RNA–Protein interactions for RNA: snR17a

snR17a, Transcript of Small nucleolar RNA (snoRNA) U3, yeast

Gene snR17a, Length 333 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR17a	snR17a	SND1	Q04007	877 aa		4.07	□□□□□ -1.76
snR17a	snR17a	RAD33	Q04231	177 aa		4.07	□□□□□ -1.76
snR17a	snR17a	UTP14	Q04500	899 aa	Known RBP	4.07	□□□□□ -1.76
snR17a	snR17a	TMN2	Q04562	672 aa		4.07	□□□□□ -1.76
snR17a	snR17a	REH1	Q06709	432 aa		4.07	□□□□□ -1.76
snR17a	snR17a	BDF2	Q07442	638 aa		4.07	□□□□□ -1.76
snR17a	snR17a	HBT1	Q07653	1046 aa	Known RBP	4.07	□□□□□ -1.76
snR17a	snR17a	YOR389W	Q08912	624 aa		4.07	□□□□□ -1.76
snR17a	snR17a	HAL9	Q12180	1030 aa		4.07	□□□□□ -1.76
snR17a	snR17a	TMA7	Q3E764	64 aa	Known RBP	4.07	□□□□□ -1.76
snR17a	snR17a	YOL087C	Q99247	1116 aa		4.07	□□□□□ -1.76
snR17a	snR17a	PRC1	P00729	532 aa		4.06	□□□□□ -1.76
snR17a	snR17a	CDC60	P26637	1090 aa	Known RBP	4.06	□□□□□ -1.76
snR17a	snR17a	YPT53	P36019	220 aa		4.06	□□□□□ -1.76
snR17a	snR17a	PAF1	P38351	445 aa		4.06	□□□□□ -1.76
snR17a	snR17a	FMP10	P40098	244 aa		4.06	□□□□□ -1.76
snR17a	snR17a	NUP82	P40368	713 aa		4.06	□□□□□ -1.76
snR17a	snR17a	GCD10	P41814	478 aa		4.06	□□□□□ -1.76
snR17a	snR17a	VTC2	P43585	828 aa		4.06	□□□□□ -1.76
snR17a	snR17a	SET2	P46995	733 aa	Known RBP	4.06	□□□□□ -1.76
snR17a	snR17a	BNA1	P47096	177 aa		4.06	□□□□□ -1.76
snR17a	snR17a	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
snR17a	snR17a	CWC21	Q03375	135 aa	Known RBP	4.06	□□□□□ -1.76
snR17a	snR17a	TAF8	Q03750	510 aa		4.06	□□□□□ -1.76
snR17a	snR17a	YDR514C	Q04408	483 aa		4.06	□□□□□ -1.76
snR17a	snR17a	ATG38	Q05789	226 aa	Known RBP	4.06	□□□□□ -1.76
snR17a	snR17a	DBP9	Q06218	594 aa	Known RBP	4.06	□□□□□ -1.76
snR17a	snR17a	ARR2	Q06597	130 aa		4.06	□□□□□ -1.76
snR17a	snR17a	RSC3	Q06639	885 aa		4.06	□□□□□ -1.76
snR17a	snR17a	CSR1	Q06705	408 aa	Known RBP	4.06	□□□□□ -1.76
snR17a	snR17a	PGC1	Q08959	321 aa		4.06	□□□□□ -1.76
snR17a	snR17a	FLC1	Q08967	793 aa		4.06	□□□□□ -1.76
snR17a	snR17a	YOR022C	Q12204	715 aa		4.06	□□□□□ -1.76
snR17a	snR17a	TRM13	Q12383	476 aa		4.06	□□□□□ -1.76
snR17a	snR17a	SSK22	P25390	1331 aa	Predicted RBP	4.05	□□□□□ -1.76
snR17a	snR17a	GAL1	P04385	528 aa		4.05	□□□□□ -1.76
snR17a	snR17a	HMG1	P12683	1054 aa		4.05	□□□□□ -1.76
snR17a	snR17a	MSH2	P25847	964 aa		4.05	□□□□□ -1.76
snR17a	snR17a	VMA8	P32610	256 aa	Known RBP	4.05	□□□□□ -1.76
snR17a	snR17a	MRE11	P32829	692 aa		4.05	□□□□□ -1.76
snR17a	snR17a	YHL017W	P38745	532 aa		4.05	□□□□□ -1.76
snR17a	snR17a	RTT105	P40063	208 aa		4.05	□□□□□ -1.76
snR17a	snR17a	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
snR17a	snR17a	SSY5	P47002	699 aa		4.05	□□□□□ -1.76
snR17a	snR17a	YJR120W	P47157	116 aa		4.05	□□□□□ -1.76
snR17a	snR17a	MUP1	P50276	574 aa		4.05	□□□□□ -1.76
snR17a	snR17a	TAD1	P53065	400 aa		4.05	□□□□□ -1.76
snR17a	snR17a	HUL5	P53119	910 aa		4.05	□□□□□ -1.76
snR17a	snR17a	YGR283C	P53336	341 aa	Predicted RBP	4.05	□□□□□ -1.76
snR17a	snR17a	YNR029C	P53729	429 aa	Known RBP	4.05	□□□□□ -1.76
snR17a	snR17a	ALF1	P53904	254 aa		4.05	□□□□□ -1.76
snR17a	snR17a	SPC19	Q03954	165 aa		4.05	□□□□□ -1.76
snR17a	snR17a	YMR111C	Q04461	462 aa	Predicted RBP	4.05	□□□□□ -1.76
snR17a	snR17a	ADY4	Q05955	493 aa		4.05	□□□□□ -1.76
snR17a	snR17a	ATG26	Q06321	1198 aa		4.05	□□□□□ -1.76
snR17a	snR17a	TSR2	Q06672	205 aa	Known RBP	4.05	□□□□□ -1.76
snR17a	snR17a	IRC10	Q08118	586 aa		4.05	□□□□□ -1.76
snR17a	snR17a	LSP1	Q12230	341 aa	Known RBP	4.05	□□□□□ -1.76
snR17a	snR17a	GLE1	Q12315	538 aa		4.05	□□□□□ -1.76
snR17a	snR17a	RRP36	Q12481	300 aa	Predicted RBP	4.05	□□□□□ -1.76
snR17a	snR17a	MPD2	Q99316	277 aa		4.05	□□□□□ -1.76
snR17a	snR17a	SEC3	P33332	1336 aa	Known RBP	4.04	□□□□□ -1.76
snR17a	snR17a	ATP4	P05626	244 aa		4.04	□□□□□ -1.76
snR17a	snR17a	SSH4	P32343	579 aa		4.04	□□□□□ -1.76
snR17a	snR17a	YKL100C	P34248	587 aa		4.04	□□□□□ -1.76
snR17a	snR17a	PPS1	P38148	807 aa		4.04	□□□□□ -1.76
snR17a	snR17a	EXO84	P38261	753 aa		4.04	□□□□□ -1.76
snR17a	snR17a	SAK1	P38990	1142 aa		4.04	□□□□□ -1.76
snR17a	snR17a	RIC1	P40395	1056 aa		4.04	□□□□□ -1.76
snR17a	snR17a	SDS3	P40505	327 aa		4.04	□□□□□ -1.76
snR17a	snR17a	GPP1	P41277	250 aa	Known RBP	4.04	□□□□□ -1.76
snR17a	snR17a	QRI1	P43123	477 aa	Known RBP	4.04	□□□□□ -1.76
snR17a	snR17a	ALG2	P43636	503 aa		4.04	□□□□□ -1.76
snR17a	snR17a	SAE2	P46946	345 aa		4.04	□□□□□ -1.76
snR17a	snR17a	YJL055W	P47044	245 aa		4.04	□□□□□ -1.76
snR17a	snR17a	SHE10	P53075	577 aa		4.04	□□□□□ -1.76
snR17a	snR17a	MUK1	Q02866	612 aa		4.04	□□□□□ -1.76
snR17a	snR17a	NRG1	Q03125	231 aa		4.04	□□□□□ -1.76
snR17a	snR17a	SNZ1	Q03148	297 aa		4.04	□□□□□ -1.76
snR17a	snR17a	MUS81	Q04149	632 aa	Predicted RBP	4.04	□□□□□ -1.76
snR17a	snR17a	CRR1	Q05790	422 aa		4.04	□□□□□ -1.76
snR17a	snR17a	TMA17	Q12513	150 aa		4.04	□□□□□ -1.76
snR17a	snR17a	YLR415C	O13578	112 aa		4.03	□□□□□ -1.76
snR17a	snR17a	PGI1	P12709	554 aa	Known RBP	4.03	□□□□□ -1.76
snR17a	snR17a	KAR3	P17119	729 aa		4.03	□□□□□ -1.76
snR17a	snR17a	PRP4	P20053	465 aa	Known RBP	4.03	□□□□□ -1.76
snR17a	snR17a	MCM3	P24279	971 aa	Known RBP	4.03	□□□□□ -1.76
snR17a	snR17a	DAL80	P26343	269 aa		4.03	□□□□□ -1.76
snR17a	snR17a	NUP120	P35729	1037 aa		4.03	□□□□□ -1.76
snR17a	snR17a	TIF5	P38431	405 aa	Known RBP	4.03	□□□□□ -1.76
snR17a	snR17a	PEX18	P38855	283 aa		4.03	□□□□□ -1.76
snR17a	snR17a	SET5	P38890	526 aa	Known RBP	4.03	□□□□□ -1.76
snR17a	snR17a	ESL1	P40456	1118 aa		4.03	□□□□□ -1.76
snR17a	snR17a	YIR042C	P40586	236 aa		4.03	□□□□□ -1.76
snR17a	snR17a	GYP8	P43570	497 aa		4.03	□□□□□ -1.76
snR17a	snR17a	YGR153W	P48238	217 aa		4.03	□□□□□ -1.76
snR17a	snR17a	SPO1	P53541	631 aa		4.03	□□□□□ -1.76
snR17a	snR17a	RTC4	P53850	401 aa		4.03	□□□□□ -1.76
snR17a	snR17a	LRS4	Q04087	347 aa	Known RBP	4.03	□□□□□ -1.76
snR17a	snR17a	COG8	Q04632	607 aa		4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms