103C	AAD3	P25612	363 aa		5.4	□□□□□ -1.54
RTG3	YBL103C	MF(ALPHA)2	P32435	120 aa		5.4	□□□□□ -1.54
RTG3	YBL103C	MTC7	P32633	139 aa		5.4	□□□□□ -1.54
RTG3	YBL103C	RIM4	P38741	713 aa		5.4	□□□□□ -1.54
RTG3	YBL103C	SEG1	Q04279	960 aa		5.4	□□□□□ -1.54
RTG3	YBL103C	DAL3	P32459	195 aa		5.39	□□□□□ -1.55
RTG3	YBL103C	CEF1	Q03654	590 aa	Predicted RBP	5.39	□□□□□ -1.55
RTG3	YBL103C	YCG1	Q06680	1035 aa		5.39	□□□□□ -1.55
RTG3	YBL103C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	5.39	□□□□□ -1.55	not detected
RTG3	YBL103C	PIH1	P38768	344 aa		5.39	□□□□□ -1.55
RTG3	YBL103C	AIM41	Q12032	185 aa		5.39	□□□□□ -1.55
RTG3	YBL103C	ZPS1	Q12512	249 aa		5.39	□□□□□ -1.55
RTG3	YBL103C	CNE1	P27825	502 aa		5.38	□□□□□ -1.55
RTG3	YBL103C	DGR2	P32330	852 aa		5.38	□□□□□ -1.55
RTG3	YBL103C	YEL025C	P39991	1188 aa		5.38	□□□□□ -1.55
RTG3	YBL103C	YDL183C	P48569	320 aa		5.38	□□□□□ -1.55
RTG3	YBL103C	YPL216W	Q08964	1102 aa		5.38	□□□□□ -1.55
RTG3	YBL103C	PGK1	P00560	416 aa	Known RBP	5.37	□□□□□ -1.55
RTG3	YBL103C	LEU2	P04173	364 aa	Predicted RBP	5.37	□□□□□ -1.55
RTG3	YBL103C	ATP12	P22135	325 aa		5.37	□□□□□ -1.55
RTG3	YBL103C	SER1	P33330	395 aa	Known RBP	5.37	□□□□□ -1.55
RTG3	YBL103C	PIP2	P52960	996 aa		5.37	□□□□□ -1.55
RTG3	YBL103C	BUD17	P53727	317 aa		5.37	□□□□□ -1.55
RTG3	YBL103C	AI5_ALPHA	Q9ZZX1	630 aa		5.37	□□□□□ -1.55
RTG3	YBL103C	HMG2	P12684	1045 aa		5.36	□□□□□ -1.55
RTG3	YBL103C	HXT4	P32467	576 aa		5.36	□□□□□ -1.55
RTG3	YBL103C	DHR2	P36009	735 aa	Predicted RBP	5.36	□□□□□ -1.55
RTG3	YBL103C	HOT13	P36078	116 aa		5.36	□□□□□ -1.55
RTG3	YBL103C	ARR3	Q06598	404 aa		5.36	□□□□□ -1.55
RTG3	YBL103C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	5.36	□□□□□ -1.55	not detected
RTG3	YBL103C	XBP1	P40489	647 aa		5.35	□□□□□ -1.55
RTG3	YBL103C	ENP2	P48234	707 aa	Known RBP	5.35	□□□□□ -1.55
RTG3	YBL103C	YNL018C	P53976	612 aa		5.35	□□□□□ -1.55
RTG3	YBL103C	YDL073W	Q07454	984 aa		5.35	□□□□□ -1.55
RTG3	YBL103C	NGL1	Q08213	363 aa	Known RBP	5.35	□□□□□ -1.55
RTG3	YBL103C	CPA2	P03965	1118 aa	Known RBP	5.34	□□□□□ -1.55
RTG3	YBL103C	PMA2	P19657	947 aa		5.34	□□□□□ -1.55
RTG3	YBL103C	HOP1	P20050	605 aa		5.34	□□□□□ -1.55
RTG3	YBL103C	APN1	P22936	367 aa		5.34	□□□□□ -1.55
RTG3	YBL103C	RMA1	P36001	430 aa	Known RBP	5.34	□□□□□ -1.55

Retrieved 100 of 5,963 RNA–protein pairs in 98.9 ms