RNA–Protein interactions for RNA: YPL232W

SSO1, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO1YPL232W FAR11P53917 953 aa5.57□□□□□ -1.52
SSO1YPL232W MTD1Q02046 320 aaKnown RBP5.57□□□□□ -1.52
SSO1YPL232W PSK2Q08217 1101 aa5.57□□□□□ -1.52
SSO1YPL232W GIS3Q12418 502 aa5.57□□□□□ -1.52
SSO1YPL232W DAL7P21826 554 aa5.56□□□□□ -1.52
SSO1YPL232W URA1P28272 314 aaPredicted RBP5.56□□□□□ -1.52
SSO1YPL232W PIN4P34217 668 aaKnown RBP RIP-Chip data5.56□□□□□ -1.52not detected
SSO1YPL232W KAP123P40069 1113 aaKnown RBP5.56□□□□□ -1.52
SSO1YPL232W SUM1P46676 1062 aa5.56□□□□□ -1.52
SSO1YPL232W YJR054WP47114 497 aa5.56□□□□□ -1.52
SSO1YPL232W CTF18P49956 741 aa5.56□□□□□ -1.52
SSO1YPL232W NBP1P52919 319 aaPredicted RBP5.56□□□□□ -1.52
SSO1YPL232W YGR266WP53326 701 aa5.56□□□□□ -1.52
SSO1YPL232W BNI4P53858 892 aa5.56□□□□□ -1.52
SSO1YPL232W CSL4P53859 292 aaPredicted RBP5.56□□□□□ -1.52
SSO1YPL232W PEX13P80667 386 aa5.56□□□□□ -1.52
SSO1YPL232W RTN1Q04947 295 aaKnown RBP5.56□□□□□ -1.52
SSO1YPL232W LCB4Q12246 624 aa5.56□□□□□ -1.52
SSO1YPL232W YIL046W-AQ3E7Z4 54 aa5.56□□□□□ -1.52
SSO1YPL232W UTP20P35194 2493 aaKnown RBP5.56□□□□□ -1.52
SSO1YPL232W HIS4P00815 799 aaKnown RBP5.55□□□□□ -1.52
SSO1YPL232W GAL10P04397 699 aa5.55□□□□□ -1.52
SSO1YPL232W ADE3P07245 946 aaKnown RBP5.55□□□□□ -1.52
SSO1YPL232W RIP1P08067 215 aa5.55□□□□□ -1.52
SSO1YPL232W SNF5P18480 905 aa5.55□□□□□ -1.52
SSO1YPL232W SAT4P25333 603 aaKnown RBP5.55□□□□□ -1.52
SSO1YPL232W PYC2P32327 1180 aaKnown RBP5.55□□□□□ -1.52
SSO1YPL232W HSP78P33416 811 aa5.55□□□□□ -1.52
SSO1YPL232W YBR238CP38330 731 aaKnown RBP5.55□□□□□ -1.52
SSO1YPL232W PTC2P39966 464 aaKnown RBP5.55□□□□□ -1.52
SSO1YPL232W COQ5P49017 307 aa5.55□□□□□ -1.52
SSO1YPL232W MNN10P50108 393 aaKnown RBP5.55□□□□□ -1.52
SSO1YPL232W PYK2P52489 506 aaKnown RBP5.55□□□□□ -1.52
SSO1YPL232W NPY1P53164 384 aa5.55□□□□□ -1.52
SSO1YPL232W MZM1Q03429 123 aaPredicted RBP5.55□□□□□ -1.52
SSO1YPL232W RAD3P06839 778 aa5.54□□□□□ -1.52
SSO1YPL232W PRP9P19736 530 aaKnown RBP5.54□□□□□ -1.52
SSO1YPL232W IME1P21190 360 aa5.54□□□□□ -1.52
SSO1YPL232W RNR1P21524 888 aaKnown RBP5.54□□□□□ -1.52
SSO1YPL232W TRK2P28584 889 aa5.54□□□□□ -1.52
SSO1YPL232W SGE1P33335 543 aa5.54□□□□□ -1.52
SSO1YPL232W SAK1P38990 1142 aa5.54□□□□□ -1.52
SSO1YPL232W GEM1P39722 662 aa5.54□□□□□ -1.52
SSO1YPL232W ERV46P39727 415 aa5.54□□□□□ -1.52
SSO1YPL232W TIF34P40217 347 aaKnown RBP5.54□□□□□ -1.52
SSO1YPL232W UFE1P41834 346 aa5.54□□□□□ -1.52
SSO1YPL232W NRM1P53718 249 aa5.54□□□□□ -1.52
SSO1YPL232W PIR3Q03180 325 aa5.54□□□□□ -1.52
SSO1YPL232W MPC54Q08550 464 aa5.54□□□□□ -1.52
SSO1YPL232W CLP1Q08685 445 aaPredicted RBP5.54□□□□□ -1.52
SSO1YPL232W TCO89Q08921 799 aa5.54□□□□□ -1.52
SSO1YPL232W DDC1Q08949 612 aa5.54□□□□□ -1.52
SSO1YPL232W ELG1Q12050 791 aa5.54□□□□□ -1.52
SSO1YPL232W ENO2P00925 437 aaKnown RBP5.53□□□□□ -1.52
SSO1YPL232W GAL4P04386 881 aa5.53□□□□□ -1.52
SSO1YPL232W PGI1P12709 554 aaKnown RBP5.53□□□□□ -1.52
SSO1YPL232W ERG6P25087 383 aaKnown RBP5.53□□□□□ -1.52
SSO1YPL232W RRT12P25381 491 aa5.53□□□□□ -1.52
SSO1YPL232W SWI3P32591 825 aa5.53□□□□□ -1.52
SSO1YPL232W MRPL40P36534 297 aa5.53□□□□□ -1.52
SSO1YPL232W RFC5P38251 354 aa5.53□□□□□ -1.52
SSO1YPL232W ASG1P40467 964 aa5.53□□□□□ -1.52
SSO1YPL232W CDC1P40986 491 aa5.53□□□□□ -1.52
SSO1YPL232W PEX14P53112 341 aa5.53□□□□□ -1.52
SSO1YPL232W PIL1P53252 339 aaKnown RBP5.53□□□□□ -1.52
SSO1YPL232W TIM8P57744 87 aa5.53□□□□□ -1.52
SSO1YPL232W COG8Q04632 607 aa5.53□□□□□ -1.52
SSO1YPL232W HRD3Q05787 833 aa5.53□□□□□ -1.52
SSO1YPL232W ECM38Q05902 660 aaPredicted RBP5.53□□□□□ -1.52
SSO1YPL232W ABP140Q08641 628 aaKnown RBP5.53□□□□□ -1.52
SSO1YPL232W COX3P00420 269 aa5.52□□□□□ -1.53
SSO1YPL232W STE4P18851 423 aa5.52□□□□□ -1.53
SSO1YPL232W VBA3P25594 458 aa5.52□□□□□ -1.53
SSO1YPL232W YJU3P28321 313 aa5.52□□□□□ -1.53
SSO1YPL232W PMI40P29952 429 aaKnown RBP5.52□□□□□ -1.53
SSO1YPL232W EFB1P32471 206 aaKnown RBP5.52□□□□□ -1.53
SSO1YPL232W XRS2P33301 854 aa5.52□□□□□ -1.53
SSO1YPL232W VBA5P36172 582 aa5.52□□□□□ -1.53
SSO1YPL232W CRP1P38845 465 aaKnown RBP5.52□□□□□ -1.53
SSO1YPL232W LTP1P40347 161 aa5.52□□□□□ -1.53
SSO1YPL232W TBF1Q02457 562 aa5.52□□□□□ -1.53
SSO1YPL232W YMR206WQ03695 313 aa5.52□□□□□ -1.53
SSO1YPL232W YLR456WQ06199 204 aa5.52□□□□□ -1.53
SSO1YPL232W RCL1Q08096 367 aaPredicted RBP5.52□□□□□ -1.53
SSO1YPL232W ALR1Q08269 859 aa5.52□□□□□ -1.53
SSO1YPL232W YOR389WQ08912 624 aa5.52□□□□□ -1.53
SSO1YPL232W YPL278CQ08990 100 aa5.52□□□□□ -1.53
SSO1YPL232W YPL150WQ12152 901 aa5.52□□□□□ -1.53
SSO1YPL232W RNR2P09938 399 aaKnown RBP5.51□□□□□ -1.53
SSO1YPL232W CDC42P19073 191 aa5.51□□□□□ -1.53
SSO1YPL232W COX11P19516 300 aaKnown RBP5.51□□□□□ -1.53
SSO1YPL232W PSY2P40164 858 aa5.51□□□□□ -1.53
SSO1YPL232W AIM23P47015 356 aa5.51□□□□□ -1.53
SSO1YPL232W SUN4P53616 420 aa5.51□□□□□ -1.53
SSO1YPL232W RPA49Q01080 415 aaPredicted RBP5.51□□□□□ -1.53
SSO1YPL232W YPL062WQ02781 134 aa5.51□□□□□ -1.53
SSO1YPL232W YML082WQ04533 649 aaKnown RBP5.51□□□□□ -1.53
SSO1YPL232W LCB5Q06147 687 aaKnown RBP5.51□□□□□ -1.53
SSO1YPL232W YSH1Q06224 779 aaPredicted RBP5.51□□□□□ -1.53
SSO1YPL232W IWR1Q07532 353 aaPredicted RBP5.51□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 22 ms