RNA–Protein interactions for RNA: YKR072C

SIS2, Transcript of Negative regulatory subunit of protein phosphatase 1 (Ppz1p), yeast

Gene SIS2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIS2	YKR072C	TEF4	P36008	412 aa	Known RBP	5.4	□□□□□ -1.54
SIS2	YKR072C	YKR051W	P36142	418 aa		5.4	□□□□□ -1.54
SIS2	YKR072C	STT3	P39007	718 aa	Known RBP	5.4	□□□□□ -1.54
SIS2	YKR072C	YER158C	P40095	573 aa		5.4	□□□□□ -1.54
SIS2	YKR072C	PCL7	P40186	285 aa		5.4	□□□□□ -1.54
SIS2	YKR072C	NEO1	P40527	1151 aa		5.4	□□□□□ -1.54
SIS2	YKR072C	SHR5	P41912	237 aa		5.4	□□□□□ -1.54
SIS2	YKR072C	YFL052W	P43551	465 aa		5.4	□□□□□ -1.54
SIS2	YKR072C	NUP85	P46673	744 aa		5.4	□□□□□ -1.54
SIS2	YKR072C	YNR061C	P53747	219 aa		5.4	□□□□□ -1.54
SIS2	YKR072C	SFB2	P53953	876 aa		5.4	□□□□□ -1.54
SIS2	YKR072C	SSL2	Q00578	843 aa		5.4	□□□□□ -1.54
SIS2	YKR072C	CDC45	Q08032	650 aa		5.4	□□□□□ -1.54
SIS2	YKR072C	HAL9	Q12180	1030 aa		5.4	□□□□□ -1.54
SIS2	YKR072C	YBR182C-A	Q8TGU6	64 aa		5.4	□□□□□ -1.54
SIS2	YKR072C	QCR6	P00127	147 aa		5.4	□□□□□ -1.55
SIS2	YKR072C	ARG82	P07250	355 aa		5.4	□□□□□ -1.55
SIS2	YKR072C	CBP3	P21560	335 aa		5.4	□□□□□ -1.55
SIS2	YKR072C	SEC21	P32074	935 aa	Known RBP	5.4	□□□□□ -1.55
SIS2	YKR072C	SLA2	P33338	968 aa		5.4	□□□□□ -1.55
SIS2	YKR072C	YKR075C	P36155	307 aa		5.4	□□□□□ -1.55
SIS2	YKR072C	ESL2	P36168	1195 aa		5.4	□□□□□ -1.55
SIS2	YKR072C	SSP120	P39931	234 aa	Known RBP	5.4	□□□□□ -1.55
SIS2	YKR072C	YEL025C	P39991	1188 aa		5.4	□□□□□ -1.55
SIS2	YKR072C	PRM2	P40534	656 aa		5.4	□□□□□ -1.55
SIS2	YKR072C	VID28	P40547	921 aa		5.4	□□□□□ -1.55
SIS2	YKR072C	AAD14	P42884	376 aa		5.4	□□□□□ -1.55
SIS2	YKR072C	YML119W	Q03208	357 aa		5.4	□□□□□ -1.55
SIS2	YKR072C	HAS1	Q03532	505 aa	Known RBP	5.4	□□□□□ -1.55
SIS2	YKR072C	YDL073W	Q07454	984 aa		5.4	□□□□□ -1.55
SIS2	YKR072C	IWR1	Q07532	353 aa	Predicted RBP	5.4	□□□□□ -1.55
SIS2	YKR072C	YLL058W	Q12198	575 aa		5.4	□□□□□ -1.55
SIS2	YKR072C	SKM1	Q12469	655 aa		5.4	□□□□□ -1.55
SIS2	YKR072C	HSL1	P34244	1518 aa		5.4	□□□□□ -1.55
SIS2	YKR072C	GLN4	P13188	809 aa	Known RBP	5.39	□□□□□ -1.55
SIS2	YKR072C	POL3	P15436	1097 aa		5.39	□□□□□ -1.55
SIS2	YKR072C	BET2	P20133	325 aa		5.39	□□□□□ -1.55
SIS2	YKR072C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	5.39	□□□□□ -1.55	RIP-Chip
SIS2	YKR072C	GPI10	P30777	616 aa		5.39	□□□□□ -1.55
SIS2	YKR072C	HXT4	P32467	576 aa		5.39	□□□□□ -1.55
SIS2	YKR072C	YKR018C	P36114	725 aa		5.39	□□□□□ -1.55
SIS2	YKR072C	REI1	P38344	393 aa	Predicted RBP	5.39	□□□□□ -1.55
SIS2	YKR072C	QNS1	P38795	714 aa	Known RBP	5.39	□□□□□ -1.55
SIS2	YKR072C	RTT105	P40063	208 aa		5.39	□□□□□ -1.55
SIS2	YKR072C	VTC4	P47075	721 aa		5.39	□□□□□ -1.55
SIS2	YKR072C	YKE2	P52553	114 aa		5.39	□□□□□ -1.55
SIS2	YKR072C	HST1	P53685	503 aa		5.39	□□□□□ -1.55
SIS2	YKR072C	LRS4	Q04087	347 aa	Known RBP	5.39	□□□□□ -1.55
SIS2	YKR072C	NFI1	Q12216	726 aa		5.39	□□□□□ -1.55
SIS2	YKR072C	NSI1	Q12457	570 aa		5.39	□□□□□ -1.55
SIS2	YKR072C	YCK2	P23292	546 aa	Known RBP	5.38	□□□□□ -1.55
SIS2	YKR072C	STE50	P25344	346 aa		5.38	□□□□□ -1.55
SIS2	YKR072C	YCL002C	P25565	263 aa		5.38	□□□□□ -1.55
SIS2	YKR072C	SRO9	P25567	434 aa	Known RBP	5.38	□□□□□ -1.55
SIS2	YKR072C	DGR2	P32330	852 aa		5.38	□□□□□ -1.55
SIS2	YKR072C	PUP2	P32379	260 aa		5.38	□□□□□ -1.55
SIS2	YKR072C	DEF1	P35732	738 aa	Known RBP	5.38	□□□□□ -1.55
SIS2	YKR072C	MDE1	P47095	244 aa		5.38	□□□□□ -1.55
SIS2	YKR072C	GCV1	P48015	400 aa		5.38	□□□□□ -1.55
SIS2	YKR072C	OGG1	P53397	376 aa	Predicted RBP	5.38	□□□□□ -1.55
SIS2	YKR072C	CRR1	Q05790	422 aa		5.38	□□□□□ -1.55
SIS2	YKR072C	YLR345W	Q06137	509 aa		5.38	□□□□□ -1.55
SIS2	YKR072C	YLH47	Q06493	454 aa		5.38	□□□□□ -1.55
SIS2	YKR072C	HUA2	Q12134	243 aa		5.38	□□□□□ -1.55
SIS2	YKR072C	PDH1	Q12428	516 aa	Known RBP	5.38	□□□□□ -1.55
SIS2	YKR072C	SEC53	P07283	254 aa	Known RBP	5.37	□□□□□ -1.55
SIS2	YKR072C	CDC4	P07834	779 aa		5.37	□□□□□ -1.55
SIS2	YKR072C	YEL076C-A	P0CX16	216 aa		5.37	□□□□□ -1.55
SIS2	YKR072C	YLR464W	P0CX17	216 aa		5.37	□□□□□ -1.55
SIS2	YKR072C	CDC26	P14724	124 aa		5.37	□□□□□ -1.55
SIS2	YKR072C	SIR1	P21691	654 aa		5.37	□□□□□ -1.55
SIS2	YKR072C	RFA1	P22336	621 aa	Known RBP	5.37	□□□□□ -1.55
SIS2	YKR072C	LCB1	P25045	558 aa	Known RBP	5.37	□□□□□ -1.55
SIS2	YKR072C	IME2	P32581	645 aa		5.37	□□□□□ -1.55
SIS2	YKR072C	SAP190	P36123	1033 aa		5.37	□□□□□ -1.55
SIS2	YKR072C	YEL076C	P39971	216 aa		5.37	□□□□□ -1.55
SIS2	YKR072C	LTP1	P40347	161 aa		5.37	□□□□□ -1.55
SIS2	YKR072C	DUO1	P53168	247 aa	Known RBP	5.37	□□□□□ -1.55
SIS2	YKR072C	NOP15	P53927	220 aa	Predicted RBP	5.37	□□□□□ -1.55
SIS2	YKR072C	GPD1	Q00055	391 aa	Known RBP	5.37	□□□□□ -1.55
SIS2	YKR072C	HOT1	Q03213	719 aa		5.37	□□□□□ -1.55
SIS2	YKR072C	AVO1	Q08236	1176 aa		5.37	□□□□□ -1.55
SIS2	YKR072C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	5.37	□□□□□ -1.55	not detected
SIS2	YKR072C	APL4	Q12028	832 aa		5.37	□□□□□ -1.55
SIS2	YKR072C	PRP22	P24384	1145 aa	Known RBP	5.37	□□□□□ -1.55
SIS2	YKR072C	DLD1	P32891	587 aa		5.37	□□□□□ -1.55
SIS2	YKR072C	RMA1	P36001	430 aa	Known RBP	5.37	□□□□□ -1.55
SIS2	YKR072C	UGA2	P38067	497 aa		5.37	□□□□□ -1.55
SIS2	YKR072C	YBR138C	P38277	524 aa		5.37	□□□□□ -1.55
SIS2	YKR072C	SET5	P38890	526 aa	Known RBP	5.37	□□□□□ -1.55
SIS2	YKR072C	LCB2	P40970	561 aa		5.37	□□□□□ -1.55
SIS2	YKR072C	CIT3	P43635	486 aa		5.37	□□□□□ -1.55
SIS2	YKR072C	YJL055W	P47044	245 aa		5.37	□□□□□ -1.55
SIS2	YKR072C	YJR039W	P47107	1121 aa		5.37	□□□□□ -1.55
SIS2	YKR072C	ENP2	P48234	707 aa	Known RBP	5.37	□□□□□ -1.55
SIS2	YKR072C	FOL2	P51601	243 aa	Known RBP	5.37	□□□□□ -1.55
SIS2	YKR072C	PIL1	P53252	339 aa	Known RBP	5.37	□□□□□ -1.55
SIS2	YKR072C	VPS75	P53853	264 aa		5.37	□□□□□ -1.55
SIS2	YKR072C	NBP2	Q12163	236 aa		5.37	□□□□□ -1.55
SIS2	YKR072C	SPT6	P23615	1451 aa	Known RBP	5.36	□□□□□ -1.55

Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms