RNA–Protein interactions for RNA: YKR036C

CAF4, Transcript of WD40 repeat-containing protein associated with the CCR4-NOT complex, yeastyeast

Gene CAF4, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF4YKR036C PLC1P32383 869 aa5.06□□□□□ -1.6
CAF4YKR036C HIR2P32480 875 aa5.06□□□□□ -1.6
CAF4YKR036C DUR3P33413 735 aa5.06□□□□□ -1.6
CAF4YKR036C TPO5P36029 618 aa5.06□□□□□ -1.6
CAF4YKR036C UIP5P36137 443 aa5.06□□□□□ -1.6
CAF4YKR036C CRG1P38892 291 aaRIP-Chip data5.06□□□□□ -1.6not detected
CAF4YKR036C PIK1P39104 1066 aa5.06□□□□□ -1.6
CAF4YKR036C MET18P40469 1032 aa5.06□□□□□ -1.6
CAF4YKR036C YJR107WP47145 328 aa5.06□□□□□ -1.6
CAF4YKR036C USE1P53146 245 aa5.06□□□□□ -1.6
CAF4YKR036C SRL4Q03085 281 aa5.06□□□□□ -1.6
CAF4YKR036C FIN1Q03898 291 aa5.06□□□□□ -1.6
CAF4YKR036C EST2Q06163 884 aa5.06□□□□□ -1.6
CAF4YKR036C UIP4Q08926 304 aa5.06□□□□□ -1.6
CAF4YKR036C RKM1Q08961 583 aaPredicted RBP5.06□□□□□ -1.6
CAF4YKR036C TIP41Q12199 356 aa5.06□□□□□ -1.6
CAF4YKR036C YBL113CQ7M4S9 792 aa5.06□□□□□ -1.6
CAF4YKR036C YPT6Q99260 215 aa5.06□□□□□ -1.6
CAF4YKR036C NUC1P08466 329 aa5.05□□□□□ -1.6
CAF4YKR036C PEP5P12868 1029 aa5.05□□□□□ -1.6
CAF4YKR036C MRM1P25270 412 aa5.05□□□□□ -1.6
CAF4YKR036C HES1P35843 434 aa5.05□□□□□ -1.6
CAF4YKR036C UBP13P38187 747 aa5.05□□□□□ -1.6
CAF4YKR036C YJR054WP47114 497 aa5.05□□□□□ -1.6
CAF4YKR036C DRN1P53255 507 aaKnown RBP5.05□□□□□ -1.6
CAF4YKR036C SOL4P53315 255 aa5.05□□□□□ -1.6
CAF4YKR036C BRE5P53741 515 aaKnown RBP5.05□□□□□ -1.6
CAF4YKR036C TOF1P53840 1238 aa5.05□□□□□ -1.6
CAF4YKR036C PTA1Q01329 785 aaPredicted RBP5.05□□□□□ -1.6
CAF4YKR036C TFB3Q03290 321 aa5.05□□□□□ -1.6
CAF4YKR036C FUS2Q05670 677 aa5.05□□□□□ -1.6
CAF4YKR036C SKG3Q06315 1026 aa5.05□□□□□ -1.6
CAF4YKR036C YDL114WQ07530 308 aa5.05□□□□□ -1.6
CAF4YKR036C SSF2Q12153 453 aaPredicted RBP5.05□□□□□ -1.6
CAF4YKR036C ILV2P07342 687 aaKnown RBP5.05□□□□□ -1.6
CAF4YKR036C POL30P15873 258 aaKnown RBP5.05□□□□□ -1.6
CAF4YKR036C MRPL25P23369 157 aa5.05□□□□□ -1.6
CAF4YKR036C ACH1P32316 526 aa5.05□□□□□ -1.6
CAF4YKR036C GYP6P32806 458 aa5.05□□□□□ -1.6
CAF4YKR036C RGT1P32862 1170 aa5.05□□□□□ -1.6
CAF4YKR036C SMC1P32908 1225 aa5.05□□□□□ -1.6
CAF4YKR036C RER2P35196 286 aa5.05□□□□□ -1.6
CAF4YKR036C PGM2P37012 569 aaKnown RBP5.05□□□□□ -1.6
CAF4YKR036C AVT6P40074 448 aa5.05□□□□□ -1.6
CAF4YKR036C DAK2P43550 591 aa5.05□□□□□ -1.6
CAF4YKR036C MIG2P53035 382 aa5.05□□□□□ -1.6
CAF4YKR036C TAF6P53040 516 aa5.05□□□□□ -1.6
CAF4YKR036C MRM2P53123 320 aa5.05□□□□□ -1.6
CAF4YKR036C DCP2P53550 970 aaKnown RBP5.05□□□□□ -1.6
CAF4YKR036C RSM28Q03430 361 aa5.05□□□□□ -1.6
CAF4YKR036C TDA9Q04545 1251 aa5.05□□□□□ -1.6
CAF4YKR036C DCS1Q06151 350 aa5.05□□□□□ -1.6
CAF4YKR036C SPO75Q07798 868 aa5.05□□□□□ -1.6
CAF4YKR036C RAD61Q99359 647 aa5.05□□□□□ -1.6
CAF4YKR036C TAO3P40468 2376 aa5.05□□□□□ -1.6
CAF4YKR036C CDC19P00549 500 aaKnown RBP5.04□□□□□ -1.6
CAF4YKR036C PGK1P00560 416 aaKnown RBP5.04□□□□□ -1.6
CAF4YKR036C HIS4P00815 799 aaKnown RBP5.04□□□□□ -1.6
CAF4YKR036C SEC15P22224 910 aa5.04□□□□□ -1.6
CAF4YKR036C KIP2P28743 706 aa5.04□□□□□ -1.6
CAF4YKR036C VPS21P36017 210 aaKnown RBP5.04□□□□□ -1.6
CAF4YKR036C MET1P36150 593 aa5.04□□□□□ -1.6
CAF4YKR036C MAP2P38174 421 aaKnown RBP5.04□□□□□ -1.6
CAF4YKR036C IFA38P38286 347 aa5.04□□□□□ -1.6
CAF4YKR036C YMR147WP40218 223 aaKnown RBP5.04□□□□□ -1.6
CAF4YKR036C ATG36P46983 293 aa5.04□□□□□ -1.6
CAF4YKR036C BNA3P47039 444 aaKnown RBP5.04□□□□□ -1.6
CAF4YKR036C SPC105P53148 917 aa5.04□□□□□ -1.6
CAF4YKR036C RIM8P53179 542 aa5.04□□□□□ -1.6
CAF4YKR036C YGR016WP53209 190 aa5.04□□□□□ -1.6
CAF4YKR036C MMT1Q03218 510 aa5.04□□□□□ -1.6
CAF4YKR036C YMR187CQ03236 431 aa5.04□□□□□ -1.6
CAF4YKR036C KAR5Q04746 504 aa5.04□□□□□ -1.6
CAF4YKR036C DUS4Q06063 367 aa5.04□□□□□ -1.6
CAF4YKR036C SGO1Q08490 590 aa5.04□□□□□ -1.6
CAF4YKR036C RTT10Q08924 1013 aa5.04□□□□□ -1.6
CAF4YKR036C TFB4Q12004 338 aa5.04□□□□□ -1.6
CAF4YKR036C AIM41Q12032 185 aa5.04□□□□□ -1.6
CAF4YKR036C MAM3Q12296 706 aa5.04□□□□□ -1.6
CAF4YKR036C PDE2P06776 526 aa5.03□□□□□ -1.6
CAF4YKR036C PET494P07390 489 aaPredicted RBP5.03□□□□□ -1.6
CAF4YKR036C YML002WP0CF17 737 aa5.03□□□□□ -1.6
CAF4YKR036C HSF1P10961 833 aa5.03□□□□□ -1.6
CAF4YKR036C ATR1P13090 542 aa5.03□□□□□ -1.6
CAF4YKR036C YCR016WP25617 290 aaKnown RBP5.03□□□□□ -1.6
CAF4YKR036C SEC6P32844 805 aa5.03□□□□□ -1.6
CAF4YKR036C ECM2P38241 364 aaKnown RBP5.03□□□□□ -1.6
CAF4YKR036C RCK2P38623 610 aa5.03□□□□□ -1.6
CAF4YKR036C AFG3P39925 761 aa5.03□□□□□ -1.6
CAF4YKR036C DPH1P40487 425 aaKnown RBP5.03□□□□□ -1.6
CAF4YKR036C SNL1P40548 159 aa5.03□□□□□ -1.6
CAF4YKR036C MMM1P41800 426 aa5.03□□□□□ -1.6
CAF4YKR036C DIM1P41819 318 aaKnown RBP5.03□□□□□ -1.6
CAF4YKR036C DAN4P47179 1161 aa5.03□□□□□ -1.6
CAF4YKR036C FMN1Q03778 218 aa5.03□□□□□ -1.6
CAF4YKR036C SMP3Q04174 516 aa5.03□□□□□ -1.6
CAF4YKR036C TAH18Q12181 623 aa5.03□□□□□ -1.6
CAF4YKR036C KIN2P13186 1147 aaKnown RBP5.03□□□□□ -1.6
CAF4YKR036C MSS116P15424 664 aaKnown RBP5.03□□□□□ -1.6
CAF4YKR036C URE2P23202 354 aaKnown RBP5.03□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms