RNA–Protein interactions for RNA: YMR247C

RKR1, Transcript of RING domain E3 ubiquitin ligase, yeastyeast

Gene RKR1, Length 4,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RKR1YMR247C FAP7Q12055 197 aaPredicted RBP1.02□□□□□ -2.25
RKR1YMR247C DED1P06634 604 aaKnown RBP1.01□□□□□ -2.25
RKR1YMR247C TUB1P09733 447 aaKnown RBP1.01□□□□□ -2.25
RKR1YMR247C MSD1P15179 658 aaKnown RBP1.01□□□□□ -2.25
RKR1YMR247C PDE1P22434 369 aa1.01□□□□□ -2.25
RKR1YMR247C PLC1P32383 869 aa1.01□□□□□ -2.25
RKR1YMR247C CUE2P36075 443 aaKnown RBP1.01□□□□□ -2.25
RKR1YMR247C PBP2P38151 413 aaKnown RBP RIP-Chip data1.01□□□□□ -2.25not detected
RKR1YMR247C RIM4P38741 713 aa1.01□□□□□ -2.25
RKR1YMR247C PPE1P38796 400 aa1.01□□□□□ -2.25
RKR1YMR247C SAW1P39735 261 aa1.01□□□□□ -2.25
RKR1YMR247C YTA12P40341 825 aa1.01□□□□□ -2.25
RKR1YMR247C NUP82P40368 713 aa1.01□□□□□ -2.25
RKR1YMR247C NDC80P40460 691 aa1.01□□□□□ -2.25
RKR1YMR247C YIL092WP40497 633 aa1.01□□□□□ -2.25
RKR1YMR247C SSY5P47002 699 aa1.01□□□□□ -2.25
RKR1YMR247C IMO32P53219 342 aa1.01□□□□□ -2.25
RKR1YMR247C IST1P53843 298 aaPredicted RBP1.01□□□□□ -2.25
RKR1YMR247C CRR1Q05790 422 aa1.01□□□□□ -2.25
RKR1YMR247C AAD4Q07747 329 aa1.01□□□□□ -2.25
RKR1YMR247C CHO2P05374 869 aaKnown RBP1.01□□□□□ -2.25
RKR1YMR247C SWI6P09959 803 aa1.01□□□□□ -2.25
RKR1YMR247C HOP1P20050 605 aa1.01□□□□□ -2.25
RKR1YMR247C VPS33P20795 691 aa1.01□□□□□ -2.25
RKR1YMR247C SEC21P32074 935 aaKnown RBP1.01□□□□□ -2.25
RKR1YMR247C ORC2P32833 620 aa1.01□□□□□ -2.25
RKR1YMR247C YKL133CP36066 463 aa1.01□□□□□ -2.25
RKR1YMR247C TDA3P38758 523 aa1.01□□□□□ -2.25
RKR1YMR247C SSZ1P38788 538 aaKnown RBP1.01□□□□□ -2.25
RKR1YMR247C YNG2P38806 282 aaKnown RBP1.01□□□□□ -2.25
RKR1YMR247C MSS4P38994 779 aa1.01□□□□□ -2.25
RKR1YMR247C GPB2P39717 880 aa1.01□□□□□ -2.25
RKR1YMR247C VPS27P40343 622 aaKnown RBP1.01□□□□□ -2.25
RKR1YMR247C SDS3P40505 327 aa1.01□□□□□ -2.25
RKR1YMR247C CFD1P40558 293 aa1.01□□□□□ -2.25
RKR1YMR247C SNM1P40993 198 aa1.01□□□□□ -2.25
RKR1YMR247C YJL163CP46996 555 aa1.01□□□□□ -2.25
RKR1YMR247C HLJ1P48353 224 aa1.01□□□□□ -2.25
RKR1YMR247C COQ6P53318 479 aa1.01□□□□□ -2.25
RKR1YMR247C DCP2P53550 970 aaKnown RBP1.01□□□□□ -2.25
RKR1YMR247C AAT1Q01802 451 aa1.01□□□□□ -2.25
RKR1YMR247C YMR210WQ03649 449 aa1.01□□□□□ -2.25
RKR1YMR247C MUS81Q04149 632 aaPredicted RBP1.01□□□□□ -2.25
RKR1YMR247C YOL073CQ08232 322 aa1.01□□□□□ -2.25
RKR1YMR247C TMA7Q3E764 64 aaKnown RBP1.01□□□□□ -2.25
RKR1YMR247C MLP2P40457 1679 aa1.01□□□□□ -2.25
RKR1YMR247C ESC1Q03661 1658 aaKnown RBP1.01□□□□□ -2.25
RKR1YMR247C TUB3P09734 445 aaKnown RBP1.01□□□□□ -2.25
RKR1YMR247C SSB1P11484 613 aaKnown RBP1.01□□□□□ -2.25
RKR1YMR247C PHO81P17442 1178 aa1.01□□□□□ -2.25
RKR1YMR247C DAL7P21826 554 aa1.01□□□□□ -2.25
RKR1YMR247C DGR2P32330 852 aa1.01□□□□□ -2.25
RKR1YMR247C AFR1P33304 620 aa1.01□□□□□ -2.25
RKR1YMR247C TFC3P34111 1160 aa1.01□□□□□ -2.25
RKR1YMR247C RPF2P36160 344 aaKnown RBP1.01□□□□□ -2.25
RKR1YMR247C SUL1P38359 859 aa1.01□□□□□ -2.25
RKR1YMR247C SSB2P40150 613 aaKnown RBP1.01□□□□□ -2.25
RKR1YMR247C YJR061WP40355 935 aa1.01□□□□□ -2.25
RKR1YMR247C IES1P43579 692 aa1.01□□□□□ -2.25
RKR1YMR247C BIT61P47041 543 aa1.01□□□□□ -2.25
RKR1YMR247C FHN1P53279 174 aa1.01□□□□□ -2.25
RKR1YMR247C SFB2P53953 876 aa1.01□□□□□ -2.25
RKR1YMR247C UME1Q03010 460 aa1.01□□□□□ -2.25
RKR1YMR247C ARA2Q04212 335 aa1.01□□□□□ -2.25
RKR1YMR247C SWF1Q04629 336 aa1.01□□□□□ -2.25
RKR1YMR247C YLR225CQ05948 407 aaKnown RBP1.01□□□□□ -2.25
RKR1YMR247C YLR001CQ07895 862 aa1.01□□□□□ -2.25
RKR1YMR247C UTP10P42945 1769 aaKnown RBP1.01□□□□□ -2.25
RKR1YMR247C CHD1P32657 1468 aa1.01□□□□□ -2.25
RKR1YMR247C TUP1P16649 713 aa1.01□□□□□ -2.25
RKR1YMR247C KIN3P22209 435 aa1.01□□□□□ -2.25
RKR1YMR247C PET309P32522 965 aaPredicted RBP1.01□□□□□ -2.25
RKR1YMR247C ABD1P32783 436 aaPredicted RBP1.01□□□□□ -2.25
RKR1YMR247C MBP1P39678 833 aa1.01□□□□□ -2.25
RKR1YMR247C RTS2P40962 232 aa1.01□□□□□ -2.25
RKR1YMR247C TAD1P53065 400 aa1.01□□□□□ -2.25
RKR1YMR247C SPR28Q04921 423 aa1.01□□□□□ -2.25
RKR1YMR247C SDH5Q08230 162 aa1.01□□□□□ -2.25
RKR1YMR247C SLX4Q12098 748 aa1.01□□□□□ -2.25
RKR1YMR247C DYN1P36022 4092 aa1.01□□□□□ -2.25
RKR1YMR247C PGK1P00560 416 aaKnown RBP1□□□□□ -2.25
RKR1YMR247C ILS1P09436 1072 aaKnown RBP1□□□□□ -2.25
RKR1YMR247C ADE2P21264 571 aaKnown RBP1□□□□□ -2.25
RKR1YMR247C SRM1P21827 482 aa1□□□□□ -2.25
RKR1YMR247C DBP2P24783 546 aaKnown RBP1□□□□□ -2.25
RKR1YMR247C YUR1P26725 428 aa1□□□□□ -2.25
RKR1YMR247C MF(ALPHA)2P32435 120 aa1□□□□□ -2.25
RKR1YMR247C RPT3P33298 428 aaKnown RBP1□□□□□ -2.25
RKR1YMR247C AKL1P38080 1108 aaKnown RBP1□□□□□ -2.25
RKR1YMR247C RRP3P38712 501 aaKnown RBP1□□□□□ -2.25
RKR1YMR247C ETP1P38748 585 aaKnown RBP1□□□□□ -2.25
RKR1YMR247C FSH1P38777 243 aaKnown RBP1□□□□□ -2.25
RKR1YMR247C TPA1P40032 644 aaKnown RBP1□□□□□ -2.25
RKR1YMR247C ASG1P40467 964 aa1□□□□□ -2.25
RKR1YMR247C VHR1P40522 640 aa1□□□□□ -2.25
RKR1YMR247C PFA3P42836 336 aa1□□□□□ -2.25
RKR1YMR247C DNM1P54861 757 aa1□□□□□ -2.25
RKR1YMR247C MAP1Q01662 387 aaKnown RBP RIP-Chip data1□□□□□ -2.25not detected
RKR1YMR247C PLB2Q03674 706 aa1□□□□□ -2.25
RKR1YMR247C USA1Q03714 838 aa1□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 49 ms