RNA–Protein interactions for RNA: YBL024W

NCL1, Transcript of S-adenosyl-L-methionine-dependent tRNA: m5C-methyltransferase, yeast

Gene NCL1, Length 2,055 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NCL1	YBL024W	SAW1	P39735	261 aa		2.67	□□□□□ -1.98
NCL1	YBL024W	YIR042C	P40586	236 aa		2.67	□□□□□ -1.98
NCL1	YBL024W	MAD2	P40958	196 aa		2.67	□□□□□ -1.98
NCL1	YBL024W	ERR3	P42222	437 aa		2.67	□□□□□ -1.98
NCL1	YBL024W	BIT61	P47041	543 aa		2.67	□□□□□ -1.98
NCL1	YBL024W	TAF4	P50105	388 aa		2.67	□□□□□ -1.98
NCL1	YBL024W	MTL1	P53214	551 aa		2.67	□□□□□ -1.98
NCL1	YBL024W	PAP2	P53632	584 aa	Known RBP	2.67	□□□□□ -1.98
NCL1	YBL024W	TEP1	P53916	434 aa		2.67	□□□□□ -1.98
NCL1	YBL024W	GAD1	Q04792	585 aa		2.67	□□□□□ -1.98
NCL1	YBL024W	CIA1	Q05583	330 aa		2.67	□□□□□ -1.98
NCL1	YBL024W	ADY4	Q05955	493 aa		2.67	□□□□□ -1.98
NCL1	YBL024W	ARP7	Q12406	477 aa		2.67	□□□□□ -1.98
NCL1	YBL024W	TGL1	P34163	548 aa		2.67	□□□□□ -1.98
NCL1	YBL024W	PPS1	P38148	807 aa		2.67	□□□□□ -1.98
NCL1	YBL024W	YHR033W	P38690	423 aa		2.67	□□□□□ -1.98
NCL1	YBL024W	YHL017W	P38745	532 aa		2.67	□□□□□ -1.98
NCL1	YBL024W	IMA5	P40884	581 aa		2.67	□□□□□ -1.98
NCL1	YBL024W	PXA1	P41909	870 aa		2.67	□□□□□ -1.98
NCL1	YBL024W	MAD3	P47074	515 aa		2.67	□□□□□ -1.98
NCL1	YBL024W	ENP2	P48234	707 aa	Known RBP	2.67	□□□□□ -1.98
NCL1	YBL024W	MNT2	P53059	558 aa		2.67	□□□□□ -1.98
NCL1	YBL024W	NSE5	Q03718	556 aa		2.67	□□□□□ -1.98
NCL1	YBL024W	TMN2	Q04562	672 aa		2.67	□□□□□ -1.98
NCL1	YBL024W	VBA4	Q04602	768 aa	Known RBP	2.67	□□□□□ -1.98
NCL1	YBL024W	DIN7	Q12086	430 aa		2.67	□□□□□ -1.98
NCL1	YBL024W	PSF3	Q12146	194 aa		2.67	□□□□□ -1.98
NCL1	YBL024W	ERG20	P08524	352 aa	Known RBP	2.66	□□□□□ -1.98
NCL1	YBL024W	PHO81	P17442	1178 aa		2.66	□□□□□ -1.98
NCL1	YBL024W	PRE4	P30657	266 aa		2.66	□□□□□ -1.98
NCL1	YBL024W	RMA1	P36001	430 aa	Known RBP	2.66	□□□□□ -1.98
NCL1	YBL024W	CDS1	P38221	457 aa		2.66	□□□□□ -1.98
NCL1	YBL024W	SAP185	P40856	1058 aa		2.66	□□□□□ -1.98
NCL1	YBL024W	MUK1	Q02866	612 aa		2.66	□□□□□ -1.98
NCL1	YBL024W	VAS1	P07806	1104 aa	Known RBP	2.65	□□□□□ -1.98
NCL1	YBL024W	CBP3	P21560	335 aa		2.65	□□□□□ -1.98
NCL1	YBL024W	MSM1	P22438	575 aa		2.65	□□□□□ -1.98
NCL1	YBL024W	MSH1	P25846	959 aa		2.65	□□□□□ -1.98
NCL1	YBL024W	SDS22	P36047	338 aa		2.65	□□□□□ -1.98
NCL1	YBL024W	SWD1	P39706	426 aa		2.65	□□□□□ -1.98
NCL1	YBL024W	SPC72	P39723	622 aa		2.65	□□□□□ -1.98
NCL1	YBL024W	VID27	P40157	782 aa		2.65	□□□□□ -1.98
NCL1	YBL024W	HOS4	P40480	1083 aa		2.65	□□□□□ -1.98
NCL1	YBL024W	PRM2	P40534	656 aa		2.65	□□□□□ -1.98
NCL1	YBL024W	YNR071C	P53757	342 aa		2.65	□□□□□ -1.98
NCL1	YBL024W	CTK1	Q03957	528 aa	Known RBP	2.65	□□□□□ -1.98
NCL1	YBL024W	IRC10	Q08118	586 aa		2.65	□□□□□ -1.98
NCL1	YBL024W	DBP10	Q12389	995 aa	Known RBP	2.65	□□□□□ -1.98
NCL1	YBL024W	POM34	Q12445	299 aa		2.65	□□□□□ -1.98
NCL1	YBL024W	NKP1	Q12493	238 aa		2.65	□□□□□ -1.98
NCL1	YBL024W	VPS5	Q92331	675 aa		2.65	□□□□□ -1.98
NCL1	YBL024W	LAT1	P12695	482 aa	Known RBP	2.65	□□□□□ -1.99
NCL1	YBL024W	PEX1	P24004	1043 aa		2.65	□□□□□ -1.99
NCL1	YBL024W	HIS7	P33734	552 aa	Known RBP	2.65	□□□□□ -1.99
NCL1	YBL024W	APM3	P38153	483 aa		2.65	□□□□□ -1.99
NCL1	YBL024W	YBR053C	P38235	358 aa		2.65	□□□□□ -1.99
NCL1	YBL024W	FMO1	P38866	432 aa		2.65	□□□□□ -1.99
NCL1	YBL024W	BAP3	P41815	604 aa		2.65	□□□□□ -1.99
NCL1	YBL024W	YJL163C	P46996	555 aa		2.65	□□□□□ -1.99
NCL1	YBL024W	YDL183C	P48569	320 aa		2.65	□□□□□ -1.99
NCL1	YBL024W	PEF1	P53238	335 aa		2.65	□□□□□ -1.99
NCL1	YBL024W	GND2	P53319	492 aa		2.65	□□□□□ -1.99
NCL1	YBL024W	RIA1	P53893	1110 aa		2.65	□□□□□ -1.99
NCL1	YBL024W	YML131W	Q03102	365 aa		2.65	□□□□□ -1.99
NCL1	YBL024W	THI22	Q06490	572 aa		2.65	□□□□□ -1.99
NCL1	YBL024W	PSR2	Q07949	397 aa		2.65	□□□□□ -1.99
NCL1	YBL024W	ATG11	Q12527	1178 aa		2.65	□□□□□ -1.99
NCL1	YBL024W	URA3	P03962	267 aa		2.64	□□□□□ -1.99
NCL1	YBL024W	RPS9B	P05755	195 aa	Known RBP	2.64	□□□□□ -1.99
NCL1	YBL024W	HMG2	P12684	1045 aa		2.64	□□□□□ -1.99
NCL1	YBL024W	CRG1	P38892	291 aa	RIP-Chip data	2.64	□□□□□ -1.99	not detected
NCL1	YBL024W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	2.64	□□□□□ -1.99	not detected
NCL1	YBL024W	SSP120	P39931	234 aa	Known RBP	2.64	□□□□□ -1.99
NCL1	YBL024W	PPN1	Q04119	674 aa		2.64	□□□□□ -1.99
NCL1	YBL024W	TUP1	P16649	713 aa		2.64	□□□□□ -1.99
NCL1	YBL024W	CDC43	P18898	376 aa		2.64	□□□□□ -1.99
NCL1	YBL024W	ARG1	P22768	420 aa		2.64	□□□□□ -1.99
NCL1	YBL024W	PRP22	P24384	1145 aa	Known RBP	2.64	□□□□□ -1.99
NCL1	YBL024W	KIN82	P25341	720 aa		2.64	□□□□□ -1.99
NCL1	YBL024W	CWH43	P25618	953 aa		2.64	□□□□□ -1.99
NCL1	YBL024W	BEM3	P32873	1128 aa		2.64	□□□□□ -1.99
NCL1	YBL024W	MTH1	P35198	433 aa		2.64	□□□□□ -1.99
NCL1	YBL024W	PCL5	P38794	229 aa		2.64	□□□□□ -1.99
NCL1	YBL024W	NUP60	P39705	539 aa		2.64	□□□□□ -1.99
NCL1	YBL024W	FTR1	P40088	404 aa		2.64	□□□□□ -1.99
NCL1	YBL024W	VPS27	P40343	622 aa	Known RBP	2.64	□□□□□ -1.99
NCL1	YBL024W	QRI1	P43123	477 aa	Known RBP	2.64	□□□□□ -1.99
NCL1	YBL024W	SQS1	P53866	767 aa	Known RBP	2.64	□□□□□ -1.99
NCL1	YBL024W	TRS130	Q03660	1102 aa		2.64	□□□□□ -1.99
NCL1	YBL024W	DIA2	Q08496	732 aa	Predicted RBP	2.64	□□□□□ -1.99
NCL1	YBL024W	IRC13	Q08630	104 aa		2.64	□□□□□ -1.99
NCL1	YBL024W	BCS1	P32839	456 aa		2.63	□□□□□ -1.99
NCL1	YBL024W	EHT1	P38295	451 aa		2.63	□□□□□ -1.99
NCL1	YBL024W	COS111	P38308	924 aa		2.63	□□□□□ -1.99
NCL1	YBL024W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	2.63	□□□□□ -1.99	not detected
NCL1	YBL024W	STT3	P39007	718 aa	Known RBP	2.63	□□□□□ -1.99
NCL1	YBL024W	SDS3	P40505	327 aa		2.63	□□□□□ -1.99
NCL1	YBL024W	YIL077C	P40508	320 aa		2.63	□□□□□ -1.99
NCL1	YBL024W	TAH11	P47112	604 aa		2.63	□□□□□ -1.99
NCL1	YBL024W	SPO1	P53541	631 aa		2.63	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms