RNA–Protein interactions for RNA: YPL008W

CHL1, Transcript of Probable DNA helicase, yeastyeast

Gene CHL1, Length 2,586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CHL1YPL008W RIM11P38615 370 aa4.28□□□□□ -1.72
CHL1YPL008W GPB2P39717 880 aa4.28□□□□□ -1.72
CHL1YPL008W FET4P40988 552 aa4.28□□□□□ -1.72
CHL1YPL008W YGL140CP53120 1219 aa4.28□□□□□ -1.72
CHL1YPL008W YLR225CQ05948 407 aaKnown RBP4.28□□□□□ -1.72
CHL1YPL008W STE23Q06010 1027 aa4.28□□□□□ -1.72
CHL1YPL008W SBP1P10080 294 aaKnown RBP4.27□□□□□ -1.73
CHL1YPL008W GFA1P14742 717 aaKnown RBP4.27□□□□□ -1.73
CHL1YPL008W MSH1P25846 959 aa4.27□□□□□ -1.73
CHL1YPL008W SQT1P35184 431 aa4.27□□□□□ -1.73
CHL1YPL008W STV1P37296 890 aa4.27□□□□□ -1.73
CHL1YPL008W SPP381P38282 291 aaPredicted RBP4.27□□□□□ -1.73
CHL1YPL008W UBP5P39944 805 aa4.27□□□□□ -1.73
CHL1YPL008W GPP1P41277 250 aaKnown RBP4.27□□□□□ -1.73
CHL1YPL008W YJR039WP47107 1121 aa4.27□□□□□ -1.73
CHL1YPL008W RRT6P53117 311 aaPredicted RBP4.27□□□□□ -1.73
CHL1YPL008W MDR1P53258 950 aa4.27□□□□□ -1.73
CHL1YPL008W TIM8P57744 87 aa4.27□□□□□ -1.73
CHL1YPL008W SHE9Q04172 456 aa4.27□□□□□ -1.73
CHL1YPL008W YMR114CQ04471 368 aaKnown RBP4.27□□□□□ -1.73
CHL1YPL008W ECI1Q05871 280 aa4.27□□□□□ -1.73
CHL1YPL008W WHI4Q07655 649 aaKnown RBP4.27□□□□□ -1.73
CHL1YPL008W PUF3Q07807 879 aaKnown RBP RIP-Chip data4.27□□□□□ -1.73 RIP-Chip
CHL1YPL008W ZRT2Q12436 422 aa4.27□□□□□ -1.73
CHL1YPL008W CMR1Q12510 522 aaKnown RBP4.27□□□□□ -1.73
CHL1YPL008W FKS1P38631 1876 aaKnown RBP4.27□□□□□ -1.73
CHL1YPL008W GSC2P40989 1895 aa4.27□□□□□ -1.73
CHL1YPL008W CHS2P14180 963 aa4.27□□□□□ -1.73
CHL1YPL008W TUP1P16649 713 aa4.27□□□□□ -1.73
CHL1YPL008W KIP1P28742 1111 aa4.27□□□□□ -1.73
CHL1YPL008W DEP1P31385 405 aa4.27□□□□□ -1.73
CHL1YPL008W PYC2P32327 1180 aaKnown RBP4.27□□□□□ -1.73
CHL1YPL008W MCR1P36060 302 aaKnown RBP4.27□□□□□ -1.73
CHL1YPL008W VPS41P38959 992 aa4.27□□□□□ -1.73
CHL1YPL008W BRE2P43132 505 aa4.27□□□□□ -1.73
CHL1YPL008W NET1P47035 1189 aa4.27□□□□□ -1.73
CHL1YPL008W YDL057WQ07379 328 aa4.27□□□□□ -1.73
CHL1YPL008W YPL216WQ08964 1102 aa4.27□□□□□ -1.73
CHL1YPL008W YLR278CQ05854 1341 aa4.26□□□□□ -1.73
CHL1YPL008W RPS3P05750 240 aaKnown RBP4.26□□□□□ -1.73
CHL1YPL008W DAL7P21826 554 aa4.26□□□□□ -1.73
CHL1YPL008W TRK2P28584 889 aa4.26□□□□□ -1.73
CHL1YPL008W COT1P32798 439 aa4.26□□□□□ -1.73
CHL1YPL008W NAB3P38996 802 aaKnown RBP RIP-Chip data4.26□□□□□ -1.73not detected
CHL1YPL008W NPP2P39997 493 aa4.26□□□□□ -1.73
CHL1YPL008W MMM1P41800 426 aa4.26□□□□□ -1.73
CHL1YPL008W UTP8P53276 713 aaKnown RBP4.26□□□□□ -1.73
CHL1YPL008W NOG1Q02892 647 aaKnown RBP4.26□□□□□ -1.73
CHL1YPL008W TFB2Q02939 513 aa4.26□□□□□ -1.73
CHL1YPL008W YML082WQ04533 649 aaKnown RBP4.26□□□□□ -1.73
CHL1YPL008W CRD1Q07560 283 aa4.26□□□□□ -1.73
CHL1YPL008W RKM4Q12504 494 aa4.26□□□□□ -1.73
CHL1YPL008W HVG1P0CE11 249 aa4.26□□□□□ -1.73
CHL1YPL008W NAT1P12945 854 aaKnown RBP4.26□□□□□ -1.73
CHL1YPL008W APA1P16550 321 aaKnown RBP4.26□□□□□ -1.73
CHL1YPL008W RPC37P36121 282 aa4.26□□□□□ -1.73
CHL1YPL008W TVP38P36164 337 aa4.26□□□□□ -1.73
CHL1YPL008W SET5P38890 526 aaKnown RBP4.26□□□□□ -1.73
CHL1YPL008W IRR1P40541 1150 aa4.26□□□□□ -1.73
CHL1YPL008W MIC19P43594 170 aa4.26□□□□□ -1.73
CHL1YPL008W SQS1P53866 767 aaKnown RBP4.26□□□□□ -1.73
CHL1YPL008W RPA49Q01080 415 aaPredicted RBP4.26□□□□□ -1.73
CHL1YPL008W SLX4Q12098 748 aa4.26□□□□□ -1.73
CHL1YPL008W OSW2Q12202 724 aa4.26□□□□□ -1.73
CHL1YPL008W PHR1P05066 565 aaKnown RBP RIP-Chip data4.25□□□□□ -1.73not detected
CHL1YPL008W UBP11P36026 717 aa4.25□□□□□ -1.73
CHL1YPL008W LAS1P36146 502 aaPredicted RBP4.25□□□□□ -1.73
CHL1YPL008W MMS21P38632 267 aa4.25□□□□□ -1.73
CHL1YPL008W XDJ1P39102 459 aa4.25□□□□□ -1.73
CHL1YPL008W PEA2P40091 420 aa4.25□□□□□ -1.73
CHL1YPL008W YTA12P40341 825 aa4.25□□□□□ -1.73
CHL1YPL008W CTK3P46963 296 aaPredicted RBP4.25□□□□□ -1.73
CHL1YPL008W YML119WQ03208 357 aa4.25□□□□□ -1.73
CHL1YPL008W ATG16Q03818 150 aa4.25□□□□□ -1.73
CHL1YPL008W TMA64Q04600 565 aaKnown RBP4.25□□□□□ -1.73
CHL1YPL008W CDC33P07260 213 aaKnown RBP4.25□□□□□ -1.73
CHL1YPL008W KRS1P15180 591 aaKnown RBP4.25□□□□□ -1.73
CHL1YPL008W VMA2P16140 517 aaKnown RBP4.25□□□□□ -1.73
CHL1YPL008W CLB1P24868 471 aa4.25□□□□□ -1.73
CHL1YPL008W CDC10P25342 322 aaKnown RBP4.25□□□□□ -1.73
CHL1YPL008W RME1P32338 300 aaKnown RBP4.25□□□□□ -1.73
CHL1YPL008W EUG1P32474 517 aa4.25□□□□□ -1.73
CHL1YPL008W TFC4P33339 1025 aa4.25□□□□□ -1.73
CHL1YPL008W TRZ1P36159 838 aaPredicted RBP4.25□□□□□ -1.73
CHL1YPL008W NDT80P38830 627 aa4.25□□□□□ -1.73
CHL1YPL008W GDH3P39708 457 aa4.25□□□□□ -1.73
CHL1YPL008W FTR1P40088 404 aa4.25□□□□□ -1.73
CHL1YPL008W LCB2P40970 561 aa4.25□□□□□ -1.73
CHL1YPL008W DIP5P53388 608 aa4.25□□□□□ -1.73
CHL1YPL008W MTG1Q03151 367 aaPredicted RBP4.25□□□□□ -1.73
CHL1YPL008W DFG5Q05031 458 aa4.25□□□□□ -1.73
CHL1YPL008W MRL1Q06815 381 aa4.25□□□□□ -1.73
CHL1YPL008W HFI1Q12060 488 aa4.25□□□□□ -1.73
CHL1YPL008W MDM12Q92328 271 aa4.25□□□□□ -1.73
CHL1YPL008W RAD1P06777 1100 aa4.24□□□□□ -1.73
CHL1YPL008W ADH4P10127 382 aa4.24□□□□□ -1.73
CHL1YPL008W KAR1P11927 433 aa4.24□□□□□ -1.73
CHL1YPL008W PMS1P14242 873 aa4.24□□□□□ -1.73
CHL1YPL008W PAP1P29468 568 aaKnown RBP4.24□□□□□ -1.73
CHL1YPL008W PLC1P32383 869 aa4.24□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms