RNA–Protein interactions for RNA: YLR423C

ATG17, Transcript of Scaffold protein responsible for phagophore assembly site organization, yeastyeast

Gene ATG17, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG17YLR423C PRP22P24384 1145 aaKnown RBP7.59□□□□□ -1.19
ATG17YLR423C NAB3P38996 802 aaKnown RBP RIP-Chip data7.59□□□□□ -1.19not detected
ATG17YLR423C IRC5P43610 853 aa7.59□□□□□ -1.19
ATG17YLR423C RIM8P53179 542 aa7.59□□□□□ -1.19
ATG17YLR423C TMA10Q06177 86 aa7.59□□□□□ -1.19
ATG17YLR423C ECM3Q99252 613 aa7.59□□□□□ -1.19
ATG17YLR423C MSH1P25846 959 aa7.58□□□□□ -1.2
ATG17YLR423C TEX1P53851 422 aaKnown RBP7.58□□□□□ -1.2
ATG17YLR423C SQS1P53866 767 aaKnown RBP7.58□□□□□ -1.2
ATG17YLR423C TEP1P53916 434 aa7.58□□□□□ -1.2
ATG17YLR423C CEG1Q01159 459 aaPredicted RBP7.58□□□□□ -1.2
ATG17YLR423C RCR2Q03446 210 aaKnown RBP7.58□□□□□ -1.2
ATG17YLR423C NSE5Q03718 556 aa7.58□□□□□ -1.2
ATG17YLR423C VPS36Q06696 566 aa7.58□□□□□ -1.2
ATG17YLR423C MSS18P08593 268 aa7.57□□□□□ -1.2
ATG17YLR423C APA1P16550 321 aaKnown RBP7.57□□□□□ -1.2
ATG17YLR423C TGL1P34163 548 aa7.57□□□□□ -1.2
ATG17YLR423C TOD6P34219 525 aa7.57□□□□□ -1.2
ATG17YLR423C TAF5P38129 798 aa7.57□□□□□ -1.2
ATG17YLR423C ACA1P39970 489 aa7.57□□□□□ -1.2
ATG17YLR423C MRPS35P53292 345 aa7.57□□□□□ -1.2
ATG17YLR423C PSR2Q07949 397 aa7.57□□□□□ -1.2
ATG17YLR423C IME1P21190 360 aa7.56□□□□□ -1.2
ATG17YLR423C KIN82P25341 720 aa7.56□□□□□ -1.2
ATG17YLR423C DBF20P32328 564 aa7.56□□□□□ -1.2
ATG17YLR423C SCS2P40075 244 aaKnown RBP7.56□□□□□ -1.2
ATG17YLR423C SAP185P40856 1058 aa7.56□□□□□ -1.2
ATG17YLR423C BUD8P41698 603 aa7.56□□□□□ -1.2
ATG17YLR423C HMO1Q03973 246 aaKnown RBP7.56□□□□□ -1.2
ATG17YLR423C YDL121CQ07541 149 aa7.56□□□□□ -1.2
ATG17YLR423C ENB1Q08299 606 aa7.56□□□□□ -1.2
ATG17YLR423C ARP7Q12406 477 aa7.56□□□□□ -1.2
ATG17YLR423C SEC18P18759 758 aaKnown RBP7.55□□□□□ -1.2
ATG17YLR423C PET309P32522 965 aaPredicted RBP7.55□□□□□ -1.2
ATG17YLR423C SSP120P39931 234 aaKnown RBP7.55□□□□□ -1.2
ATG17YLR423C NOP9P47077 666 aaKnown RBP7.55□□□□□ -1.2
ATG17YLR423C MCH5Q08777 521 aa7.55□□□□□ -1.2
ATG17YLR423C VPS5Q92331 675 aa7.55□□□□□ -1.2
ATG17YLR423C MET3P08536 511 aa7.54□□□□□ -1.2
ATG17YLR423C ERG6P25087 383 aaKnown RBP7.54□□□□□ -1.2
ATG17YLR423C LST4P34239 828 aa7.54□□□□□ -1.2
ATG17YLR423C TSA1P34760 196 aaKnown RBP7.54□□□□□ -1.2
ATG17YLR423C BIT61P47041 543 aa7.54□□□□□ -1.2
ATG17YLR423C MDR1P53258 950 aa7.54□□□□□ -1.2
ATG17YLR423C CDA2Q06703 312 aa7.54□□□□□ -1.2
ATG17YLR423C POM34Q12445 299 aa7.54□□□□□ -1.2
ATG17YLR423C ATG11Q12527 1178 aa7.54□□□□□ -1.2
ATG17YLR423C HRP1Q99383 534 aaKnown RBP7.54□□□□□ -1.2
ATG17YLR423C VAS1P07806 1104 aaKnown RBP7.53□□□□□ -1.2
ATG17YLR423C YIR042CP40586 236 aa7.53□□□□□ -1.2
ATG17YLR423C AMA1P50082 593 aa7.53□□□□□ -1.2
ATG17YLR423C MCM6P53091 1017 aaKnown RBP7.53□□□□□ -1.2
ATG17YLR423C SPO1P53541 631 aa7.53□□□□□ -1.2
ATG17YLR423C DLT1Q04216 342 aa7.53□□□□□ -1.2
ATG17YLR423C HLR1Q04429 423 aa7.53□□□□□ -1.2
ATG17YLR423C YLR358CO13565 187 aa7.52□□□□□ -1.21
ATG17YLR423C CAF20P12962 161 aaKnown RBP7.52□□□□□ -1.21
ATG17YLR423C CBP3P21560 335 aa7.52□□□□□ -1.21
ATG17YLR423C APM3P38153 483 aa7.52□□□□□ -1.21
ATG17YLR423C CCT3P39077 534 aaKnown RBP7.52□□□□□ -1.21
ATG17YLR423C MTL1P53214 551 aa7.52□□□□□ -1.21
ATG17YLR423C HOS1Q12214 470 aa7.52□□□□□ -1.21
ATG17YLR423C LAT1P12695 482 aaKnown RBP7.51□□□□□ -1.21
ATG17YLR423C STE11P23561 717 aa7.51□□□□□ -1.21
ATG17YLR423C PPE1P38796 400 aa7.51□□□□□ -1.21
ATG17YLR423C MNN10P50108 393 aaKnown RBP7.51□□□□□ -1.21
ATG17YLR423C BRE1Q07457 700 aaKnown RBP7.51□□□□□ -1.21
ATG17YLR423C ADH4P10127 382 aa7.5□□□□□ -1.21
ATG17YLR423C PRP6P19735 899 aaPredicted RBP7.5□□□□□ -1.21
ATG17YLR423C PRE10P21242 288 aaKnown RBP RIP-Chip data7.5□□□□□ -1.21not detected
ATG17YLR423C MSM1P22438 575 aa7.5□□□□□ -1.21
ATG17YLR423C PEX1P24004 1043 aa7.5□□□□□ -1.21
ATG17YLR423C PRE4P30657 266 aa7.5□□□□□ -1.21
ATG17YLR423C SWD1P39706 426 aa7.5□□□□□ -1.21
ATG17YLR423C GET2P40056 285 aa7.5□□□□□ -1.21
ATG17YLR423C IML2P47031 731 aa7.5□□□□□ -1.21
ATG17YLR423C MUP1P50276 574 aa7.5□□□□□ -1.21
ATG17YLR423C MNT2P53059 558 aa7.5□□□□□ -1.21
ATG17YLR423C MOT3P54785 490 aaKnown RBP7.5□□□□□ -1.21
ATG17YLR423C BLS1Q06071 122 aa7.5□□□□□ -1.21
ATG17YLR423C RTK1Q12100 620 aaPredicted RBP7.5□□□□□ -1.21
ATG17YLR423C NKP1Q12493 238 aa7.5□□□□□ -1.21
ATG17YLR423C CWH43P25618 953 aa7.49□□□□□ -1.21
ATG17YLR423C SSH4P32343 579 aa7.49□□□□□ -1.21
ATG17YLR423C EXO84P38261 753 aa7.49□□□□□ -1.21
ATG17YLR423C ELO3P40319 345 aa7.49□□□□□ -1.21
ATG17YLR423C PRM2P40534 656 aa7.49□□□□□ -1.21
ATG17YLR423C MAD3P47074 515 aa7.49□□□□□ -1.21
ATG17YLR423C PEF1P53238 335 aa7.49□□□□□ -1.21
ATG17YLR423C AIM41Q12032 185 aa7.49□□□□□ -1.21
ATG17YLR423C TRP4P07285 380 aaPredicted RBP7.48□□□□□ -1.21
ATG17YLR423C HMG2P12684 1045 aa7.48□□□□□ -1.21
ATG17YLR423C MVD1P32377 396 aaKnown RBP7.48□□□□□ -1.21
ATG17YLR423C YPT7P32939 208 aa7.48□□□□□ -1.21
ATG17YLR423C NUP60P39705 539 aa7.48□□□□□ -1.21
ATG17YLR423C PIG2P40187 538 aa7.48□□□□□ -1.21
ATG17YLR423C PUS4P48567 403 aaKnown RBP7.48□□□□□ -1.21
ATG17YLR423C DBP10Q12389 995 aaKnown RBP7.48□□□□□ -1.21
ATG17YLR423C LYS9P38999 446 aa7.47□□□□□ -1.21
ATG17YLR423C YIL077CP40508 320 aa7.47□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 35.8 ms