RNA–Protein interactions for RNA: YPL260W

YPL260W, Transcript of Putative substrate of cAMP-dependent protein kinase (PKA), yeast

Gene YPL260W, Length 1,656 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPL260W	YPL260W	PRO2	P54885	456 aa	Known RBP	4.61	□□□□□ -1.67
YPL260W	YPL260W	TAF12	Q03761	539 aa		4.61	□□□□□ -1.67
YPL260W	YPL260W	PIG1	Q06216	648 aa		4.61	□□□□□ -1.67
YPL260W	YPL260W	ISA1	Q07821	250 aa	Predicted RBP	4.61	□□□□□ -1.67
YPL260W	YPL260W	MDM20	Q12387	796 aa	Known RBP	4.61	□□□□□ -1.67
YPL260W	YPL260W	ERP4	Q12450	207 aa		4.61	□□□□□ -1.67
YPL260W	YPL260W	NSI1	Q12457	570 aa		4.61	□□□□□ -1.67
YPL260W	YPL260W	APC1	P53886	1748 aa		4.6	□□□□□ -1.67
YPL260W	YPL260W	YLR278C	Q05854	1341 aa		4.6	□□□□□ -1.67
YPL260W	YPL260W	TEC1	P18412	486 aa		4.6	□□□□□ -1.67
YPL260W	YPL260W	ATP12	P22135	325 aa		4.6	□□□□□ -1.67
YPL260W	YPL260W	SWI4	P25302	1093 aa	Known RBP	4.6	□□□□□ -1.67
YPL260W	YPL260W	KRR1	P25586	316 aa	Predicted RBP	4.6	□□□□□ -1.67
YPL260W	YPL260W	PEP3	P27801	918 aa		4.6	□□□□□ -1.67
YPL260W	YPL260W	ZIP1	P31111	875 aa		4.6	□□□□□ -1.67
YPL260W	YPL260W	HXT1	P32465	570 aa		4.6	□□□□□ -1.67
YPL260W	YPL260W	YBL055C	P34220	418 aa	Predicted RBP	4.6	□□□□□ -1.67
YPL260W	YPL260W	YBR287W	P38355	427 aa		4.6	□□□□□ -1.67
YPL260W	YPL260W	YHR112C	P38716	378 aa		4.6	□□□□□ -1.67
YPL260W	YPL260W	DYS1	P38791	387 aa		4.6	□□□□□ -1.67
YPL260W	YPL260W	MTG2	P38860	518 aa		4.6	□□□□□ -1.67
YPL260W	YPL260W	RCY1	P39531	840 aa		4.6	□□□□□ -1.67
YPL260W	YPL260W	PCI8	P40512	444 aa		4.6	□□□□□ -1.67
YPL260W	YPL260W	FAR7	P43592	221 aa		4.6	□□□□□ -1.67
YPL260W	YPL260W	VMA10	P48836	114 aa	Known RBP	4.6	□□□□□ -1.67
YPL260W	YPL260W	MRPL50	P53724	139 aa		4.6	□□□□□ -1.67
YPL260W	YPL260W	YNR063W	P53749	607 aa		4.6	□□□□□ -1.67
YPL260W	YPL260W	TOF1	P53840	1238 aa		4.6	□□□□□ -1.67
YPL260W	YPL260W	MMT1	Q03218	510 aa		4.6	□□□□□ -1.67
YPL260W	YPL260W	FCP1	Q03254	732 aa		4.6	□□□□□ -1.67
YPL260W	YPL260W	CSI1	Q04368	295 aa		4.6	□□□□□ -1.67
YPL260W	YPL260W	URC2	Q04411	772 aa		4.6	□□□□□ -1.67
YPL260W	YPL260W	SIL1	Q08199	421 aa		4.6	□□□□□ -1.67
YPL260W	YPL260W	RUP1	Q12242	671 aa		4.6	□□□□□ -1.67
YPL260W	YPL260W	SPS1	P08458	490 aa		4.59	□□□□□ -1.67
YPL260W	YPL260W	SEC18	P18759	758 aa	Known RBP	4.59	□□□□□ -1.67
YPL260W	YPL260W	BAS1	P22035	811 aa		4.59	□□□□□ -1.67
YPL260W	YPL260W	PRP22	P24384	1145 aa	Known RBP	4.59	□□□□□ -1.67
YPL260W	YPL260W	HXT3	P32466	567 aa	Known RBP	4.59	□□□□□ -1.67
YPL260W	YPL260W	PRP19	P32523	503 aa	Known RBP	4.59	□□□□□ -1.67
YPL260W	YPL260W	CLG1	P35190	452 aa		4.59	□□□□□ -1.67
YPL260W	YPL260W	SDH8	P38345	138 aa		4.59	□□□□□ -1.67
YPL260W	YPL260W	NPT1	P39683	429 aa	Known RBP	4.59	□□□□□ -1.67
YPL260W	YPL260W	AVT6	P40074	448 aa		4.59	□□□□□ -1.67
YPL260W	YPL260W	SHQ1	P40486	507 aa	Predicted RBP	4.59	□□□□□ -1.67
YPL260W	YPL260W	YJL049W	P47048	450 aa		4.59	□□□□□ -1.67
YPL260W	YPL260W	STB4	P50104	949 aa		4.59	□□□□□ -1.67
YPL260W	YPL260W	PSP1	P50896	841 aa	Known RBP	4.59	□□□□□ -1.67
YPL260W	YPL260W	MIG2	P53035	382 aa		4.59	□□□□□ -1.67
YPL260W	YPL260W	PEF1	P53238	335 aa		4.59	□□□□□ -1.67
YPL260W	YPL260W	HPC2	Q01448	625 aa		4.59	□□□□□ -1.67
YPL260W	YPL260W	MDM1	Q01846	1127 aa		4.59	□□□□□ -1.67
YPL260W	YPL260W	EGD1	Q02642	157 aa	Known RBP	4.59	□□□□□ -1.67
YPL260W	YPL260W	GCN5	Q03330	439 aa		4.59	□□□□□ -1.67
YPL260W	YPL260W	NSE5	Q03718	556 aa		4.59	□□□□□ -1.67
YPL260W	YPL260W	YDR239C	Q03780	787 aa		4.59	□□□□□ -1.67
YPL260W	YPL260W	SHE9	Q04172	456 aa		4.59	□□□□□ -1.67
YPL260W	YPL260W	ADE13	Q05911	482 aa	Known RBP	4.59	□□□□□ -1.67
YPL260W	YPL260W	CRN1	Q06440	651 aa		4.59	□□□□□ -1.67
YPL260W	YPL260W	GIC2	Q06648	383 aa		4.59	□□□□□ -1.67
YPL260W	YPL260W	MLH2	Q07980	695 aa		4.59	□□□□□ -1.67
YPL260W	YPL260W	GAS4	Q08271	471 aa		4.59	□□□□□ -1.67
YPL260W	YPL260W	RPN8	Q08723	338 aa	Known RBP	4.59	□□□□□ -1.67
YPL260W	YPL260W	RIM20	Q12033	661 aa		4.59	□□□□□ -1.67
YPL260W	YPL260W	ATG29	Q12092	213 aa		4.59	□□□□□ -1.67
YPL260W	YPL260W	YDL109C	Q12103	647 aa		4.59	□□□□□ -1.67
YPL260W	YPL260W	CHO2	P05374	869 aa	Known RBP	4.58	□□□□□ -1.68
YPL260W	YPL260W	GPA2	P10823	449 aa		4.58	□□□□□ -1.68
YPL260W	YPL260W	MTF2	P10849	440 aa		4.58	□□□□□ -1.68
YPL260W	YPL260W	POL30	P15873	258 aa	Known RBP	4.58	□□□□□ -1.68
YPL260W	YPL260W	HSP60	P19882	572 aa	Known RBP	4.58	□□□□□ -1.68
YPL260W	YPL260W	DBF2	P22204	572 aa		4.58	□□□□□ -1.68
YPL260W	YPL260W	SPO11	P23179	398 aa		4.58	□□□□□ -1.68
YPL260W	YPL260W	MCM3	P24279	971 aa	Known RBP	4.58	□□□□□ -1.68
YPL260W	YPL260W	PWP2	P25635	923 aa	Known RBP	4.58	□□□□□ -1.68
YPL260W	YPL260W	NAM7	P30771	971 aa	Known RBP	4.58	□□□□□ -1.68
YPL260W	YPL260W	YBL010C	P32788	280 aa		4.58	□□□□□ -1.68
YPL260W	YPL260W	RPT1	P33299	467 aa	Known RBP	4.58	□□□□□ -1.68
YPL260W	YPL260W	PMT1	P33775	817 aa		4.58	□□□□□ -1.68
YPL260W	YPL260W	CCL1	P37366	393 aa		4.58	□□□□□ -1.68
YPL260W	YPL260W	GIP1	P38229	639 aa		4.58	□□□□□ -1.68
YPL260W	YPL260W	RIM11	P38615	370 aa		4.58	□□□□□ -1.68
YPL260W	YPL260W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	RIP-Chip
YPL260W	YPL260W	STN1	P38960	494 aa		4.58	□□□□□ -1.68
YPL260W	YPL260W	CCT2	P39076	527 aa	Known RBP	4.58	□□□□□ -1.68
YPL260W	YPL260W	GEM1	P39722	662 aa		4.58	□□□□□ -1.68
YPL260W	YPL260W	SMX2	P40204	77 aa	Known RBP	4.58	□□□□□ -1.68
YPL260W	YPL260W	FAF1	P40546	346 aa	Predicted RBP	4.58	□□□□□ -1.68
YPL260W	YPL260W	YFL066C	P43538	392 aa		4.58	□□□□□ -1.68
YPL260W	YPL260W	MNN11	P46985	422 aa	Known RBP	4.58	□□□□□ -1.68
YPL260W	YPL260W	LYS4	P49367	693 aa	Predicted RBP	4.58	□□□□□ -1.68
YPL260W	YPL260W	BSC5	P53755	489 aa		4.58	□□□□□ -1.68
YPL260W	YPL260W	VAC7	P53950	1165 aa		4.58	□□□□□ -1.68
YPL260W	YPL260W	ADE16	P54113	591 aa	Known RBP	4.58	□□□□□ -1.68
YPL260W	YPL260W	ALD6	P54115	500 aa	Known RBP	4.58	□□□□□ -1.68
YPL260W	YPL260W	SLU7	Q02775	382 aa	Known RBP	4.58	□□□□□ -1.68
YPL260W	YPL260W	VPS64	Q03944	604 aa		4.58	□□□□□ -1.68
YPL260W	YPL260W	GPI17	Q04080	534 aa		4.58	□□□□□ -1.68
YPL260W	YPL260W	GLO2	Q05584	274 aa		4.58	□□□□□ -1.68
YPL260W	YPL260W	DBP9	Q06218	594 aa	Known RBP	4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms