RNA–Protein interactions for RNA: YBL004W

UTP20, Transcript of Component of the small-subunit (SSU) processome, yeastyeast

Gene UTP20, Length 7,482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UTP20YBL004W AI5_ALPHAQ9ZZX1 630 aa0.87□□□□□ -2.27
UTP20YBL004W SUC2P00724 532 aa0.87□□□□□ -2.27
UTP20YBL004W RPL1AP0CX43 217 aaKnown RBP0.87□□□□□ -2.27
UTP20YBL004W RPL1BP0CX44 217 aaKnown RBP0.87□□□□□ -2.27
UTP20YBL004W PAN5P38787 379 aa0.87□□□□□ -2.27
UTP20YBL004W NUP85P46673 744 aa0.87□□□□□ -2.27
UTP20YBL004W PCL10P53124 433 aa0.87□□□□□ -2.27
UTP20YBL004W TIF35Q04067 274 aaKnown RBP0.87□□□□□ -2.27
UTP20YBL004W SEG1Q04279 960 aa0.87□□□□□ -2.27
UTP20YBL004W RAX1Q08760 435 aa0.87□□□□□ -2.27
UTP20YBL004W YRA1Q12159 226 aaKnown RBP0.87□□□□□ -2.27
UTP20YBL004W SOL3P38858 249 aa0.87□□□□□ -2.27
UTP20YBL004W SCS3P53012 380 aa0.87□□□□□ -2.27
UTP20YBL004W AIM32Q04689 311 aa0.87□□□□□ -2.27
UTP20YBL004W COG4Q06096 861 aa0.87□□□□□ -2.27
UTP20YBL004W SMC5Q08204 1093 aa0.87□□□□□ -2.27
UTP20YBL004W YOR342CQ12182 319 aa0.87□□□□□ -2.27
UTP20YBL004W NDJ1Q12366 352 aa0.87□□□□□ -2.27
UTP20YBL004W FLO9P39712 1322 aa0.86□□□□□ -2.27
UTP20YBL004W YBR056W-AI2HB52 66 aa0.86□□□□□ -2.27
UTP20YBL004W TPK1P06244 397 aa0.86□□□□□ -2.27
UTP20YBL004W SHE3P38272 425 aaKnown RBP0.86□□□□□ -2.27
UTP20YBL004W COS111P38308 924 aa0.86□□□□□ -2.27
UTP20YBL004W GIP4P39732 760 aa0.86□□□□□ -2.27
UTP20YBL004W JEM1P40358 645 aa0.86□□□□□ -2.27
UTP20YBL004W CTR1P49573 406 aa0.86□□□□□ -2.27
UTP20YBL004W ATF2P53296 535 aa0.86□□□□□ -2.27
UTP20YBL004W SNP1Q00916 300 aaPredicted RBP0.86□□□□□ -2.27
UTP20YBL004W YSH1Q06224 779 aaPredicted RBP0.86□□□□□ -2.27
UTP20YBL004W OPI10Q08202 246 aa0.86□□□□□ -2.27
UTP20YBL004W MVD1P32377 396 aaKnown RBP0.86□□□□□ -2.27
UTP20YBL004W YHR020WP38708 688 aaKnown RBP0.86□□□□□ -2.27
UTP20YBL004W SPT8P38915 602 aa0.86□□□□□ -2.27
UTP20YBL004W FHL1P39521 936 aa0.86□□□□□ -2.27
UTP20YBL004W TGL3P40308 642 aa0.86□□□□□ -2.27
UTP20YBL004W YIL161WP40449 235 aaKnown RBP0.86□□□□□ -2.27
UTP20YBL004W BRR2P32639 2163 aaKnown RBP0.86□□□□□ -2.27
UTP20YBL004W VPS8P39702 1274 aa0.86□□□□□ -2.27
UTP20YBL004W TRM9P49957 279 aa0.86□□□□□ -2.27
UTP20YBL004W FDC1Q03034 503 aa0.86□□□□□ -2.27
UTP20YBL004W FUS2Q05670 677 aa0.86□□□□□ -2.27
UTP20YBL004W YDL218WQ07629 317 aa0.86□□□□□ -2.27
UTP20YBL004W YEH1Q07804 573 aa0.86□□□□□ -2.27
UTP20YBL004W RCL1Q08096 367 aaPredicted RBP0.86□□□□□ -2.27
UTP20YBL004W GUP2Q08929 609 aa0.86□□□□□ -2.27
UTP20YBL004W NSI1Q12457 570 aa0.86□□□□□ -2.27
UTP20YBL004W CYT1P07143 309 aa0.86□□□□□ -2.27
UTP20YBL004W PBS2P08018 668 aa0.86□□□□□ -2.27
UTP20YBL004W NUC1P08466 329 aa0.86□□□□□ -2.27
UTP20YBL004W MAS1P10507 462 aa0.86□□□□□ -2.27
UTP20YBL004W CTA1P15202 515 aa0.86□□□□□ -2.27
UTP20YBL004W SNT1P25357 1226 aa0.86□□□□□ -2.27
UTP20YBL004W SLA1P32790 1244 aa0.86□□□□□ -2.27
UTP20YBL004W YMR262WP38430 313 aa0.86□□□□□ -2.27
UTP20YBL004W GYP7P48365 746 aa0.86□□□□□ -2.27
UTP20YBL004W COQ9Q05779 260 aa0.86□□□□□ -2.27
UTP20YBL004W ECM38Q05902 660 aaPredicted RBP0.86□□□□□ -2.27
UTP20YBL004W NOC3Q07896 663 aaPredicted RBP0.86□□□□□ -2.27
UTP20YBL004W UTP20P35194 2493 aaKnown RBP0.86□□□□□ -2.27
UTP20YBL004W OPI1P21957 404 aa0.86□□□□□ -2.27
UTP20YBL004W MRPL36P36531 177 aa0.86□□□□□ -2.27
UTP20YBL004W JHD2P47156 728 aaPredicted RBP0.86□□□□□ -2.27
UTP20YBL004W HOS2P53096 452 aaPredicted RBP0.86□□□□□ -2.27
UTP20YBL004W YMR160WQ03823 816 aa0.86□□□□□ -2.27
UTP20YBL004W TSR4P25040 408 aa0.86□□□□□ -2.27
UTP20YBL004W SGE1P33335 543 aa0.86□□□□□ -2.27
UTP20YBL004W APA2P22108 325 aa0.85□□□□□ -2.27
UTP20YBL004W HOG1P32485 435 aa0.85□□□□□ -2.27
UTP20YBL004W UBP11P36026 717 aa0.85□□□□□ -2.27
UTP20YBL004W GSM1P42950 618 aa0.85□□□□□ -2.27
UTP20YBL004W YOR022CQ12204 715 aa0.85□□□□□ -2.27
UTP20YBL004W POL31P46957 487 aa0.85□□□□□ -2.27
UTP20YBL004W MTO1P53070 669 aa0.85□□□□□ -2.27
UTP20YBL004W PKH3Q03306 898 aaPredicted RBP0.85□□□□□ -2.27
UTP20YBL004W XYL2Q07993 356 aa0.85□□□□□ -2.27
UTP20YBL004W YPQ1Q12010 308 aa0.85□□□□□ -2.27
UTP20YBL004W ILV5P06168 395 aaKnown RBP0.85□□□□□ -2.27
UTP20YBL004W GCD1P09032 578 aaPredicted RBP0.85□□□□□ -2.27
UTP20YBL004W PMT1P33775 817 aa0.85□□□□□ -2.27
UTP20YBL004W CCT3P39077 534 aaKnown RBP0.85□□□□□ -2.27
UTP20YBL004W CAF130P53280 1122 aaPredicted RBP0.85□□□□□ -2.27
UTP20YBL004W FOL1P53848 824 aa0.85□□□□□ -2.27
UTP20YBL004W IPI3P53877 555 aa0.85□□□□□ -2.27
UTP20YBL004W TEP1P53916 434 aa0.85□□□□□ -2.27
UTP20YBL004W KCS1Q12494 1050 aa0.85□□□□□ -2.27
UTP20YBL004W LAA1P39526 2014 aa0.85□□□□□ -2.27
UTP20YBL004W CCH1P50077 2039 aa0.85□□□□□ -2.27
UTP20YBL004W MRP7P12687 371 aa0.85□□□□□ -2.27
UTP20YBL004W RRT12P25381 491 aa0.85□□□□□ -2.27
UTP20YBL004W RPH1P39956 796 aa0.85□□□□□ -2.27
UTP20YBL004W FKH2P41813 862 aa0.85□□□□□ -2.27
UTP20YBL004W ALF1P53904 254 aa0.85□□□□□ -2.27
UTP20YBL004W MIS1P09440 975 aaKnown RBP0.85□□□□□ -2.27
UTP20YBL004W PMT2P31382 759 aa0.85□□□□□ -2.27
UTP20YBL004W PXA2P34230 853 aa0.85□□□□□ -2.27
UTP20YBL004W UBP9P39967 754 aa0.85□□□□□ -2.27
UTP20YBL004W FIS1P40515 155 aa0.85□□□□□ -2.27
UTP20YBL004W PMT3P47190 753 aa0.85□□□□□ -2.27
UTP20YBL004W YPQ2Q06328 317 aa0.85□□□□□ -2.27
UTP20YBL004W YLR049CQ12110 428 aa0.85□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 29.3 ms