RNA–Protein interactions for RNA: YNL186W

UBP10, Transcript of Ubiquitin-specific protease, deubiquitinates Ub-protein moieties, yeast

Gene UBP10, Length 2,379 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP10	YNL186W	RTC1	Q08281	1341 aa		4.6	□□□□□ -1.67
UBP10	YNL186W	SEM1	O94742	89 aa		4.6	□□□□□ -1.67
UBP10	YNL186W	RPP1A	P05318	106 aa	Predicted RBP	4.6	□□□□□ -1.67
UBP10	YNL186W	GLN4	P13188	809 aa	Known RBP	4.6	□□□□□ -1.67
UBP10	YNL186W	KRR1	P25586	316 aa	Predicted RBP	4.6	□□□□□ -1.67
UBP10	YNL186W	YKR018C	P36114	725 aa		4.6	□□□□□ -1.67
UBP10	YNL186W	TAF5	P38129	798 aa		4.6	□□□□□ -1.67
UBP10	YNL186W	LRP1	P38801	184 aa	Known RBP	4.6	□□□□□ -1.67
UBP10	YNL186W	UBP9	P39967	754 aa		4.6	□□□□□ -1.67
UBP10	YNL186W	YER158C	P40095	573 aa		4.6	□□□□□ -1.67
UBP10	YNL186W	ARE2	P53629	642 aa	Known RBP	4.6	□□□□□ -1.67
UBP10	YNL186W	SFB2	P53953	876 aa		4.6	□□□□□ -1.67
UBP10	YNL186W	MRPL13	Q02204	264 aa		4.6	□□□□□ -1.67
UBP10	YNL186W	TAH18	Q12181	623 aa		4.6	□□□□□ -1.67
UBP10	YNL186W	CDC16	P09798	840 aa		4.59	□□□□□ -1.67
UBP10	YNL186W	FUR1	P18562	216 aa	Known RBP	4.59	□□□□□ -1.67
UBP10	YNL186W	UBC1	P21734	215 aa	Known RBP	4.59	□□□□□ -1.67
UBP10	YNL186W	KNS1	P32350	737 aa	Predicted RBP	4.59	□□□□□ -1.67
UBP10	YNL186W	NPL6	P32832	435 aa		4.59	□□□□□ -1.67
UBP10	YNL186W	IFA38	P38286	347 aa		4.59	□□□□□ -1.67
UBP10	YNL186W	SWD1	P39706	426 aa		4.59	□□□□□ -1.67
UBP10	YNL186W	SAW1	P39735	261 aa		4.59	□□□□□ -1.67
UBP10	YNL186W	YER010C	P40011	234 aa		4.59	□□□□□ -1.67
UBP10	YNL186W	IMA5	P40884	581 aa		4.59	□□□□□ -1.67
UBP10	YNL186W	LEM3	P42838	414 aa		4.59	□□□□□ -1.67
UBP10	YNL186W	YML6	P51998	286 aa		4.59	□□□□□ -1.67
UBP10	YNL186W	ZIP2	P53061	704 aa		4.59	□□□□□ -1.67
UBP10	YNL186W	SRT1	Q03175	343 aa		4.59	□□□□□ -1.67
UBP10	YNL186W	YDR286C	Q05530	114 aa		4.59	□□□□□ -1.67
UBP10	YNL186W	UTP21	Q06078	939 aa	Predicted RBP	4.59	□□□□□ -1.67
UBP10	YNL186W	YOR059C	Q08448	450 aa	Known RBP	4.59	□□□□□ -1.67
UBP10	YNL186W	BUG1	Q12191	341 aa		4.59	□□□□□ -1.67
UBP10	YNL186W	NHA1	Q99271	985 aa		4.59	□□□□□ -1.67
UBP10	YNL186W	TY4B-H	P0C2J7	1802 aa		4.59	□□□□□ -1.68
UBP10	YNL186W	TY4B-J	P47024	1803 aa		4.59	□□□□□ -1.68
UBP10	YNL186W	RPC53	P25441	422 aa		4.58	□□□□□ -1.68
UBP10	YNL186W	PGS1	P25578	521 aa		4.58	□□□□□ -1.68
UBP10	YNL186W	NAM7	P30771	971 aa	Known RBP	4.58	□□□□□ -1.68
UBP10	YNL186W	HXT4	P32467	576 aa		4.58	□□□□□ -1.68
UBP10	YNL186W	CBF2	P32504	956 aa		4.58	□□□□□ -1.68
UBP10	YNL186W	PXA2	P34230	853 aa		4.58	□□□□□ -1.68
UBP10	YNL186W	ASH1	P34233	588 aa		4.58	□□□□□ -1.68
UBP10	YNL186W	STL1	P39932	569 aa		4.58	□□□□□ -1.68
UBP10	YNL186W	RPN3	P40016	523 aa	Known RBP	4.58	□□□□□ -1.68
UBP10	YNL186W	SCS2	P40075	244 aa	Known RBP	4.58	□□□□□ -1.68
UBP10	YNL186W	VID28	P40547	921 aa		4.58	□□□□□ -1.68
UBP10	YNL186W	PRP43	P53131	767 aa	Known RBP	4.58	□□□□□ -1.68
UBP10	YNL186W	MTD1	Q02046	320 aa	Known RBP	4.58	□□□□□ -1.68
UBP10	YNL186W	EAR1	Q03212	550 aa		4.58	□□□□□ -1.68
UBP10	YNL186W	SRC1	Q03707	834 aa		4.58	□□□□□ -1.68
UBP10	YNL186W	RPN7	Q06103	429 aa	Known RBP	4.58	□□□□□ -1.68
UBP10	YNL186W	NGL1	Q08213	363 aa	Known RBP	4.58	□□□□□ -1.68
UBP10	YNL186W	YLR149C	Q99296	730 aa		4.58	□□□□□ -1.68
UBP10	YNL186W	MAC1	P35192	417 aa		4.58	□□□□□ -1.68
UBP10	YNL186W	SSZ1	P38788	538 aa	Known RBP	4.58	□□□□□ -1.68
UBP10	YNL186W	LSM5	P40089	93 aa	Known RBP	4.58	□□□□□ -1.68
UBP10	YNL186W	NOG2	P53742	486 aa	Known RBP	4.58	□□□□□ -1.68
UBP10	YNL186W	SSL2	Q00578	843 aa		4.58	□□□□□ -1.68
UBP10	YNL186W	SYF1	Q04048	859 aa	Predicted RBP	4.58	□□□□□ -1.68
UBP10	YNL186W	YRF1-3	P0CX14	1859 aa		4.58	□□□□□ -1.68
UBP10	YNL186W	YRF1-7	P0CX15	1859 aa		4.58	□□□□□ -1.68
UBP10	YNL186W	YRF1-6	P53819	1859 aa		4.58	□□□□□ -1.68
UBP10	YNL186W	APC1	P53886	1748 aa		4.58	□□□□□ -1.68
UBP10	YNL186W	PRP45	P28004	379 aa	Predicted RBP	4.57	□□□□□ -1.68
UBP10	YNL186W	DPH2	P32461	534 aa		4.57	□□□□□ -1.68
UBP10	YNL186W	TGL1	P34163	548 aa		4.57	□□□□□ -1.68
UBP10	YNL186W	RXT2	P38255	430 aa		4.57	□□□□□ -1.68
UBP10	YNL186W	SRP68	P38687	599 aa	Known RBP	4.57	□□□□□ -1.68
UBP10	YNL186W	MEP1	P40260	492 aa		4.57	□□□□□ -1.68
UBP10	YNL186W	AIR1	P40507	360 aa	Known RBP	4.57	□□□□□ -1.68
UBP10	YNL186W	AXL1	P40851	1208 aa		4.57	□□□□□ -1.68
UBP10	YNL186W	YJR039W	P47107	1121 aa		4.57	□□□□□ -1.68
UBP10	YNL186W	GPI8	P49018	411 aa		4.57	□□□□□ -1.68
UBP10	YNL186W	SOK2	P53438	785 aa	Predicted RBP	4.57	□□□□□ -1.68
UBP10	YNL186W	ELA1	P53861	379 aa	Predicted RBP	4.57	□□□□□ -1.68
UBP10	YNL186W	MCH5	Q08777	521 aa		4.57	□□□□□ -1.68
UBP10	YNL186W	RTK1	Q12100	620 aa	Predicted RBP	4.57	□□□□□ -1.68
UBP10	YNL186W	DIF1	O13577	133 aa		4.57	□□□□□ -1.68
UBP10	YNL186W	LEU2	P04173	364 aa	Predicted RBP	4.57	□□□□□ -1.68
UBP10	YNL186W	NUC1	P08466	329 aa		4.57	□□□□□ -1.68
UBP10	YNL186W	ILS1	P09436	1072 aa	Known RBP	4.57	□□□□□ -1.68
UBP10	YNL186W	ERS1	P17261	260 aa		4.57	□□□□□ -1.68
UBP10	YNL186W	SNF5	P18480	905 aa		4.57	□□□□□ -1.68
UBP10	YNL186W	BRF1	P29056	596 aa		4.57	□□□□□ -1.68
UBP10	YNL186W	STT3	P39007	718 aa	Known RBP	4.57	□□□□□ -1.68
UBP10	YNL186W	NPR2	P39923	615 aa		4.57	□□□□□ -1.68
UBP10	YNL186W	DOT5	P40553	215 aa		4.57	□□□□□ -1.68
UBP10	YNL186W	NUP85	P46673	744 aa		4.57	□□□□□ -1.68
UBP10	YNL186W	CTF18	P49956	741 aa		4.57	□□□□□ -1.68
UBP10	YNL186W	LSC2	P53312	427 aa		4.57	□□□□□ -1.68
UBP10	YNL186W	CBK1	P53894	756 aa		4.57	□□□□□ -1.68
UBP10	YNL186W	NOP15	P53927	220 aa	Predicted RBP	4.57	□□□□□ -1.68
UBP10	YNL186W	CTF4	Q01454	927 aa		4.57	□□□□□ -1.68
UBP10	YNL186W	AVO1	Q08236	1176 aa		4.57	□□□□□ -1.68
UBP10	YNL186W	SIR4	P11978	1358 aa		4.56	□□□□□ -1.68
UBP10	YNL186W	MCM3	P24279	971 aa	Known RBP	4.56	□□□□□ -1.68
UBP10	YNL186W	CDC60	P26637	1090 aa	Known RBP	4.56	□□□□□ -1.68
UBP10	YNL186W	BCK2	P33306	851 aa		4.56	□□□□□ -1.68
UBP10	YNL186W	YBR138C	P38277	524 aa		4.56	□□□□□ -1.68
UBP10	YNL186W	YBR225W	P38321	900 aa		4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms